Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu058636.1 Olea europaea HOM05D007616 ORTHO05D008751 1.8e-100 369.4 209 100.0
Oeu000131.1 Olea europaea HOM05D007616 ORTHO05D008751 6.8e-71 271.2 212 75.9
DCAR_025356 Daucus carota HOM05D007616 ORTHO05D008751 2.4e-39 166.4 230 50.9
PGSC0003DMG400024897 Solanum tuberosum HOM05D007616 ORTHO05D008751 3.1e-39 166.0 236 49.6
Solyc01g103700.3 Solanum lycopersicum HOM05D007616 ORTHO05D008751 1.2e-38 164.1 231 49.8
Sopen01g046110 Solanum pennellii HOM05D007616 ORTHO05D008751 1.2e-38 164.1 227 50.7
MSTRG.20315 Avicennia marina HOM05D007616 ORTHO05D008751 1.7e-37 160.2 227 53.7
Nitab4.5_0002596g0080 Nicotiana tabacum HOM05D007616 ORTHO05D008751 4.9e-37 158.7 250 46.4
Nitab4.5_0000948g0040 Nicotiana tabacum HOM05D007616 ORTHO05D008751 1.1e-36 157.5 249 45.8
Peaxi162Scf00011g00934 Petunia axillaris HOM05D007616 ORTHO05D008751 1.9e-36 156.8 251 47.0
Gohir.D01G173800 Gossypium hirsutum HOM05D007616 ORTHO05D008751 2.7e-35 152.9 232 47.0
Gorai.002G215900 Gossypium raimondii HOM05D007616 ORTHO05D008751 2.7e-35 152.9 232 47.0
Cc02_g23010 Coffea canephora HOM05D007616 ORTHO05D008751 3.5e-35 152.5 235 47.2
Gohir.A01G182700 Gossypium hirsutum HOM05D007616 ORTHO05D008751 3.5e-35 152.5 232 47.4
Migut.B00786 Erythranthe guttata HOM05D007616 ORTHO05D008751 6.0e-35 151.8 248 52.8
COL.COLO4_17740 Corchorus olitorius HOM05D007616 ORTHO05D008751 2.3e-34 149.8 230 49.6
Thecc.02G023400 Theobroma cacao HOM05D007616 ORTHO05D008751 8.7e-34 147.9 232 44.8
Potri.003G009400 Populus trichocarpa HOM05D007616 ORTHO05D008751 4.3e-33 145.6 224 46.0
Potri.004G222800 Populus trichocarpa HOM05D007616 ORTHO05D008751 5.6e-33 145.2 234 47.4
Lsat_1_v5_gn_9_120740 Lactuca sativa HOM05D007616 ORTHO05D008751 2.8e-32 142.9 218 44.0
RcHm_v2.0_Chr2g0173411 Rosa chinensis HOM05D007616 ORTHO05D008751 1.4e-31 140.6 240 47.9
Duzib132G0975 Durio zibethinus HOM05D007616 ORTHO05D008751 3.1e-31 139.4 218 46.8
Manes.10G119800 Manihot esculenta HOM05D007616 ORTHO05D008751 1.5e-30 137.1 218 46.3
FvH4_6g51930 Fragaria vesca HOM05D007616 ORTHO05D008751 2.6e-30 136.3 236 41.9
Lalb_Chr18g0061041 Lupinus albus HOM05D007616 ORTHO05D008751 2.6e-30 136.3 244 44.3
Glyma.12G167600 Glycine max HOM05D007616 ORTHO05D008751 3.4e-30 136.0 222 46.8
FAN09G2205 Fragaria x ananassa HOM05D007616 ORTHO05D008751 7.6e-30 134.8 240 42.1
FAN14G2995 Fragaria x ananassa HOM05D007616 ORTHO05D008751 9.9e-30 134.4 236 41.9
Prupe.1G577200 Prunus persica HOM05D007616 ORTHO05D008751 2.2e-29 133.3 242 43.4
SGA_v2.0_scaffold272G46374 Striga asiatica HOM05D007616 ORTHO05D008751 2.2e-29 133.3 212 46.7
Manes.07G023000 Manihot esculenta HOM05D007616 ORTHO05D008751 2.9e-29 132.9 244 41.0
CiPaw.05G005800 Carya illinoinensis HOM05D007616 ORTHO05D008751 3.8e-29 132.5 224 44.6
Eucgr.I02753 Eucalyptus grandis HOM05D007616 ORTHO05D008751 4.9e-29 132.1 227 43.2
Phvul.006G218400 Phaseolus vulgaris HOM05D007616 ORTHO05D008751 4.9e-29 132.1 213 45.5
CAN.G798.53 Capsicum annuum HOM05D007616 ORTHO05D008751 8.4e-29 131.3 242 44.2
CSS0021835 Camellia sinensis var. sinensis HOM05D007616 ORTHO05D008751 1.1e-28 131.0 217 45.2
Rhsim05G0186200 Rhododendron simsii HOM05D007616 ORTHO05D008751 1.4e-28 130.6 215 47.4
Sabra01G0168700 Salix brachista HOM05D007616 ORTHO05D008751 7.1e-28 128.3 228 49.6
CSS0006253 Camellia sinensis var. sinensis HOM05D007616 ORTHO05D008751 9.3e-28 127.9 217 44.7
Sabra03G0004800 Salix brachista HOM05D007616 ORTHO05D008751 9.3e-28 127.9 223 45.3
Nn5g27765 Nelumbo nucifera HOM05D007616 ORTHO05D008751 1.2e-27 127.5 216 46.8
Psat1g223480 Pisum sativum HOM05D007616 ORTHO05D008751 3.5e-27 125.9 252 40.9
QL02p100178 Quercus lobata HOM05D007616 ORTHO05D008751 6.0e-27 125.2 253 41.1
Actinidia06472 Actinidia chinensis HOM05D007616 ORTHO05D008751 1.0e-26 124.4 193 49.2
arahy.Tifrunner.gnm1.ann1.D7HVAZ Arachis hypogaea HOM05D007616 ORTHO05D008751 1.8e-26 123.6 224 44.6
ECA236G1993 Erigeron canadensis HOM05D007616 ORTHO05D008751 1.8e-26 123.6 221 41.6
CiPaw.06G173100 Carya illinoinensis HOM05D007616 ORTHO05D008751 8.7e-26 121.3 215 46.5
MD08G1240500 Malus domestica HOM05D007616 ORTHO05D008751 8.7e-26 121.3 254 39.0
arahy.Tifrunner.gnm1.ann1.4HSG2Y Arachis hypogaea HOM05D007616 ORTHO05D008751 1.5e-25 120.6 230 43.9
HanXRQChr06g0181301 Helianthus annuus HOM05D007616 ORTHO05D008751 1.9e-25 120.2 219 40.6
VMungo0540G1916 Vigna mungo HOM05D007616 ORTHO05D008751 2.5e-25 119.8 221 43.0
Atru.chr4.2705 Acer truncatum HOM05D007616 ORTHO05D008751 3.3e-25 119.4 221 42.1
Sed0008181 Sechium edule HOM05D007616 ORTHO05D008751 7.4e-25 118.2 209 45.0
TPR.G2142 Trifolium pratense HOM05D007616 ORTHO05D008751 9.6e-25 117.9 246 40.7
Duzib248G0210 Durio zibethinus HOM05D007616 ORTHO05D008751 6.2e-24 115.2 205 43.4
Ca_00046_v3 Cicer arietinum L. HOM05D001654 ORTHO05D002773 5.3e-23 112.1 138 57.2
Lj6g0028114 Lotus japonicus HOM05D007616 ORTHO05D008751 6.9e-23 111.7 272 41.9
Medtr2g005910 Medicago truncatula HOM05D007616 ORTHO05D008751 6.9e-23 111.7 140 51.4
Aqoxy6G00124 Aquilegia oxysepala HOM05D007616 ORTHO05D008751 9.0e-23 111.3 217 41.5
CANSAT54G0672 Cannabis sativa HOM05D007616 ORTHO05D008751 9.0e-23 111.3 213 41.3
MD15G1433700 Malus domestica HOM05D007616 ORTHO05D008751 5.8e-22 108.6 260 36.5
ClCG11G013320 Citrullus lanatus HOM05D007616 ORTHO05D008751 1.7e-21 107.1 208 43.8
SalBow3G1194 Salvia bowleyana HOM05D007616 ORTHO05D008751 5.5e-20 102.1 209 44.5
TWI14G0953 Tripterygium wilfordii HOM05D007616 ORTHO05D008751 5.5e-20 102.1 222 43.2
MELO3C011824.2 Cucumis melo HOM05D007616 ORTHO05D008751 7.1e-20 101.7 119 52.9
PSO170G4229 Papaver somniferum HOM05D007616 ORTHO05D008751 2.1e-19 100.1 252 36.9
Potri.019G021000 Populus trichocarpa HOM05D007616 ORTHO05D008751 2.7e-19 99.8 218 39.0
ECA240G3878 Erigeron canadensis HOM05D007616 ORTHO05D008751 3.5e-19 99.4 225 38.7
PSO782G2099 Papaver somniferum HOM05D007616 ORTHO05D008751 1.0e-18 97.8 254 37.4
HPP92_005665 Vanilla planifolia HOM05D007616 ORTHO05D008751 1.0e-18 97.8 231 34.6
THA.LOC104816807 Tarenaya hassleriana HOM05D007616 ORTHO05D008751 1.8e-18 97.1 258 34.9
GSVIVG01023272001 Vitis vinifera HOM05D007616 ORTHO05D008751 1.5e-17 94.0 201 43.8
AL2G17970 Arabidopsis lyrata HOM05D012662 ORTHO05D008751 5.3e-15 85.5 283 33.2
Lsat_1_v5_gn_7_76421 Lactuca sativa HOM05D007616 ORTHO05D008751 5.3e-15 85.5 224 37.1
Hma1.2p1_0427F.1_g150730 Hydrangea macrophylla HOM05D007616 ORTHO05D008751 9.0e-15 84.7 119 50.4
ATR0090G002 Amborella trichopoda HOM05D007616 ORTHO05D008751 4.5e-14 82.4 128 46.9
unitig_21.g20913 Utricularia gibba HOM05D007616 ORTHO05D008751 1.7e-13 80.5 190 33.7
CsaV3_5G029830 Cucumis sativus L. HOM05D001654 ORTHO05D002773 3.8e-13 79.3 119 45.4
Sc20g0001190 Simmondsia chinensis HOM05D007616 ORTHO05D008751 3.8e-13 79.3 139 44.6
Nn1g08457 Nelumbo nucifera HOM05D007616 ORTHO05D008751 5.0e-13 79.0 225 36.0
BcaC02g10705 Brassica carinata HOM05D007616 ORTHO05D008751 2.5e-12 76.6 126 42.9
Cfa004508 Carpinus fangiana HOM05D007616 ORTHO05D008751 2.5e-12 76.6 89 51.7
Dinv07475 Davidia involucrata HOM05D001654 ORTHO05D002773 4.2e-12 75.9 102 50.0
AUR62037671 Chenopodium quinoa HOM05D002239 ORTHO05D002408 5.5e-12 75.5 213 33.8
PGR142G0501 Punica granatum HOM05D007616 ORTHO05D008751 9.3e-12 74.7 203 35.5
C01p35720 Brassica napus HOM05D007616 ORTHO05D008751 3.5e-11 72.8 119 42.9
BolC1t03530H Brassica oleracea HOM05D007616 ORTHO05D008751 3.5e-11 72.8 119 42.9
AUR62034500 Chenopodium quinoa HOM05D007616 ORTHO05D008751 3.5e-11 72.8 213 32.4
vmacro19869 Vaccinium macrocarpon HOM05D007616 ORTHO05D008751 3.9e-10 69.3 49 77.6
Haze_10065 Corylus avellana HOM05D001654 ORTHO05D002773 1.9e-09 67.0 88 46.6
Ciclev10002504m.g Citrus clementina HOM05D002661 ORTHO05D002786 2.8e-08 63.2 213 28.6
Hma1.2p1_1108F.1_g257940 Hydrangea macrophylla HOM05D007616 ORTHO05D008751 4.8e-08 62.4 222 39.2
vmacro04348 Vaccinium macrocarpon HOM05D002661 ORTHO05D002786 1.4e-07 60.8 195 30.3
PGSC0003DMG400022533 Solanum tuberosum HOM05D002661 ORTHO05D002786 1.8e-07 60.5 207 27.5
A09p18580 Brassica napus HOM05D012662 ORTHO05D008751 2.4e-07 60.1 200 29.5
Cpa.g.sc6.246 Carica papaya HOM05D002661 ORTHO05D002786 3.1e-07 59.7 211 31.8
Haze_22627 Corylus avellana HOM05D002661 ORTHO05D002786 4.1e-07 59.3 193 31.1
Carub.0002s0656 Capsella rubella HOM05D012662 ORTHO05D008751 5.3e-07 58.9 282 28.7
TAR381G1099 Trochodendron aralioides HOM05D002661 ORTHO05D002786 5.3e-07 58.9 193 28.5
Duzib041G0251 Durio zibethinus HOM05D002661 ORTHO05D002786 9.0e-07 58.2 193 30.6
TAR624G1080 Trochodendron aralioides HOM05D007616 ORTHO05D008751 9.0e-07 58.2 63 55.6
Sopen03g006340 Solanum pennellii HOM05D002661 ORTHO05D002786 1.2e-06 57.8 207 26.6
Dinv40084 Davidia involucrata HOM05D002661 ORTHO05D002786 1.5e-06 57.4 205 31.2
FAN05G5322 Fragaria x ananassa HOM05D007616 ORTHO05D008751 1.5e-06 57.4 103 40.8
Nitab4.5_0006119g0020 Nicotiana tabacum HOM05D002661 ORTHO05D002786 2.6e-06 56.6 213 26.8
Solyc03g033550.3 Solanum lycopersicum HOM05D002661 ORTHO05D002786 2.6e-06 56.6 207 26.6
Prupe.1G366100 Prunus persica HOM05D002661 ORTHO05D002786 3.4e-06 56.2 202 28.7
Actinidia28594 Actinidia chinensis HOM05D002661 ORTHO05D002786 4.5e-06 55.8 188 27.7
COL.COLO4_26155 Corchorus olitorius HOM05D002661 ORTHO05D002786 4.5e-06 55.8 197 29.4
QL02p011493 Quercus lobata HOM05D002661 ORTHO05D002786 4.5e-06 55.8 195 29.7
Potri.002G023000 Populus trichocarpa HOM05D002661 ORTHO05D002786 5.9e-06 55.5 197 29.4
Ah.06g187740 Amaranthus hybridus HOM05D007616 ORTHO05D008751 1.0e-05 54.7 144 34.0
C04p26930 Brassica napus HOM05D007616 ORTHO05D008751 1.0e-05 54.7 51 54.9
BolC4t24105H Brassica oleracea HOM05D007616 ORTHO05D008751 1.0e-05 54.7 51 54.9


User provided reference genes

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