Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu058758.2 Olea europaea HOM05D004631 ORTHO05D005223 1.2e-89 333.2 170 100.0
Oeu050430.2 Olea europaea HOM05D004631 ORTHO05D005223 4.7e-70 268.1 165 83.6
Cc07_g00410 Coffea canephora HOM05D004631 ORTHO05D005223 3.8e-64 248.4 169 73.4
QL02p072911 Quercus lobata HOM05D004631 ORTHO05D005223 1.2e-60 236.9 168 68.5
RhsimUnG0241300 Rhododendron simsii HOM05D004631 ORTHO05D005223 1.2e-60 236.9 164 72.6
Gohir.D10G085100 Gossypium hirsutum HOM05D004631 ORTHO05D005223 1.5e-60 236.5 169 68.6
Sopen02g038460 Solanum pennellii HOM05D004631 ORTHO05D005223 1.5e-60 236.5 169 69.8
Dinv33383 Davidia involucrata HOM05D004631 ORTHO05D005223 2.0e-60 236.1 165 72.1
Lj7A605T75 Lonicera japonica HOM05D004631 ORTHO05D005223 4.4e-60 235.0 167 70.1
CAN.G473.59 Capsicum annuum HOM05D004631 ORTHO05D005223 5.7e-60 234.6 169 68.6
Gohir.A10G160500 Gossypium hirsutum HOM05D004631 ORTHO05D005223 9.8e-60 233.8 169 68.0
Rhsim08G0046200 Rhododendron simsii HOM05D004631 ORTHO05D005223 1.3e-59 233.4 164 72.0
GSVIVG01001850001 Vitis vinifera HOM05D004631 ORTHO05D005223 1.3e-59 233.4 165 70.3
CANSAT64G0886 Cannabis sativa HOM05D004631 ORTHO05D005223 1.7e-59 233.0 170 70.0
HanXRQChr17g0549531 Helianthus annuus HOM05D004631 ORTHO05D005223 1.7e-59 233.0 167 68.3
RcHm_v2.0_Chr2g0174181 Rosa chinensis HOM05D004631 ORTHO05D005223 1.7e-59 233.0 167 70.7
Hma1.2p1_0227F.1_g095910 Hydrangea macrophylla HOM05D004631 ORTHO05D005223 2.2e-59 232.6 170 69.4
Solyc02g093820.4 Solanum lycopersicum HOM05D004631 ORTHO05D005223 2.2e-59 232.6 169 68.6
Gorai.011G093000 Gossypium raimondii HOM05D004631 ORTHO05D005223 2.8e-59 232.3 170 68.2
CSS0019474 Camellia sinensis var. sinensis HOM05D004631 ORTHO05D005223 6.3e-59 231.1 163 72.4
Duzib147G1024 Durio zibethinus HOM05D004631 ORTHO05D005223 8.3e-59 230.7 169 68.6
SGA_v2.0_scaffold18G08240 Striga asiatica HOM05D004631 ORTHO05D005223 1.1e-58 230.3 167 70.1
Cfa007277 Carpinus fangiana HOM05D004631 ORTHO05D005223 1.4e-58 229.9 167 67.7
CsaV3_6G001200 Cucumis sativus L. HOM05D004631 ORTHO05D005223 1.8e-58 229.6 168 69.0
Migut.H00060 Erythranthe guttata HOM05D004631 ORTHO05D005223 4.1e-58 228.4 165 69.1
Prupe.3G299600 Prunus persica HOM05D004631 ORTHO05D005223 4.1e-58 228.4 169 67.5
PGSC0003DMG400020270 Solanum tuberosum HOM05D004631 ORTHO05D005223 4.1e-58 228.4 169 68.6
Haze_14815 Corylus avellana HOM05D004631 ORTHO05D005223 5.4e-58 228.0 160 70.6
Thecc.04G027600 Theobroma cacao HOM05D004631 ORTHO05D005223 7.0e-58 227.6 169 67.5
Actinidia05943 Actinidia chinensis HOM05D000918 ORTHO05D000791 9.2e-58 227.3 167 69.5
Hma1.2p1_0279F.1_g112270 Hydrangea macrophylla HOM05D004631 ORTHO05D005223 9.2e-58 227.3 167 68.3
vmacro18314 Vaccinium macrocarpon HOM05D004631 ORTHO05D005223 9.2e-58 227.3 159 71.1
MSTRG.24067 Avicennia marina HOM05D004631 ORTHO05D005223 2.0e-57 226.1 167 68.3
CSS0019664 Camellia sinensis var. sinensis HOM05D004631 ORTHO05D005223 2.7e-57 225.7 168 69.0
CiPaw.03G050500 Carya illinoinensis HOM05D004631 ORTHO05D005223 2.7e-57 225.7 168 69.0
Atru.chr6.2487 Acer truncatum HOM05D004631 ORTHO05D005223 5.9e-57 224.6 167 67.7
Gorai.012G089800 Gossypium raimondii HOM05D004631 ORTHO05D005223 5.9e-57 224.6 169 66.3
TWI59G0755 Tripterygium wilfordii HOM05D004631 ORTHO05D005223 7.7e-57 224.2 167 63.5
DCAR_021756 Daucus carota HOM05D004631 ORTHO05D005223 1.0e-56 223.8 166 69.3
Gohir.D04G079800 Gossypium hirsutum HOM05D004631 ORTHO05D005223 1.3e-56 223.4 169 65.7
Ah.11g049900 Amaranthus hybridus HOM05D000470 ORTHO05D000348 1.7e-56 223.0 169 66.3
TAR629G3282 Trochodendron aralioides HOM05D004631 ORTHO05D005223 2.3e-56 222.6 169 65.7
CSS0005098 Camellia sinensis var. sinensis HOM05D004631 ORTHO05D005223 2.9e-56 222.2 168 69.6
FvH4_6g52650 Fragaria vesca HOM05D004631 ORTHO05D005223 2.9e-56 222.2 167 67.7
Cpa.g.c34704 Carica papaya HOM05D004631 ORTHO05D005223 3.8e-56 221.9 159 69.2
FAN05G1873 Fragaria x ananassa HOM05D004631 ORTHO05D005223 3.8e-56 221.9 168 68.5
MD17G1018100 Malus domestica HOM05D004631 ORTHO05D005223 3.8e-56 221.9 169 67.5
AUR62032242 Chenopodium quinoa HOM05D004631 ORTHO05D005223 5.0e-56 221.5 172 66.3
Duzib264G0826 Durio zibethinus HOM05D004631 ORTHO05D005223 6.6e-56 221.1 169 65.1
FAN02G2863 Fragaria x ananassa HOM05D004631 ORTHO05D005223 6.6e-56 221.1 167 67.7
CiPaw.04G033100 Carya illinoinensis HOM05D004631 ORTHO05D005223 8.6e-56 220.7 164 67.1
COL.COLO4_29276 Corchorus olitorius HOM05D004631 ORTHO05D005223 8.6e-56 220.7 164 67.7
Lsat_1_v5_gn_0_32720 Lactuca sativa HOM05D004631 ORTHO05D005223 8.6e-56 220.7 167 65.9
Sed0025843 Sechium edule HOM05D004631 ORTHO05D005223 8.6e-56 220.7 168 67.3
MD09G1017300 Malus domestica HOM05D004631 ORTHO05D005223 1.1e-55 220.3 170 65.9
vmacro05924 Vaccinium macrocarpon HOM05D004631 ORTHO05D005223 1.1e-55 220.3 164 68.3
Gohir.A05G341700 Gossypium hirsutum HOM05D004631 ORTHO05D005223 2.5e-55 219.2 165 66.1
TWI23G0469 Tripterygium wilfordii HOM05D004631 ORTHO05D005223 2.5e-55 219.2 167 62.9
MSTRG.3110 Avicennia marina HOM05D004631 ORTHO05D005223 3.3e-55 218.8 168 68.5
FAN14G1903 Fragaria x ananassa HOM05D004631 ORTHO05D005223 4.3e-55 218.4 168 67.3
Nn4g22438 Nelumbo nucifera HOM05D004631 ORTHO05D005223 4.3e-55 218.4 171 66.1
Glyma.19G082400 Glycine max HOM05D004631 ORTHO05D005223 5.6e-55 218.0 168 65.5
Glyma.16G063100 Glycine max HOM05D004631 ORTHO05D005223 1.2e-54 216.9 169 64.5
Lsat_1_v5_gn_4_185741 Lactuca sativa HOM05D004631 ORTHO05D005223 1.2e-54 216.9 161 69.6
Sed0000329 Sechium edule HOM05D004631 ORTHO05D005223 1.2e-54 216.9 168 66.1
AL5G16540 Arabidopsis lyrata HOM05D004631 ORTHO05D005223 1.6e-54 216.5 168 68.5
CARHR148590 Cardamine hirsuta HOM05D004631 ORTHO05D005223 1.6e-54 216.5 170 66.5
AUR62011927 Chenopodium quinoa HOM05D004631 ORTHO05D005223 1.6e-54 216.5 172 65.7
Potri.001G264500 Populus trichocarpa HOM05D004631 ORTHO05D005223 2.8e-54 215.7 164 65.2
PGR142G2057 Punica granatum HOM05D004631 ORTHO05D005223 2.8e-54 215.7 163 68.7
Thhalv10004822m.g Eutrema salsugineum HOM05D004631 ORTHO05D005223 4.7e-54 214.9 170 65.9
MBI05_g32279_MAGBIO Magnolia biondii HOM05D004631 ORTHO05D005223 4.7e-54 214.9 165 67.9
Potri.009G059300 Populus trichocarpa HOM05D004631 ORTHO05D005223 4.7e-54 214.9 167 62.9
Manes.07G089400 Manihot esculenta HOM05D004631 ORTHO05D005223 6.1e-54 214.5 167 62.9
Manes.15G156400 Manihot esculenta HOM05D004631 ORTHO05D005223 6.1e-54 214.5 167 62.9
FAN09G3073 Fragaria x ananassa HOM05D004631 ORTHO05D005223 8.0e-54 214.2 168 65.5
Eucgr.I01692 Eucalyptus grandis HOM05D004631 ORTHO05D005223 1.8e-53 213.0 162 66.0
Sabra09G0043700 Salix brachista HOM05D004631 ORTHO05D005223 1.8e-53 213.0 167 63.5
Sp2g16470 Schrenkiella parvula HOM05D004631 ORTHO05D005223 1.8e-53 213.0 170 65.3
AT3G27310 Arabidopsis thaliana HOM05D004631 ORTHO05D005223 2.3e-53 212.6 164 67.7
ClCG11G006850 Citrullus lanatus HOM05D004631 ORTHO05D005223 2.3e-53 212.6 192 59.4
TAR371G0552 Trochodendron aralioides HOM05D004631 ORTHO05D005223 6.8e-53 211.1 167 63.5
ECA246G0472 Erigeron canadensis HOM05D004631 ORTHO05D005223 1.2e-52 210.3 176 63.1
unitig_62.g23368 Utricularia gibba HOM05D004631 ORTHO05D005223 1.2e-52 210.3 156 67.9
EL10Ac5g10455 Beta vulgaris HOM05D004631 ORTHO05D005223 1.5e-52 209.9 170 63.5
Sabra16G0162600 Salix brachista HOM05D004631 ORTHO05D005223 2.0e-52 209.5 167 63.5
HanXRQChr15g0487081 Helianthus annuus HOM05D004631 ORTHO05D005223 2.6e-52 209.1 168 66.1
Dinv25693 Davidia involucrata HOM05D004631 ORTHO05D005223 5.7e-52 208.0 138 74.6
PSO782G2324 Papaver somniferum HOM05D004631 ORTHO05D005223 5.7e-52 208.0 168 63.1
arahy.Tifrunner.gnm1.ann1.5W0L45 Arachis hypogaea HOM05D004631 ORTHO05D005223 9.8e-52 207.2 162 65.4
Carub.0005s0558 Capsella rubella HOM05D004631 ORTHO05D005223 2.2e-51 206.1 168 65.5
Lalb_Chr14g0363051 Lupinus albus HOM05D004631 ORTHO05D005223 2.2e-51 206.1 170 61.8
arahy.Tifrunner.gnm1.ann1.NS464T Arachis hypogaea HOM05D004631 ORTHO05D005223 2.9e-51 205.7 162 65.4
ECA232G0338 Erigeron canadensis HOM05D004631 ORTHO05D005223 3.7e-51 205.3 167 63.5
BcaC06g31006 Brassica carinata HOM05D004631 ORTHO05D005223 4.9e-51 204.9 168 63.7
Aqoxy5G03556 Aquilegia oxysepala HOM05D004631 ORTHO05D005223 6.4e-51 204.5 167 60.5
Psat1g084240 Pisum sativum HOM05D004631 ORTHO05D005223 8.3e-51 204.1 150 69.3
Ciclev10016175m.g Citrus clementina HOM05D004631 ORTHO05D005223 1.1e-50 203.8 200 54.5
Peaxi162Scf00420g00342 Petunia axillaris HOM05D004631 ORTHO05D005223 1.4e-50 203.4 167 62.9
Peaxi162Scf00420g00345 Petunia axillaris HOM05D004631 ORTHO05D005223 1.4e-50 203.4 167 62.9
VMungo1383G3654 Vigna mungo HOM05D004631 ORTHO05D005223 1.4e-50 203.4 163 62.0
PSO063G4908 Papaver somniferum HOM05D004631 ORTHO05D005223 1.8e-50 203.0 168 60.7
Lj2g0014181 Lotus japonicus HOM05D004631 ORTHO05D005223 3.2e-50 202.2 154 65.6
SalBow1G3920 Salvia bowleyana HOM05D004631 ORTHO05D005223 9.2e-50 200.7 198 55.1
TPR.G29003 Trifolium pratense HOM05D004631 ORTHO05D005223 1.6e-49 199.9 154 64.9
Ca_04405_v3 Cicer arietinum L. HOM05D004631 ORTHO05D005223 2.0e-49 199.5 154 65.6
SalBow1G0328 Salvia bowleyana HOM05D004631 ORTHO05D005223 2.0e-49 199.5 198 54.5
BcaC06g33833 Brassica carinata HOM05D004631 ORTHO05D005223 4.6e-49 198.4 165 63.6
BolC7t44152H Brassica oleracea HOM05D004631 ORTHO05D005223 4.6e-49 198.4 165 63.6
C07p36360 Brassica napus HOM05D004631 ORTHO05D005223 5.9e-49 198.0 165 63.0
Aa31LG2G5340 Aethionema arabicum HOM05D004631 ORTHO05D005223 1.3e-48 196.8 170 62.9
DCAR_011290 Daucus carota HOM05D004631 ORTHO05D005223 1.3e-48 196.8 169 62.1
Phvul.008G148800 Phaseolus vulgaris HOM05D004631 ORTHO05D005223 2.3e-48 196.1 166 60.8
A06p41300 Brassica napus HOM05D004631 ORTHO05D005223 5.0e-48 194.9 157 63.7
BraA06t27055Z Brassica rapa HOM05D004631 ORTHO05D005223 5.0e-48 194.9 157 63.7
Sc03g0007030 Simmondsia chinensis HOM05D004631 ORTHO05D005223 3.6e-46 188.7 123 77.2
Nitab4.5_0001863g0070 Nicotiana tabacum HOM05D004631 ORTHO05D005223 6.2e-46 188.0 163 61.3
HPP92_028037 Vanilla planifolia HOM05D004631 ORTHO05D005223 1.8e-45 186.4 167 58.7
Medtr6g023080 Medicago truncatula HOM05D004631 ORTHO05D005223 3.1e-45 185.7 142 64.8
ATR0824G076 Amborella trichopoda HOM05D004631 ORTHO05D005223 3.4e-44 182.2 165 57.0
Medtr6g022770 Medicago truncatula HOM05D004631 ORTHO05D005223 3.7e-43 178.7 159 57.9
Lj1g0026695 Lotus japonicus HOM05D004631 ORTHO05D005223 7.8e-41 171.0 170 54.7
MD10G1138200 Malus domestica HOM05D004631 ORTHO05D005223 3.9e-40 168.7 126 69.0
Os04g0485200 Oryza sativa ssp. japonica HOM05D004631 ORTHO05D005223 3.9e-40 168.7 161 54.7
MELO3C008218.2 Cucumis melo HOM05D004631 ORTHO05D005223 6.6e-40 167.9 122 69.7
Prupe.8G176800 Prunus persica HOM05D004631 ORTHO05D005223 1.1e-39 167.2 127 66.9
TPR.G2332 Trifolium pratense HOM05D004631 ORTHO05D005223 5.6e-39 164.9 132 62.9
Zm00001eb425170 Zea mays HOM05D004631 ORTHO05D005223 9.5e-39 164.1 171 53.2
Zm00001eb079230 Zea mays HOM05D004631 ORTHO05D005223 2.8e-38 162.5 168 54.2
Ciclev10003548m.g Citrus clementina HOM05D004631 ORTHO05D005223 8.9e-37 157.5 180 54.4
Mapoly0078s0021 Marchantia polymorpha HOM05D004631 ORTHO05D005223 1.1e-34 150.6 167 50.3
Actinidia35792 Actinidia chinensis HOM05D004631 ORTHO05D005223 4.1e-34 148.7 115 71.3
Medtr0531s0010 Medicago truncatula HOM05D004631 ORTHO05D005223 1.6e-33 146.7 103 68.9
Nitab4.5_0008718g0050 Nicotiana tabacum HOM05D004631 ORTHO05D005223 7.8e-33 144.4 176 54.5
Pp3c7_140 Physcomitrium patens HOM05D004631 ORTHO05D005223 4.9e-27 125.2 126 48.4
Eucgr.L03061 Eucalyptus grandis HOM05D004631 ORTHO05D005223 1.1e-26 124.0 74 78.4
SMO199G0125 Selaginella moellendorffii HOM05D004631 ORTHO05D005223 6.0e-25 118.2 122 47.5
FAN27G0193 Fragaria x ananassa HOM05D004631 ORTHO05D005223 1.1e-23 114.0 132 53.0
FAN24G1590 Fragaria x ananassa HOM05D004631 ORTHO05D005223 1.9e-23 113.2 132 53.0
FvH4_2g09210 Fragaria vesca HOM05D004631 ORTHO05D005223 4.3e-23 112.1 131 52.7
BcaC04g23906 Brassica carinata HOM05D004631 ORTHO05D005223 8.9e-21 104.4 91 63.7
Medtr4g103350 Medicago truncatula HOM05D004631 ORTHO05D005223 4.4e-20 102.1 129 46.5
Potri.001G337533 Populus trichocarpa HOM05D004631 ORTHO05D005223 1.7e-19 100.1 109 52.3
A09p03370 Brassica napus HOM05D004631 ORTHO05D005223 1.8e-13 80.1 54 64.8
BraA09t35975Z Brassica rapa HOM05D004631 ORTHO05D005223 1.8e-13 80.1 54 64.8
BraA09t35976Z Brassica rapa HOM05D004631 ORTHO05D005223 1.8e-13 80.1 54 64.8
RcHm_v2.0_Chr6g0265061 Rosa chinensis HOM05D004631 ORTHO05D005223 2.4e-13 79.7 108 50.9
HPP92_027613 Vanilla planifolia HOM05D004631 ORTHO05D005223 9.0e-13 77.8 46 71.7
Actinidia36166 Actinidia chinensis HOM05D004631 ORTHO05D005223 3.8e-11 72.4 59 64.4
Sabra16G0218300 Salix brachista HOM05D004631 ORTHO05D005223 2.1e-09 66.6 47 68.1
Zm00001eb055680 Zea mays HOM05D004631 ORTHO05D005223 6.7e-08 61.6 37 67.6
SMO361G0508 Selaginella moellendorffii HOM05D022709 ORTHO05D005223 1.1e-07 60.8 120 34.2
SMO361G0265 Selaginella moellendorffii HOM05D022709 ORTHO05D005223 3.3e-07 59.3 129 31.8
C09p03590 Brassica napus HOM05D004631 ORTHO05D005223 5.6e-07 58.5 36 75.0
HPP92_027614 Vanilla planifolia HOM05D004631 ORTHO05D005223 5.6e-07 58.5 73 49.3


User provided reference genes

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