Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu058541.2 Olea europaea HOM05D006358 ORTHO05D008185 8.6e-260 899.8 459 100.0
Peaxi162Scf00192g00019 Petunia axillaris HOM05D006358 ORTHO05D008185 5.2e-156 555.1 458 65.9
Nitab4.5_0003436g0040 Nicotiana tabacum HOM05D006358 ORTHO05D008185 1.3e-154 550.4 458 65.3
Migut.D00538 Erythranthe guttata HOM05D006358 ORTHO05D008185 1.7e-154 550.1 458 66.4
CAN.G140.8 Capsicum annuum HOM05D006358 ORTHO05D008185 1.2e-152 543.9 454 64.3
PGSC0003DMG400032149 Solanum tuberosum HOM05D006358 ORTHO05D008185 2.0e-152 543.1 457 64.1
Nitab4.5_0005041g0010 Nicotiana tabacum HOM05D006358 ORTHO05D008185 3.5e-152 542.3 475 63.2
Cc01_g03170 Coffea canephora HOM05D006358 ORTHO05D008185 2.2e-151 539.7 414 67.9
Solyc01g006330.4 Solanum lycopersicum HOM05D006358 ORTHO05D008185 2.2e-151 539.7 457 63.7
Sopen01g002330 Solanum pennellii HOM05D006358 ORTHO05D008185 2.1e-149 533.1 457 63.2
Actinidia01838 Actinidia chinensis HOM05D006358 ORTHO05D008185 4.7e-149 531.9 439 64.5
TAR633G2634 Trochodendron aralioides HOM05D006358 ORTHO05D008185 1.0e-148 530.8 458 63.5
Hma1.2p1_0050F.1_g029070 Hydrangea macrophylla HOM05D006358 ORTHO05D008185 1.4e-148 530.4 475 61.5
Prupe.6G013900 Prunus persica HOM05D006358 ORTHO05D008185 1.3e-146 523.9 411 66.9
CiPaw.14G129700 Carya illinoinensis HOM05D006358 ORTHO05D008185 6.3e-146 521.5 449 62.1
DCAR_024375 Daucus carota HOM05D006358 ORTHO05D008185 7.0e-145 518.1 418 64.1
Manes.03G089800 Manihot esculenta HOM05D006358 ORTHO05D008185 3.5e-144 515.8 437 62.9
vmacro21759 Vaccinium macrocarpon HOM05D006358 ORTHO05D008185 5.9e-144 515.0 502 57.2
HanXRQChr11g0345451 Helianthus annuus HOM05D006358 ORTHO05D008185 1.7e-143 513.5 452 60.8
QL01p009947 Quercus lobata HOM05D006358 ORTHO05D008185 1.9e-142 510.0 453 60.9
Thecc.09G216800 Theobroma cacao HOM05D006358 ORTHO05D008185 4.3e-142 508.8 434 62.9
Cfa009639 Carpinus fangiana HOM05D006358 ORTHO05D008185 1.2e-141 507.3 451 61.2
Potri.001G011700 Populus trichocarpa HOM05D006358 ORTHO05D008185 1.2e-141 507.3 419 63.7
Gorai.004G092800 Gossypium raimondii HOM05D006358 ORTHO05D008185 4.7e-141 505.4 462 60.6
Sc09g0000330 Simmondsia chinensis HOM05D006358 ORTHO05D008185 4.7e-141 505.4 449 60.4
COL.COLO4_10429 Corchorus olitorius HOM05D006358 ORTHO05D008185 6.1e-141 505.0 459 59.7
Gohir.A08G078500 Gossypium hirsutum HOM05D006358 ORTHO05D008185 8.0e-141 504.6 460 60.9
GSVIVG01025367001 Vitis vinifera HOM05D006358 ORTHO05D008185 1.4e-140 503.8 450 61.6
EL10Ac4g10334 Beta vulgaris HOM05D006358 ORTHO05D008185 1.8e-140 503.4 461 60.3
Ciclev10015496m.g Citrus clementina HOM05D006358 ORTHO05D008185 4.0e-140 502.3 395 65.6
ECA248G2469 Erigeron canadensis HOM05D006358 ORTHO05D008185 6.8e-140 501.5 406 63.8
FAN21G1333 Fragaria x ananassa HOM05D000259 ORTHO05D008185 1.5e-139 500.4 396 66.7
TWI34G0094 Tripterygium wilfordii HOM05D006358 ORTHO05D008185 2.6e-139 499.6 426 63.4
FvH4_3g44350 Fragaria vesca HOM05D006358 ORTHO05D008185 3.4e-139 499.2 396 66.7
Duzib150G0556 Durio zibethinus HOM05D006358 ORTHO05D008185 4.4e-139 498.8 420 63.1
RcHm_v2.0_Chr5g0080731 Rosa chinensis HOM05D006358 ORTHO05D008185 5.7e-139 498.4 396 66.2
CANSAT54G1685 Cannabis sativa HOM05D006358 ORTHO05D008185 7.5e-139 498.0 417 64.0
PSO339G4609 Papaver somniferum HOM05D006358 ORTHO05D008185 7.5e-139 498.0 396 65.7
Rhsim13G0227500 Rhododendron simsii HOM05D006358 ORTHO05D009383 7.5e-139 498.0 464 59.5
SGA_v2.0_scaffold1G00759 Striga asiatica HOM05D006358 ORTHO05D008185 1.3e-138 497.3 456 59.6
arahy.Tifrunner.gnm1.ann1.TN3NK4 Arachis hypogaea HOM05D006358 ORTHO05D008185 1.7e-138 496.9 395 63.8
MD11G1015800 Malus domestica HOM05D006358 ORTHO05D008185 1.7e-138 496.9 401 64.1
Lj2A674T44 Lonicera japonica HOM05D006358 ORTHO05D008185 3.7e-138 495.7 436 60.6
PSO384G4606 Papaver somniferum HOM05D006358 ORTHO05D008185 1.4e-137 493.8 447 60.9
Lalb_Chr02g0144221 Lupinus albus HOM05D006358 ORTHO05D008185 2.4e-137 493.0 395 63.0
VMungo0720G2736 Vigna mungo HOM05D006358 ORTHO05D008185 2.4e-137 493.0 433 59.8
Aqoxy1G00024 Aquilegia oxysepala HOM05D006358 ORTHO05D008185 7.0e-137 491.5 413 63.4
unitig_0.g179 Utricularia gibba HOM05D006358 ORTHO05D008185 7.8e-136 488.0 438 58.0
Sabra01G0008700 Salix brachista HOM05D006358 ORTHO05D008185 3.0e-135 486.1 440 60.7
CsaV3_4G023700 Cucumis sativus L. HOM05D006358 ORTHO05D008185 3.9e-135 485.7 461 59.2
Eucgr.B02608 Eucalyptus grandis HOM05D006358 ORTHO05D008185 1.1e-134 484.2 414 62.1
PGR119G1893 Punica granatum HOM05D006358 ORTHO05D008185 1.5e-134 483.8 453 56.3
ClCG02G023710 Citrullus lanatus HOM05D006358 ORTHO05D008185 3.6e-133 479.2 418 62.7
Medtr1g116320 Medicago truncatula HOM05D006358 ORTHO05D008185 6.8e-132 474.9 412 59.7
Psat6g240320 Pisum sativum HOM05D003840 ORTHO05D004565 6.8e-132 474.9 425 57.9
THA.LOC104810430 Tarenaya hassleriana HOM05D006358 ORTHO05D008185 1.5e-131 473.8 446 56.7
Lj5g0002595 Lotus japonicus HOM05D006358 ORTHO05D008185 1.7e-130 470.3 416 58.9
TPR.G10386 Trifolium pratense HOM05D006358 ORTHO05D008185 2.9e-130 469.5 445 58.0
Aa31LG10G3410 Aethionema arabicum HOM05D006358 ORTHO05D008185 6.4e-130 468.4 434 57.6
Lsat_1_v5_gn_1_68460 Lactuca sativa HOM05D006358 ORTHO05D008185 6.4e-130 468.4 446 58.3
FAN16G0252 Fragaria x ananassa HOM05D006358 ORTHO05D008185 3.9e-127 459.1 424 59.9
Cpa.g.sc1127.2 Carica papaya HOM05D006358 ORTHO05D008185 3.3e-126 456.1 402 61.2
FAN11G2908 Fragaria x ananassa HOM05D000259 ORTHO05D008185 3.3e-126 456.1 386 63.7
Hund07562 Selenicereus undatus HOM05D006358 ORTHO05D008185 3.3e-126 456.1 413 60.5
FAN25G3418 Fragaria x ananassa HOM05D000259 ORTHO05D008185 1.2e-125 454.1 386 63.7
BcaB07g33557 Brassica carinata HOM05D006358 ORTHO05D008185 2.1e-125 453.4 396 58.6
MELO3C014648.2 Cucumis melo HOM05D006358 ORTHO05D008185 2.1e-125 453.4 437 58.8
Carub.0001s4002 Capsella rubella HOM05D006358 ORTHO05D008185 2.8e-125 453.0 437 53.8
A06p02670 Brassica napus HOM05D006358 ORTHO05D008185 3.6e-125 452.6 396 58.6
AT1G51110 Arabidopsis thaliana HOM05D006358 ORTHO05D008185 6.2e-125 451.8 440 54.5
BraA06t23476Z Brassica rapa HOM05D006358 ORTHO05D008185 8.1e-125 451.4 396 58.3
CARHR041130 Cardamine hirsuta HOM05D006358 ORTHO05D008185 1.1e-124 451.1 449 53.5
BcaC08g43281 Brassica carinata HOM05D006358 ORTHO05D008185 1.4e-124 450.7 396 58.3
C06p06310 Brassica napus HOM05D006358 ORTHO05D008185 1.4e-124 450.7 396 58.3
BolC6t35740H Brassica oleracea HOM05D006358 ORTHO05D008185 1.4e-124 450.7 396 58.3
Sp1g37840 Schrenkiella parvula HOM05D006358 ORTHO05D008185 1.4e-124 450.7 448 52.9
Thhalv10011532m.g Eutrema salsugineum HOM05D006358 ORTHO05D008185 6.8e-124 448.4 451 53.7
AL1G58910 Arabidopsis lyrata HOM05D006358 ORTHO05D008185 1.5e-123 447.2 446 53.6
Dinv36328 Davidia involucrata HOM05D006358 ORTHO05D008185 2.0e-123 446.8 393 62.8
Haze_23007 Corylus avellana HOM05D006358 ORTHO05D008185 6.6e-119 431.8 460 54.1
ATR0807G171 Amborella trichopoda HOM05D006358 ORTHO05D008185 1.5e-118 430.6 406 56.4
AUR62019212 Chenopodium quinoa HOM05D006358 ORTHO05D008185 6.2e-117 425.2 382 60.5
AUR62000042 Chenopodium quinoa HOM05D006358 ORTHO05D008185 6.0e-112 408.7 391 57.8
Glyma.20G244500 Glycine max HOM05D006358 ORTHO05D008185 7.3e-110 401.7 395 53.7
Ca_11387_v3 Cicer arietinum L. HOM05D006358 ORTHO05D008185 8.1e-109 398.3 265 70.9
Gohir.D08G088366 Gossypium hirsutum HOM05D006358 ORTHO05D008185 1.1e-108 397.9 381 59.6
Sed0014420 Sechium edule HOM05D006358 ORTHO05D008185 1.3e-106 391.0 338 63.3
CDE04G2070 Ceratophyllum demersum HOM05D006358 ORTHO05D008185 2.2e-106 390.2 441 50.6
Atru.chr3.2139 Acer truncatum HOM05D006358 ORTHO05D008185 2.1e-104 383.6 394 56.1
Os07g0470700 Oryza sativa ssp. japonica HOM05D006358 ORTHO05D008185 2.3e-103 380.2 397 52.4
MBI06_g07792_MAGBIO Magnolia biondii HOM05D006358 ORTHO05D008185 6.2e-101 372.1 424 50.9
Zm00001eb320130 Zea mays HOM05D006358 ORTHO05D008185 6.7e-95 352.1 400 48.8
Glyma.10G294800 Glycine max HOM05D006358 ORTHO05D008185 3.7e-93 346.3 418 46.4
Pp3c6_24510 Physcomitrium patens HOM05D006358 ORTHO05D008185 1.4e-92 344.4 393 47.8
Phvul.007G005400 Phaseolus vulgaris HOM05D006358 ORTHO05D008185 4.5e-91 339.3 395 48.6
Mapoly0065s0038 Marchantia polymorpha HOM05D006358 ORTHO05D008185 2.9e-90 336.7 395 46.3
FAN17G2784 Fragaria x ananassa HOM05D006358 ORTHO05D008185 1.6e-85 320.9 264 65.2
QL01p009975 Quercus lobata HOM05D006358 ORTHO05D008185 1.4e-81 307.8 350 52.6
AagrBONN_evm.TU.Sc2ySwM_340.166 Anthoceros agrestis HOM05D006358 ORTHO05D008185 1.0e-74 285.0 405 42.0
Nn2g15694 Nelumbo nucifera HOM05D006358 ORTHO05D008185 2.9e-74 283.5 436 42.0
Atru.BG.108.p Acer truncatum HOM05D006358 ORTHO05D008185 1.7e-61 241.1 214 62.1
Hma1.2p1_0535F.1_g173790 Hydrangea macrophylla HOM05D006358 ORTHO05D008185 1.1e-60 238.4 164 73.2
SMO145G0194 Selaginella moellendorffii HOM05D006358 ORTHO05D008185 8.0e-56 222.2 231 54.5
BcaB07g33599 Brassica carinata HOM05D006358 ORTHO05D008185 3.1e-52 210.3 135 77.0
SEGI_30485 Sequoiadendron giganteum HOM05D006358 ORTHO05D008185 1.5e-49 201.4 165 60.0
Cre03.g176350 Chlamydomonas reinhardtii HOM05D006358 ORTHO05D008185 4.0e-47 193.4 451 31.9
BcaC08g43283 Brassica carinata HOM05D006358 ORTHO05D008185 2.0e-38 164.5 141 56.0
BolC6t35742H Brassica oleracea HOM05D006358 ORTHO05D008185 2.0e-38 164.5 141 56.0
TWI34G1842 Tripterygium wilfordii HOM05D006358 ORTHO05D008185 1.8e-36 157.9 198 50.0
Hma1.2p1_0238F.1_g099790 Hydrangea macrophylla HOM05D006358 ORTHO05D008185 3.1e-36 157.1 103 71.8
C06p06330 Brassica napus HOM05D000466 ORTHO05D000331 7.0e-36 156.0 170 48.2
Ah.06g193120 Amaranthus hybridus HOM05D000044 ORTHO05D000051 1.5e-33 148.3 103 66.0
Cpa.g.sc1127.1 Carica papaya HOM05D006358 ORTHO05D008185 8.0e-32 142.5 160 51.2
TWI60G1657 Tripterygium wilfordii HOM05D006358 ORTHO05D008185 1.7e-29 134.8 163 49.1
SEGI_10329 Sequoiadendron giganteum HOM05D006358 ORTHO05D008185 2.2e-29 134.4 168 47.6
MD03G1014600 Malus domestica HOM05D006358 ORTHO05D008185 1.5e-25 121.7 116 50.0
HPP92_008465 Vanilla planifolia HOM05D006358 ORTHO05D008185 8.0e-24 115.9 121 51.2
MCO12G476 Micromonas commoda HOM05D006358 ORTHO05D008185 2.6e-22 110.9 240 35.4
CSS0022118 Camellia sinensis var. sinensis HOM05D006358 ORTHO05D008185 6.2e-16 89.7 64 68.8
HPP92_008464 Vanilla planifolia HOM05D006358 ORTHO05D008185 8.9e-15 85.9 122 45.9
CSS0000942 Camellia sinensis var. sinensis HOM05D006358 ORTHO05D008185 3.4e-14 84.0 51 74.5
Glyma.03G107232 Glycine max HOM05D006358 ORTHO05D000607 4.9e-13 80.1 111 40.5
CSS0018817 Camellia sinensis var. sinensis HOM05D006358 ORTHO05D008185 1.4e-12 78.6 46 84.8
SMO222G0017 Selaginella moellendorffii HOM05D006358 ORTHO05D008185 7.0e-12 76.3 156 39.1
EL10As7g23744 Beta vulgaris HOM05D004524 ORTHO05D014474 5.0e-10 70.1 75 52.0
MCO09G399 Micromonas commoda HOM05D006358 ORTHO05D008185 1.5e-09 68.6 241 28.2
Ah.06g193130 Amaranthus hybridus HOM05D006358 ORTHO05D008185 1.6e-08 65.1 46 69.6
Mapoly0070s0031 Marchantia polymorpha HOM05D002234 ORTHO05D002254 8.1e-08 62.8 245 27.3
A01p13620 Brassica napus HOM05D002234 ORTHO05D002254 1.1e-07 62.4 245 27.8
BraA01t01304Z Brassica rapa HOM05D002234 ORTHO05D002254 1.1e-07 62.4 245 27.8
BcaC09g51148 Brassica carinata HOM05D002234 ORTHO05D002254 1.4e-07 62.0 245 27.8
C01p16500 Brassica napus HOM05D002234 ORTHO05D002254 1.4e-07 62.0 245 27.8
BolC1t01599H Brassica oleracea HOM05D002234 ORTHO05D002254 1.4e-07 62.0 245 27.8
Thhalv10025758m.g Eutrema salsugineum HOM05D002234 ORTHO05D002254 5.2e-07 60.1 252 28.6
CBR_g49209 Chara braunii HOM05D002234 ORTHO05D002254 6.8e-07 59.7 252 26.6
SMO367G0795 Selaginella moellendorffii HOM05D002234 ORTHO05D002254 6.8e-07 59.7 272 26.5
AL7G31390 Arabidopsis lyrata HOM05D002234 ORTHO05D002254 1.5e-06 58.5 245 27.3
AT4G22240 Arabidopsis thaliana HOM05D002234 ORTHO05D002254 1.5e-06 58.5 245 26.9
BcaNung03751 Brassica carinata HOM05D002234 ORTHO05D002254 1.5e-06 58.5 252 28.6
Carub.0007s1908 Capsella rubella HOM05D002234 ORTHO05D002254 1.5e-06 58.5 245 26.9
AagrBONN_evm.TU.Sc2ySwM_369.590 Anthoceros agrestis HOM05D002234 ORTHO05D002254 3.4e-06 57.4 243 27.2
ClCG01G021610 Citrullus lanatus HOM05D002234 ORTHO05D002254 3.4e-06 57.4 269 25.3
THA.LOC104812983 Tarenaya hassleriana HOM05D002234 ORTHO05D002254 3.4e-06 57.4 269 27.1
CARHR229130 Cardamine hirsuta HOM05D002234 ORTHO05D002254 5.8e-06 56.6 285 26.3


User provided reference genes

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