Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu058749.1 Olea europaea HOM05D007183 ORTHO05D008829 6.3e-45 183.7 92 100.0
Oeu038241.1 Olea europaea HOM05D007183 ORTHO05D008829 1.6e-32 142.5 75 92.0
Manes.13G149600 Manihot esculenta HOM05D007183 ORTHO05D008829 8.0e-16 87.0 61 63.9
Aqoxy1G02644 Aquilegia oxysepala HOM05D007183 ORTHO05D008829 3.0e-15 85.1 85 48.2
Gohir.A05G163250 Gossypium hirsutum HOM05D007183 ORTHO05D008829 4.0e-15 84.7 61 63.9
Gorai.009G171300 Gossypium raimondii HOM05D007183 ORTHO05D008829 4.0e-15 84.7 61 63.9
Dinv40521 Davidia involucrata HOM05D007183 ORTHO05D008829 5.2e-15 84.3 61 63.9
Duzib235G0436 Durio zibethinus HOM05D007183 ORTHO05D008829 5.2e-15 84.3 61 63.9
Gohir.D05G166200 Gossypium hirsutum HOM05D007183 ORTHO05D008829 5.2e-15 84.3 61 62.3
TWI63G1715 Tripterygium wilfordii HOM05D007183 ORTHO05D008829 6.8e-15 84.0 61 60.7
Manes.16G023400 Manihot esculenta HOM05D007183 ORTHO05D008829 1.2e-14 83.2 61 59.0
Prupe.4G040300 Prunus persica HOM05D007183 ORTHO05D008829 1.2e-14 83.2 84 48.8
Thecc.06G194600 Theobroma cacao HOM05D007183 ORTHO05D008829 1.2e-14 83.2 61 62.3
TWI38G0385 Tripterygium wilfordii HOM05D007183 ORTHO05D008829 1.5e-14 82.8 61 60.7
Sopen02g023560 Solanum pennellii HOM05D007183 ORTHO05D008829 2.6e-14 82.0 81 53.1
MD10G1300400 Malus domestica HOM05D007183 ORTHO05D008829 3.4e-14 81.6 79 49.4
COL.COLO4_31536 Corchorus olitorius HOM05D007183 ORTHO05D008829 4.4e-14 81.3 63 63.5
Glyma.15G069800 Glycine max HOM05D007183 ORTHO05D008829 4.4e-14 81.3 61 60.7
Thecc.02G174600 Theobroma cacao HOM05D007183 ORTHO05D008829 4.4e-14 81.3 61 59.0
Dinv03840 Davidia involucrata HOM05D007183 ORTHO05D008829 7.5e-14 80.5 57 64.9
Glyma.13G243900 Glycine max HOM05D007183 ORTHO05D008829 7.5e-14 80.5 57 64.9
Lj2P283T62 Lonicera japonica HOM05D007183 ORTHO05D008829 9.8e-14 80.1 83 49.4
Ciclev10017704m.g Citrus clementina HOM05D007183 ORTHO05D008829 1.7e-13 79.3 61 55.7
Hma1.2p1_0191F.1_g083390 Hydrangea macrophylla HOM05D007183 ORTHO05D008829 1.7e-13 79.3 88 46.6
MD05G1322500 Malus domestica HOM05D007183 ORTHO05D008829 1.7e-13 79.3 59 59.3
PGSC0003DMG400045796 Solanum tuberosum HOM05D007183 ORTHO05D008829 1.7e-13 79.3 80 52.5
Cc05_g06690 Coffea canephora HOM05D007183 ORTHO05D008829 2.2e-13 79.0 57 63.2
Gohir.A10G022800 Gossypium hirsutum HOM05D007183 ORTHO05D008829 2.8e-13 78.6 74 51.4
Nitab4.5_0001820g0090 Nicotiana tabacum HOM05D007183 ORTHO05D008829 2.8e-13 78.6 81 51.9
Nitab4.5_0002370g0040 Nicotiana tabacum HOM05D007183 ORTHO05D008829 3.7e-13 78.2 61 59.0
Solyc02g078710.1 Solanum lycopersicum HOM05D007183 ORTHO05D008829 3.7e-13 78.2 81 51.9
TAR629G0430 Trochodendron aralioides HOM05D007183 ORTHO05D008829 8.3e-13 77.0 61 55.7
COL.COLO4_35412 Corchorus olitorius HOM05D007183 ORTHO05D008829 1.1e-12 76.6 57 63.2
Gohir.D10G023600 Gossypium hirsutum HOM05D007183 ORTHO05D008829 1.1e-12 76.6 74 50.0
Gorai.011G024700 Gossypium raimondii HOM05D007183 ORTHO05D008829 1.1e-12 76.6 74 50.0
Nitab4.5_0001871g0020 Nicotiana tabacum HOM05D007183 ORTHO05D008829 1.1e-12 76.6 61 57.4
Psat1g207000 Pisum sativum HOM05D007183 ORTHO05D008829 1.1e-12 76.6 84 50.0
VMungo0540G0277 Vigna mungo HOM05D007183 ORTHO05D008829 1.1e-12 76.6 57 61.4
Ca_00299_v3 Cicer arietinum L. HOM05D007183 ORTHO05D008829 3.1e-12 75.1 84 48.8
Lj6g0020427 Lotus japonicus HOM05D007183 ORTHO05D008829 3.1e-12 75.1 80 50.0
Phvul.006G189500 Phaseolus vulgaris HOM05D007183 ORTHO05D008829 3.1e-12 75.1 57 57.9
Potri.011G046100 Populus trichocarpa HOM05D007183 ORTHO05D008829 4.1e-12 74.7 61 52.5
Cpa.g.sc34.121 Carica papaya HOM05D007183 ORTHO05D008829 5.4e-12 74.3 88 44.3
Medtr2g012790 Medicago truncatula HOM05D007183 ORTHO05D008829 7.0e-12 73.9 64 57.8
TPR.G36730 Trifolium pratense HOM05D007183 ORTHO05D008829 7.0e-12 73.9 64 57.8
Actinidia09880 Actinidia chinensis HOM05D007183 ORTHO05D008829 9.2e-12 73.6 57 61.4
Migut.H01046 Erythranthe guttata HOM05D007183 ORTHO05D008829 9.2e-12 73.6 72 50.0
FvH4_3g27971 Fragaria vesca HOM05D007183 ORTHO05D008829 9.2e-12 73.6 58 60.3
Potri.004G037400 Populus trichocarpa HOM05D007183 ORTHO05D008829 1.2e-11 73.2 61 52.5
ATR0693G416 Amborella trichopoda HOM05D007183 ORTHO05D008829 1.6e-11 72.8 79 46.8
Gohir.D02G181900 Gossypium hirsutum HOM05D007183 ORTHO05D008829 1.6e-11 72.8 84 47.6
Gorai.005G204400 Gossypium raimondii HOM05D007183 ORTHO05D008829 1.6e-11 72.8 84 47.6
Haze_06540 Corylus avellana HOM05D007183 ORTHO05D008829 2.0e-11 72.4 61 55.7
CAN.G996.14 Capsicum annuum HOM05D007183 ORTHO05D008829 2.7e-11 72.0 57 57.9
CiPaw.09G053400 Carya illinoinensis HOM05D007183 ORTHO05D008829 2.7e-11 72.0 58 58.6
HanXRQChr16g0517841 Helianthus annuus HOM05D007183 ORTHO05D008829 3.5e-11 71.6 63 52.4
Nitab4.5_0007319g0020 Nicotiana tabacum HOM05D007183 ORTHO05D008829 3.5e-11 71.6 81 48.1
PGR042G2243 Punica granatum HOM05D007183 ORTHO05D008829 3.5e-11 71.6 63 55.6
Eucgr.D00687 Eucalyptus grandis HOM05D007183 ORTHO05D008829 7.8e-11 70.5 58 53.4
RcHm_v2.0_Chr5g0007471 Rosa chinensis HOM05D007183 ORTHO05D008829 7.8e-11 70.5 58 56.9
Peaxi162Scf00007g00283 Petunia axillaris HOM05D007183 ORTHO05D008829 1.0e-10 70.1 61 52.5
Actinidia01436 Actinidia chinensis HOM05D007183 ORTHO05D008829 1.3e-10 69.7 88 44.3
MBI02_g37921_MAGBIO Magnolia biondii HOM05D007183 ORTHO05D008829 1.3e-10 69.7 60 51.7
Solyc07g054570.1 Solanum lycopersicum HOM05D007183 ORTHO05D008829 1.3e-10 69.7 62 53.2
DCAR_021231 Daucus carota HOM05D007183 ORTHO05D008829 2.3e-10 68.9 57 52.6
GSVIVG01030561001 Vitis vinifera HOM05D007183 ORTHO05D008829 2.9e-10 68.6 61 49.2
ClCG02G001190 Citrullus lanatus HOM05D007183 ORTHO05D008829 3.8e-10 68.2 74 43.2
Migut.M01164 Erythranthe guttata HOM05D007183 ORTHO05D008829 3.8e-10 68.2 80 47.5
CsaV3_7G004260 Cucumis sativus L. HOM05D007183 ORTHO05D008829 6.6e-10 67.4 74 44.6
Peaxi162Scf00608g00919 Petunia axillaris HOM05D007183 ORTHO05D008829 6.6e-10 67.4 61 50.8
Solyc08g068470.1 Solanum lycopersicum HOM05D007183 ORTHO05D008829 6.6e-10 67.4 62 51.6
MELO3C018752.2 Cucumis melo HOM05D007183 ORTHO05D008829 1.9e-09 65.9 74 43.2
arahy.Tifrunner.gnm1.ann1.B6W742 Arachis hypogaea HOM05D007183 ORTHO05D008829 2.5e-09 65.5 86 45.3
Sabra19G0114400 Salix brachista HOM05D007183 ORTHO05D008829 2.5e-09 65.5 65 49.2
TPR.G36795 Trifolium pratense HOM05D007183 ORTHO05D008829 2.5e-09 65.5 61 55.7
Eucgr.E03363 Eucalyptus grandis HOM05D007183 ORTHO05D008829 3.3e-09 65.1 75 44.0
Eucgr.L02005 Eucalyptus grandis HOM05D007183 ORTHO05D008829 3.3e-09 65.1 75 44.0
GSVIVG01006336001 Vitis vinifera HOM05D007183 ORTHO05D008829 9.5e-09 63.5 76 43.4
arahy.Tifrunner.gnm1.ann1.CVYZ1N Arachis hypogaea HOM05D007183 ORTHO05D008829 1.6e-08 62.8 78 38.5
arahy.Tifrunner.gnm1.ann1.R2A86L Arachis hypogaea HOM05D007183 ORTHO05D008829 1.6e-08 62.8 78 38.5
HanXRQChr05g0140521 Helianthus annuus HOM05D007183 ORTHO05D008829 1.6e-08 62.8 57 49.1
Cc00_g11490 Coffea canephora HOM05D007183 ORTHO05D008829 2.1e-08 62.4 56 53.6
CANSAT35G0251 Cannabis sativa HOM05D007183 ORTHO05D008829 2.8e-08 62.0 77 42.9
Cfa000386 Carpinus fangiana HOM05D007183 ORTHO05D008829 2.8e-08 62.0 58 51.7
PGR004G0270 Punica granatum HOM05D007183 ORTHO05D008829 2.8e-08 62.0 61 47.5
GSVIVG01006947001 Vitis vinifera HOM05D007183 ORTHO05D008829 2.8e-08 62.0 76 42.1
PGSC0003DMG400042494 Solanum tuberosum HOM05D007183 ORTHO05D008829 8.0e-08 60.5 65 49.2
Sed0021459 Sechium edule HOM05D007183 ORTHO05D008829 1.8e-07 59.3 74 37.8
Solyc10g008530.1 Solanum lycopersicum HOM05D007183 ORTHO05D008829 1.8e-07 59.3 65 47.7
arahy.Tifrunner.gnm1.ann1.EK8XNT Arachis hypogaea HOM05D007183 ORTHO05D008829 3.0e-07 58.5 80 45.0
Sed0026806 Sechium edule HOM05D007183 ORTHO05D008829 3.0e-07 58.5 74 39.2
Haze_13111 Corylus avellana HOM05D007183 ORTHO05D008829 6.8e-07 57.4 63 46.0
PSO675G2267 Papaver somniferum HOM05D007183 ORTHO05D008829 8.9e-07 57.0 57 45.6
SEGI_07341 Sequoiadendron giganteum HOM05D007183 ORTHO05D008829 5.7e-06 54.3 81 35.8


User provided reference genes

Program Settings