Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu058858.1 Olea europaea HOM05D006104 ORTHO05D008303 1.7e-180 636.0 329 100.0
Sopen02g011830 Solanum pennellii HOM05D006104 ORTHO05D008303 1.5e-144 516.5 325 80.0
Nitab4.5_0008083g0020 Nicotiana tabacum HOM05D006104 ORTHO05D008303 1.9e-144 516.2 322 80.4
Solyc02g036470.4 Solanum lycopersicum HOM05D006104 ORTHO05D008303 4.3e-144 515.0 330 78.8
PGSC0003DMG400021455 Solanum tuberosum HOM05D006104 ORTHO05D008303 4.3e-144 515.0 330 78.8
MSTRG.15618 Avicennia marina HOM05D006104 ORTHO05D008303 7.3e-144 514.2 324 79.9
Nitab4.5_0002297g0090 Nicotiana tabacum HOM05D006104 ORTHO05D008303 3.6e-143 511.9 298 84.6
SGA_v2.0_scaffold199G41251 Striga asiatica HOM05D006104 ORTHO05D008303 3.6e-143 511.9 324 80.6
Dinv19095 Davidia involucrata HOM05D006104 ORTHO05D008303 1.4e-142 510.0 300 83.7
Migut.K01201 Erythranthe guttata HOM05D006104 ORTHO05D008303 2.3e-142 509.2 325 80.6
Peaxi162Scf00784g00028 Petunia axillaris HOM05D006104 ORTHO05D008303 1.2e-141 506.9 327 78.6
Rhsim10G0186700 Rhododendron simsii HOM05D006104 ORTHO05D008303 9.2e-139 497.3 324 78.1
DCAR_003391 Daucus carota HOM05D006104 ORTHO05D008303 1.9e-136 489.6 296 79.4
CiPaw.03G009900 Carya illinoinensis HOM05D006104 ORTHO05D008303 3.3e-136 488.8 300 79.7
arahy.Tifrunner.gnm1.ann1.W9ZMNH Arachis hypogaea HOM05D006104 ORTHO05D008303 4.3e-136 488.4 296 80.7
arahy.Tifrunner.gnm1.ann1.B0P6V2 Arachis hypogaea HOM05D006104 ORTHO05D008303 5.6e-136 488.0 296 81.1
TAR371G0041 Trochodendron aralioides HOM05D006104 ORTHO05D008303 5.6e-136 488.0 302 78.8
ECA232G1605 Erigeron canadensis HOM05D006104 ORTHO05D008303 3.6e-135 485.3 296 79.7
HanXRQChr15g0486461 Helianthus annuus HOM05D006104 ORTHO05D008303 3.6e-135 485.3 296 78.7
Cfa008019 Carpinus fangiana HOM05D006104 ORTHO05D008303 4.7e-135 485.0 315 77.5
Lsat_1_v5_gn_8_114940 Lactuca sativa HOM05D006104 ORTHO05D008303 1.8e-134 483.0 293 78.8
Cpa.g.sc108.21 Carica papaya HOM05D006104 ORTHO05D008303 4.0e-134 481.9 296 78.4
Haze_14041 Corylus avellana HOM05D006104 ORTHO05D008303 4.0e-134 481.9 315 76.8
Hund22221 Selenicereus undatus HOM05D006104 ORTHO05D008303 4.0e-134 481.9 295 78.3
Lj6g0001971 Lotus japonicus HOM05D006104 ORTHO05D008303 6.8e-134 481.1 313 77.0
QL02p055508 Quercus lobata HOM05D006104 ORTHO05D008303 6.8e-134 481.1 295 78.6
Eucgr.J01650 Eucalyptus grandis HOM05D006104 ORTHO05D008303 8.9e-134 480.7 298 78.5
Glyma.18G047900 Glycine max HOM05D006104 ORTHO05D008303 1.5e-133 479.9 296 80.1
Atru.chr1.2189 Acer truncatum HOM05D006104 ORTHO05D008303 2.0e-133 479.6 296 79.1
CANSAT78G2105 Cannabis sativa HOM05D006104 ORTHO05D008303 2.6e-133 479.2 295 78.6
AUR62037537 Chenopodium quinoa HOM05D006104 ORTHO05D008303 2.6e-133 479.2 298 77.5
Potri.012G145300 Populus trichocarpa HOM05D006104 ORTHO05D008303 7.5e-133 477.6 295 79.7
Thecc.04G056600 Theobroma cacao HOM05D006104 ORTHO05D008303 7.5e-133 477.6 315 74.6
Glyma.11G202900 Glycine max HOM05D006104 ORTHO05D008303 1.3e-132 476.9 329 72.6
PSO063G5766 Papaver somniferum HOM05D006104 ORTHO05D008303 1.3e-132 476.9 300 78.7
AUR62035547 Chenopodium quinoa HOM05D006104 ORTHO05D008303 2.9e-132 475.7 304 76.3
Cc07_g12610 Coffea canephora HOM05D006104 ORTHO05D008303 8.3e-132 474.2 279 81.4
ClCG01G008400 Citrullus lanatus HOM05D006104 ORTHO05D008303 1.1e-131 473.8 318 73.3
Ciclev10011871m.g Citrus clementina HOM05D006104 ORTHO05D008303 1.1e-131 473.8 311 76.2
RcHm_v2.0_Chr7g0242021 Rosa chinensis HOM05D006104 ORTHO05D008303 2.4e-131 472.6 303 76.6
Gorai.008G055000 Gossypium raimondii HOM05D006104 ORTHO05D008303 3.2e-131 472.2 290 77.9
BNapus_Darmor_BZH_scaffold_122p00170 Brassica napus HOM05D006104 ORTHO05D008303 4.1e-131 471.9 299 77.3
FvH4_5g39720 Fragaria vesca HOM05D006104 ORTHO05D008303 4.1e-131 471.9 299 76.3
Ah.06g191390 Amaranthus hybridus HOM05D006104 ORTHO05D008303 5.4e-131 471.5 320 73.1
BraA01t04624Z Brassica rapa HOM05D006104 ORTHO05D008303 5.4e-131 471.5 299 77.3
CARHR076690 Cardamine hirsuta HOM05D006104 ORTHO05D008303 5.4e-131 471.5 299 76.6
Gohir.D12G051700 Gossypium hirsutum HOM05D006104 ORTHO05D008303 7.0e-131 471.1 290 77.6
MD09G1187600 Malus domestica HOM05D006104 ORTHO05D008303 7.0e-131 471.1 299 77.3
Aa31LG5G13170 Aethionema arabicum HOM05D006104 ORTHO05D008303 1.2e-130 470.3 293 77.8
CAN.G304.9 Capsicum annuum HOM05D006104 ORTHO05D008303 1.2e-130 470.3 329 72.9
Duzib138G0961 Durio zibethinus HOM05D006104 ORTHO05D008303 2.7e-130 469.2 295 78.3
FAN18G3652 Fragaria x ananassa HOM05D006104 ORTHO05D008303 3.5e-130 468.8 299 75.9
Carub.0003s0179 Capsella rubella HOM05D006104 ORTHO05D008303 4.6e-130 468.4 299 75.6
PGR042G1876 Punica granatum HOM05D006104 ORTHO05D008303 6.0e-130 468.0 312 74.4
Sp3g01720 Schrenkiella parvula HOM05D006104 ORTHO05D008303 6.0e-130 468.0 299 75.9
EL10Ac1g01448 Beta vulgaris HOM05D006104 ORTHO05D008303 7.8e-130 467.6 321 71.7
BolC1t05884H Brassica oleracea HOM05D006104 ORTHO05D008303 1.0e-129 467.2 299 76.6
Thhalv10020801m.g Eutrema salsugineum HOM05D006104 ORTHO05D008303 1.0e-129 467.2 296 76.7
THA.LOC104820927 Tarenaya hassleriana HOM05D006104 ORTHO05D008303 1.7e-129 466.5 299 76.9
TWI74G1645 Tripterygium wilfordii HOM05D006104 ORTHO05D008303 5.0e-129 464.9 290 77.9
AL3G12080 Arabidopsis lyrata HOM05D006104 ORTHO05D008303 6.6e-129 464.5 299 75.3
Ca_15100_v3 Cicer arietinum L. HOM05D006104 ORTHO05D008303 6.6e-129 464.5 324 72.5
MBI06_g37978_MAGBIO Magnolia biondii HOM05D006104 ORTHO05D008303 6.6e-129 464.5 298 75.2
Medtr3g063240 Medicago truncatula HOM05D006104 ORTHO05D008303 8.6e-129 464.2 300 75.7
AT3G02690 Arabidopsis thaliana HOM05D006104 ORTHO05D008303 1.1e-128 463.8 299 74.9
Actinidia32997 Actinidia chinensis HOM05D006104 ORTHO05D008303 1.6e-127 459.9 324 72.5
Lj4A249G56 Lonicera japonica HOM05D006104 ORTHO05D008303 1.1e-126 457.2 285 78.2
Sabra12G0109100 Salix brachista HOM05D006104 ORTHO05D008303 3.1e-126 455.7 350 68.0
GSVIVG01033198001 Vitis vinifera HOM05D006104 ORTHO05D008303 7.5e-125 451.1 280 80.0
Zm00001eb044830 Zea mays HOM05D006104 ORTHO05D008303 3.7e-124 448.7 291 75.6
Nn4g25028 Nelumbo nucifera HOM05D006104 ORTHO05D008303 4.9e-124 448.4 322 70.2
Phvul.006G083500 Phaseolus vulgaris HOM05D006104 ORTHO05D008303 7.1e-123 444.5 319 69.0
CDE04G1404 Ceratophyllum demersum HOM05D006104 ORTHO05D008303 9.2e-123 444.1 319 67.4
VMungo0540G0919 Vigna mungo HOM05D006104 ORTHO05D008303 3.5e-122 442.2 319 69.0
Aqoxy3G04351 Aquilegia oxysepala HOM05D006104 ORTHO05D008303 6.0e-122 441.4 321 70.1
Lalb_Chr18g0053941 Lupinus albus HOM05D006104 ORTHO05D008303 6.0e-122 441.4 296 73.0
HPP92_022205 Vanilla planifolia HOM05D006104 ORTHO05D008303 7.8e-122 441.0 327 66.7
Medtr3g063250 Medicago truncatula HOM05D006104 ORTHO05D008303 1.3e-121 440.3 301 73.1
ATR0124G053 Amborella trichopoda HOM05D006104 ORTHO05D008303 1.7e-121 439.9 287 74.9
FAN08G3450 Fragaria x ananassa HOM05D006104 ORTHO05D008303 1.1e-120 437.2 378 60.3
Gohir.A12G053200 Gossypium hirsutum HOM05D006104 ORTHO05D008303 1.6e-119 433.3 261 79.7
unitig_748.g7253 Utricularia gibba HOM05D006104 ORTHO05D008303 4.1e-115 418.7 267 79.4
BNapus_Darmor_BZH_scaffold_99p00200 Brassica napus HOM05D006104 ORTHO05D008303 9.2e-115 417.5 267 76.8
MELO3C025108.2 Cucumis melo HOM05D006104 ORTHO05D008303 2.1e-114 416.4 465 51.0
AagrBONN_evm.TU.Sc2ySwM_368.1984 Anthoceros agrestis HOM05D006104 ORTHO05D008303 3.5e-114 415.6 304 69.4
Sc09g0004650 Simmondsia chinensis HOM05D006104 ORTHO05D008303 1.4e-110 403.7 250 78.0
SalBow5G0256 Salvia bowleyana HOM05D006104 ORTHO05D008303 4.4e-109 398.7 327 67.9
Mapoly0068s0059 Marchantia polymorpha HOM05D006104 ORTHO05D008303 1.4e-107 393.7 333 62.8
vmacro20444 Vaccinium macrocarpon HOM05D006104 ORTHO05D008303 3.5e-106 389.0 321 65.7
EL10Ac4g08870 Beta vulgaris HOM05D006104 ORTHO05D008303 8.7e-105 384.4 242 76.4
Pp3c19_6070 Physcomitrium patens HOM05D006104 ORTHO05D008303 8.7e-105 384.4 353 55.5
SMO364G0667 Selaginella moellendorffii HOM05D006104 ORTHO05D008303 3.6e-103 379.0 294 64.6
CSS0044834 Camellia sinensis var. sinensis HOM05D006104 ORTHO05D008303 1.1e-102 377.5 292 66.8
FAN04G1807 Fragaria x ananassa HOM05D006104 ORTHO05D008303 9.0e-102 374.4 398 51.8
Hma1.2p1_0085F.1_g043890 Hydrangea macrophylla HOM05D006104 ORTHO05D008303 1.8e-97 360.1 245 72.7
CBR_g22386 Chara braunii HOM05D006104 ORTHO05D008303 8.1e-95 351.3 336 55.7
MCO16G393 Micromonas commoda HOM05D006104 ORTHO05D008303 3.4e-93 345.9 318 56.9
CsaV3_5G024350 Cucumis sativus L. HOM05D006104 ORTHO05D008303 3.8e-84 315.8 211 72.5
Pp3c7_24690 Physcomitrium patens HOM05D006104 ORTHO05D008303 1.6e-82 310.5 305 51.5
Manes.01G125800 Manihot esculenta HOM05D006104 ORTHO05D008303 8.7e-81 304.7 183 79.8
COL.COLO4_13439 Corchorus olitorius HOM05D006104 ORTHO05D008303 5.7e-80 302.0 183 78.7
Cre12.g507950 Chlamydomonas reinhardtii HOM05D006104 ORTHO05D008303 1.6e-79 300.4 327 51.1
Sed0008277 Sechium edule HOM05D006104 ORTHO05D008303 4.8e-79 298.9 205 72.7
Prupe.8G267800 Prunus persica HOM05D006104 ORTHO05D008303 1.4e-78 297.4 183 77.0
PRCOL_00000403 Prasinoderma coloniale HOM05D006104 ORTHO05D008303 2.4e-78 296.6 293 54.9
TPR.G37386 Trifolium pratense HOM05D006104 ORTHO05D008303 5.0e-76 288.9 203 70.4
SEGI_11411 Sequoiadendron giganteum HOM05D006104 ORTHO05D008303 1.3e-71 274.2 194 69.1
QL02p056562 Quercus lobata HOM05D006104 ORTHO05D008303 1.0e-68 264.6 161 77.0
Os10g0493900 Oryza sativa ssp. japonica HOM05D006104 ORTHO05D008303 1.7e-68 263.8 158 78.5
SEGI_16808 Sequoiadendron giganteum HOM05D006104 ORTHO05D008303 5.3e-62 242.3 149 75.2
TPR.G14061 Trifolium pratense HOM05D006104 ORTHO05D008303 4.8e-55 219.2 134 81.3
arahy.Tifrunner.gnm1.ann1.4P08NV Arachis hypogaea HOM05D006104 ORTHO05D008303 1.6e-50 204.1 147 70.7
Psat5g144680 Pisum sativum HOM05D006104 ORTHO05D008303 4.8e-39 166.0 126 69.0
arahy.Tifrunner.gnm1.ann1.2Q0DPQ Arachis hypogaea HOM05D006104 ORTHO05D008303 1.1e-30 138.3 110 64.5
arahy.Tifrunner.gnm1.ann1.LG1UYC Arachis hypogaea HOM05D006104 ORTHO05D008303 2.0e-29 134.0 110 62.7
BraA02t04668Z Brassica rapa HOM05D006104 ORTHO05D008303 7.8e-29 132.1 142 53.5
Psat5g144720 Pisum sativum HOM05D006104 ORTHO05D008303 4.7e-26 122.9 110 58.2
Psat0s2701g0160 Pisum sativum HOM05D006104 ORTHO05D000113 3.4e-24 116.7 89 66.3
arahy.Tifrunner.gnm1.ann1.12AD17 Arachis hypogaea HOM05D000052 ORTHO05D000046 4.9e-23 112.8 61 86.9
Cpa.g.c43318 Carica papaya HOM05D006104 ORTHO05D117575 8.0e-18 95.5 256 29.7
Psat7g173760 Pisum sativum HOM05D006104 ORTHO05D008303 4.0e-17 93.2 85 61.2
Psat5g203840 Pisum sativum HOM05D006104 ORTHO05D324349 7.0e-14 82.4 155 43.2
Psat4g208480 Pisum sativum HOM05D006104 ORTHO05D008303 2.1e-10 70.9 35 85.7
Psat4g208520 Pisum sativum HOM05D006104 ORTHO05D008303 1.8e-09 67.8 77 55.8


User provided reference genes

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