Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu058438.1 Olea europaea HOM05D002464 ORTHO05D002530 1.4e-93 346.3 179 100.0
Oeu012704.1 Olea europaea HOM05D002464 ORTHO05D002530 9.7e-42 174.1 171 60.2
SGA_v2.0_scaffold4G02145 Striga asiatica HOM05D002464 ORTHO05D002530 1.7e-41 173.3 173 58.4
MSTRG.14263 Avicennia marina HOM05D002464 ORTHO05D002530 6.3e-41 171.4 173 60.7
Migut.H02055 Erythranthe guttata HOM05D002464 ORTHO05D002530 1.5e-39 166.8 173 57.8
SalBow7G1952 Salvia bowleyana HOM05D002464 ORTHO05D002530 2.0e-39 166.4 174 56.9
SalBow7G3076 Salvia bowleyana HOM05D002464 ORTHO05D002530 2.0e-39 166.4 174 56.9
Dinv21342 Davidia involucrata HOM05D002464 ORTHO05D002530 3.4e-39 165.6 171 56.7
Dinv26634 Davidia involucrata HOM05D002464 ORTHO05D002530 1.7e-38 163.3 171 56.1
Lj8C140T3 Lonicera japonica HOM05D002464 ORTHO05D002530 2.7e-36 156.0 171 55.6
Peaxi162Scf00111g00526 Petunia axillaris HOM05D002464 ORTHO05D002530 3.6e-36 155.6 173 53.8
CSS0000059 Camellia sinensis var. sinensis HOM05D002464 ORTHO05D002530 4.7e-36 155.2 172 55.2
CSS0006609 Camellia sinensis var. sinensis HOM05D002464 ORTHO05D002530 4.7e-36 155.2 172 55.2
Solyc07g056040.3 Solanum lycopersicum HOM05D002464 ORTHO05D002530 1.0e-35 154.1 173 53.2
Sopen07g029390 Solanum pennellii HOM05D002464 ORTHO05D002530 1.4e-35 153.7 174 52.9
PGSC0003DMG400031087 Solanum tuberosum HOM05D002464 ORTHO05D002530 1.4e-35 153.7 174 52.3
unitig_37.g12552 Utricularia gibba HOM05D002464 ORTHO05D002530 6.7e-35 151.4 171 50.3
Rhsim06G0183200 Rhododendron simsii HOM05D002464 ORTHO05D002530 5.7e-34 148.3 161 54.0
Haze_14346 Corylus avellana HOM05D002464 ORTHO05D002530 9.7e-34 147.5 160 53.8
Sopen10g003570 Solanum pennellii HOM05D002464 ORTHO05D002530 1.7e-33 146.7 169 52.1
PGSC0003DMG400021246 Solanum tuberosum HOM05D002464 ORTHO05D002530 1.7e-33 146.7 167 52.1
Cfa007735 Carpinus fangiana HOM05D002464 ORTHO05D002530 3.7e-33 145.6 160 53.1
Duzib268G0621 Durio zibethinus HOM05D002464 ORTHO05D002530 3.7e-33 145.6 171 49.7
Cc05_g09960 Coffea canephora HOM05D002464 ORTHO05D002530 1.4e-32 143.7 152 54.6
COL.COLO4_17388 Corchorus olitorius HOM05D002464 ORTHO05D002530 1.4e-32 143.7 171 51.5
AUR62019445 Chenopodium quinoa HOM05D002464 ORTHO05D002530 1.8e-32 143.3 165 49.7
Duzib213G0138 Durio zibethinus HOM05D002464 ORTHO05D002530 1.8e-32 143.3 166 50.6
AUR62039186 Chenopodium quinoa HOM05D002464 ORTHO05D002530 2.4e-32 142.9 165 49.1
Gohir.A01G040500 Gossypium hirsutum HOM05D002464 ORTHO05D002530 2.4e-32 142.9 171 48.5
Actinidia12336 Actinidia chinensis HOM05D002464 ORTHO05D002530 3.1e-32 142.5 168 51.2
CiPaw.03G079800 Carya illinoinensis HOM05D002464 ORTHO05D002530 3.1e-32 142.5 168 50.6
Gohir.D01G028100 Gossypium hirsutum HOM05D002464 ORTHO05D002530 4.1e-32 142.1 171 48.0
Gorai.002G037500 Gossypium raimondii HOM05D002464 ORTHO05D002530 4.1e-32 142.1 165 49.7
Solyc10g007660.3 Solanum lycopersicum HOM05D002464 ORTHO05D002530 4.1e-32 142.1 169 50.3
Lsat_1_v5_gn_7_99420 Lactuca sativa HOM05D002464 ORTHO05D002530 1.2e-31 140.6 169 47.9
Hund02297 Selenicereus undatus HOM05D002464 ORTHO05D002530 1.2e-31 140.6 165 48.5
ECA236G2193 Erigeron canadensis HOM05D002464 ORTHO05D002530 4.5e-31 138.7 169 47.3
TWI39G1036 Tripterygium wilfordii HOM05D002464 ORTHO05D002530 4.5e-31 138.7 170 48.8
vmacro12031 Vaccinium macrocarpon HOM05D002464 ORTHO05D002530 4.5e-31 138.7 166 51.2
Potri.011G140200 Populus trichocarpa HOM05D002464 ORTHO05D002530 5.9e-31 138.3 170 47.6
EL10Ac4g08532 Beta vulgaris HOM05D002464 ORTHO05D002530 7.7e-31 137.9 164 51.2
Thecc.07G148900 Theobroma cacao HOM05D002464 ORTHO05D002530 7.7e-31 137.9 158 51.3
unitig_746.g26691 Utricularia gibba HOM05D002464 ORTHO05D002530 1.0e-30 137.5 157 50.3
Sabra11G0126300 Salix brachista HOM05D002464 ORTHO05D002530 1.3e-30 137.1 172 48.8
TAR626G0125 Trochodendron aralioides HOM05D002464 ORTHO05D002530 1.3e-30 137.1 160 51.9
GSVIVG01010256001 Vitis vinifera HOM05D002464 ORTHO05D002530 1.3e-30 137.1 151 51.0
Ciclev10022266m.g Citrus clementina HOM05D002464 ORTHO05D002530 1.7e-30 136.7 171 47.4
DCAR_013809 Daucus carota HOM05D002464 ORTHO05D002530 2.9e-30 136.0 164 50.0
HanXRQChr15g0492391 Helianthus annuus HOM05D002464 ORTHO05D002530 5.0e-30 135.2 169 47.3
Sc03g0007850 Simmondsia chinensis HOM05D002464 ORTHO05D002530 6.5e-30 134.8 158 49.4
DCAR_017558 Daucus carota HOM05D002464 ORTHO05D002530 8.5e-30 134.4 164 49.4
Glyma.18G045300 Glycine max HOM05D002464 ORTHO05D002530 2.5e-29 132.9 171 47.4
Nn2g11844 Nelumbo nucifera HOM05D002464 ORTHO05D002530 3.2e-29 132.5 170 47.1
THA.LOC104813973 Tarenaya hassleriana HOM05D002464 ORTHO05D002530 3.2e-29 132.5 158 48.7
Aqoxy7G00906 Aquilegia oxysepala HOM05D002464 ORTHO05D002530 7.2e-29 131.3 175 46.3
CiPaw.04G050500 Carya illinoinensis HOM05D002464 ORTHO05D002530 1.6e-28 130.2 158 48.1
Glyma.11G208600 Glycine max HOM05D002464 ORTHO05D002530 1.6e-28 130.2 171 46.8
C08p17750 Brassica napus HOM05D002464 ORTHO05D002530 2.1e-28 129.8 173 46.8
BolC8t49401H Brassica oleracea HOM05D002464 ORTHO05D002530 2.1e-28 129.8 173 46.8
BcaC05g25657 Brassica carinata HOM05D002464 ORTHO05D002530 2.7e-28 129.4 173 46.8
C05p15620 Brassica napus HOM05D002464 ORTHO05D002530 2.7e-28 129.4 173 46.8
BolC5t30269H Brassica oleracea HOM05D002464 ORTHO05D002530 2.7e-28 129.4 173 46.8
Manes.03G090700 Manihot esculenta HOM05D002464 ORTHO05D002530 4.7e-28 128.6 172 45.9
BcaC07g38834 Brassica carinata HOM05D002464 ORTHO05D002530 6.1e-28 128.3 173 46.2
A06p13120 Brassica napus HOM05D002464 ORTHO05D002530 6.1e-28 128.3 173 46.2
BraA06t24470Z Brassica rapa HOM05D002464 ORTHO05D002530 6.1e-28 128.3 173 46.2
A08p31060 Brassica napus HOM05D002464 ORTHO05D002530 8.0e-28 127.9 173 46.2
BraA08t35034Z Brassica rapa HOM05D002464 ORTHO05D002530 8.0e-28 127.9 173 46.2
Eucgr.F03189 Eucalyptus grandis HOM05D002464 ORTHO05D002530 8.0e-28 127.9 174 43.7
MD06G1011400 Malus domestica HOM05D002464 ORTHO05D002530 8.0e-28 127.9 158 49.4
Potri.001G436400 Populus trichocarpa HOM05D002464 ORTHO05D002530 8.0e-28 127.9 165 46.1
BcaB07g34042 Brassica carinata HOM05D002464 ORTHO05D002530 1.4e-27 127.1 173 45.7
AT1G17200 Arabidopsis thaliana HOM05D002464 ORTHO05D002530 1.8e-27 126.7 173 45.1
Cpa.g.sc25.209 Carica papaya HOM05D002464 ORTHO05D002530 1.8e-27 126.7 171 43.9
DCAR_019647 Daucus carota HOM05D002464 ORTHO05D002530 1.8e-27 126.7 171 45.0
BcaB03g13013 Brassica carinata HOM05D002464 ORTHO05D002530 2.3e-27 126.3 173 45.7
Carub.0001s1695 Capsella rubella HOM05D002464 ORTHO05D002530 2.3e-27 126.3 171 46.2
Lalb_Chr04g0251551 Lupinus albus HOM05D002464 ORTHO05D002530 2.3e-27 126.3 163 46.0
AL1G29440 Arabidopsis lyrata HOM05D002464 ORTHO05D002530 3.0e-27 125.9 173 45.1
Manes.15G101200 Manihot esculenta HOM05D002464 ORTHO05D002530 3.9e-27 125.6 173 44.5
CANSAT35G0030 Cannabis sativa HOM05D002464 ORTHO05D002530 5.2e-27 125.2 176 44.3
BcaC07g41408 Brassica carinata HOM05D002464 ORTHO05D002530 6.7e-27 124.8 171 46.2
A09p60500 Brassica napus HOM05D002464 ORTHO05D002530 6.7e-27 124.8 171 46.2
BraA09t41421Z Brassica rapa HOM05D002464 ORTHO05D002530 6.7e-27 124.8 171 46.2
Prupe.5G013700 Prunus persica HOM05D002464 ORTHO05D002530 6.7e-27 124.8 156 48.7
Sp1g15340 Schrenkiella parvula HOM05D002464 ORTHO05D002530 6.7e-27 124.8 173 45.7
Atru.chr2.1824 Acer truncatum HOM05D002464 ORTHO05D002530 8.8e-27 124.4 158 46.2
CARHR017780 Cardamine hirsuta HOM05D002464 ORTHO05D002530 8.8e-27 124.4 170 45.3
HanXRQChr11g0330051 Helianthus annuus HOM05D002464 ORTHO05D002530 8.8e-27 124.4 169 42.6
Ca_05752_v3 Cicer arietinum L. HOM05D002464 ORTHO05D002530 1.1e-26 124.0 170 47.1
Ca_29735_v3 Cicer arietinum L. HOM05D002464 ORTHO05D002530 1.1e-26 124.0 170 47.1
Thhalv10008792m.g Eutrema salsugineum HOM05D002464 ORTHO05D002530 1.5e-26 123.6 174 44.3
ATR0006G070 Amborella trichopoda HOM05D002464 ORTHO05D002530 2.0e-26 123.2 158 43.7
LjContig00141g0008303 Lotus japonicus HOM05D002464 ORTHO05D002530 2.0e-26 123.2 173 46.2
VMungo0540G0958 Vigna mungo HOM05D002464 ORTHO05D002530 2.0e-26 123.2 160 46.2
Phvul.006G085600 Phaseolus vulgaris HOM05D002464 ORTHO05D002530 2.6e-26 122.9 159 46.5
PGR031G2898 Punica granatum HOM05D002464 ORTHO05D002530 3.3e-26 122.5 154 47.4
Aa31LG4G2600 Aethionema arabicum HOM05D002464 ORTHO05D002530 9.7e-26 120.9 157 45.9
Medtr3g064310 Medicago truncatula HOM05D002464 ORTHO05D002530 1.3e-25 120.6 174 44.3
Medtr5g076480 Medicago truncatula HOM05D002464 ORTHO05D002530 1.7e-25 120.2 170 45.3
Sed0024598 Sechium edule HOM05D002464 ORTHO05D002530 1.7e-25 120.2 171 41.5
MBI13_g05968_MAGBIO Magnolia biondii HOM05D002464 ORTHO05D002530 2.2e-25 119.8 171 42.1
TPR.G35761 Trifolium pratense HOM05D002464 ORTHO05D002530 2.2e-25 119.8 159 45.9
C08p43990 Brassica napus HOM05D002464 ORTHO05D002530 3.7e-25 119.0 171 44.4
BolC8t51948H Brassica oleracea HOM05D002464 ORTHO05D002530 3.7e-25 119.0 171 44.4
BcaC07g41432 Brassica carinata HOM05D002464 ORTHO05D002530 4.8e-25 118.6 171 44.4
FAN08G3406 Fragaria x ananassa HOM05D002464 ORTHO05D002530 4.8e-25 118.6 159 47.2
FvH4_5g24950 Fragaria vesca HOM05D002464 ORTHO05D002530 6.3e-25 118.2 159 46.5
FAN13G0338 Fragaria x ananassa HOM05D002464 ORTHO05D002530 6.3e-25 118.2 159 46.5
FAN18G2236 Fragaria x ananassa HOM05D002464 ORTHO05D002530 6.3e-25 118.2 159 46.5
Lj6g0007059 Lotus japonicus HOM05D002464 ORTHO05D002530 6.3e-25 118.2 160 46.9
Lalb_Chr15g0085341 Lupinus albus HOM05D002464 ORTHO05D002530 1.1e-24 117.5 159 47.2
Psat2g044080 Pisum sativum HOM05D002464 ORTHO05D002530 1.1e-24 117.5 168 44.6
THA.LOC104808074 Tarenaya hassleriana HOM05D002464 ORTHO05D002530 1.8e-24 116.7 157 45.9
arahy.Tifrunner.gnm1.ann1.60CVB0 Arachis hypogaea HOM05D002464 ORTHO05D002530 3.1e-24 115.9 156 46.2
arahy.Tifrunner.gnm1.ann1.WWQ11A Arachis hypogaea HOM05D002464 ORTHO05D002530 3.1e-24 115.9 156 46.2
TPR.G37309 Trifolium pratense HOM05D002464 ORTHO05D002530 3.1e-24 115.9 159 45.3
VMungo0647G1093 Vigna mungo HOM05D002464 ORTHO05D002530 3.1e-24 115.9 173 43.4
Psat0s140g0040 Pisum sativum HOM05D002464 ORTHO05D002530 5.3e-24 115.2 175 42.3
Phvul.008G242000 Phaseolus vulgaris HOM05D002464 ORTHO05D002530 1.2e-23 114.0 158 44.3
ClCG07G010640 Citrullus lanatus HOM05D002464 ORTHO05D002530 2.0e-23 113.2 171 40.9
MELO3C016174.2 Cucumis melo HOM05D002464 ORTHO05D002530 2.0e-23 113.2 163 42.3
CsaV3_4G007660 Cucumis sativus L. HOM05D002464 ORTHO05D002530 2.0e-23 113.2 163 42.3
TPR.G40028 Trifolium pratense HOM05D002464 ORTHO05D002530 5.9e-23 111.7 158 44.9
Glyma.14G208900 Glycine max HOM05D002464 ORTHO05D002530 1.0e-22 110.9 162 43.8
Actinidia20601 Actinidia chinensis HOM05D002464 ORTHO05D002530 2.9e-22 109.4 124 51.6
Os04g0281900 Oryza sativa ssp. japonica HOM05D002464 ORTHO05D002530 5.0e-22 108.6 168 41.1
HPP92_013038 Vanilla planifolia HOM05D002464 ORTHO05D002530 5.0e-22 108.6 156 42.9
Nitab4.5_0001612g0150 Nicotiana tabacum HOM05D002464 ORTHO05D002530 1.5e-21 107.1 129 49.6
Zm00001eb087050 Zea mays HOM05D002464 ORTHO05D002530 1.9e-21 106.7 169 39.1
PSO063G4850 Papaver somniferum HOM05D002464 ORTHO05D002530 9.4e-21 104.4 166 41.0
Sp3g12670 Schrenkiella parvula HOM05D002464 ORTHO05D002530 1.2e-20 104.0 157 42.0
QL02p063963 Quercus lobata HOM05D002464 ORTHO05D002530 1.6e-20 103.6 241 33.6
arahy.Tifrunner.gnm1.ann1.U21G6C Arachis hypogaea HOM05D002464 ORTHO05D002530 2.1e-20 103.2 160 43.1
arahy.Tifrunner.gnm1.ann1.NCE19X Arachis hypogaea HOM05D002464 ORTHO05D002530 3.6e-20 102.4 160 43.1
Nitab4.5_0004166g0060 Nicotiana tabacum HOM05D002464 ORTHO05D002530 3.6e-20 102.4 121 49.6
Zm00001eb420360 Zea mays HOM05D002464 ORTHO05D002530 3.6e-20 102.4 161 38.5
PSO782G4744 Papaver somniferum HOM05D002464 ORTHO05D002530 4.7e-20 102.1 166 40.4
Thhalv10021621m.g Eutrema salsugineum HOM05D002464 ORTHO05D002530 8.0e-20 101.3 155 40.6
Carub.0003s1409 Capsella rubella HOM05D002464 ORTHO05D002530 1.0e-19 100.9 157 41.4
Nitab4.5_0002209g0090 Nicotiana tabacum HOM05D002464 ORTHO05D002530 1.0e-19 100.9 165 43.6
AL3G26720 Arabidopsis lyrata HOM05D002464 ORTHO05D002530 2.3e-19 99.8 157 41.4
AT3G14380 Arabidopsis thaliana HOM05D002464 ORTHO05D002530 2.3e-19 99.8 157 41.4
BcaB06g25390 Brassica carinata HOM05D002464 ORTHO05D002530 1.5e-18 97.1 156 39.7
Hma1.2p1_0854F.1_g228830 Hydrangea macrophylla HOM05D002464 ORTHO05D002530 2.6e-18 96.3 169 39.6
RcHm_v2.0_Chr7g0215251 Rosa chinensis HOM05D002464 ORTHO05D002530 2.6e-18 96.3 177 41.2
BraA05t22315Z Brassica rapa HOM05D002464 ORTHO05D002530 4.8e-17 92.0 139 39.6
A05p35010 Brassica napus HOM05D002464 ORTHO05D002530 8.3e-17 91.3 157 37.6
CDE04G2121 Ceratophyllum demersum HOM05D002464 ORTHO05D002530 1.4e-16 90.5 154 35.7
CDE06G1188 Ceratophyllum demersum HOM05D002464 ORTHO05D002530 1.4e-16 90.5 168 33.3
BcaC05g29088 Brassica carinata HOM05D002464 ORTHO05D002530 1.8e-16 90.1 157 36.9
C05p52960 Brassica napus HOM05D002464 ORTHO05D002530 1.8e-16 90.1 157 36.9
BolC5t33973H Brassica oleracea HOM05D002464 ORTHO05D002530 1.8e-16 90.1 157 36.9
SEGI_07260 Sequoiadendron giganteum HOM05D002464 ORTHO05D002530 1.8e-16 90.1 154 35.7
Aa31LG8G1640 Aethionema arabicum HOM05D002464 ORTHO05D002530 2.9e-14 82.8 159 34.0
CARHR089400 Cardamine hirsuta HOM05D002464 ORTHO05D002530 2.9e-14 82.8 148 37.8
TPR.G37303 Trifolium pratense HOM05D002464 ORTHO05D002530 3.8e-14 82.4 143 41.3
Nitab4.5_0000923g0230 Nicotiana tabacum HOM05D002464 ORTHO05D002530 5.7e-10 68.6 90 48.9
ATR0794G005 Amborella trichopoda HOM05D002464 ORTHO05D002530 1.8e-08 63.5 150 29.3
PSO063G5128 Papaver somniferum HOM05D002464 ORTHO05D002530 2.4e-08 63.2 78 46.2
SEGI_26504 Sequoiadendron giganteum HOM05D002464 ORTHO05D002530 2.4e-08 63.2 92 41.3
MBI02_g28410_MAGBIO Magnolia biondii HOM05D002464 ORTHO05D002530 5.4e-08 62.0 157 26.8
Ciclev10009601m.g Citrus clementina HOM05D002464 ORTHO05D002530 1.2e-07 60.8 164 28.0
PSO541G3037 Papaver somniferum HOM05D002464 ORTHO05D002530 1.2e-07 60.8 78 46.2
Atru.chr2.3449 Acer truncatum HOM05D002464 ORTHO05D002530 1.6e-07 60.5 161 26.7
TWI38G1248 Tripterygium wilfordii HOM05D002464 ORTHO05D002530 2.7e-07 59.7 151 27.2
PSO210G5772 Papaver somniferum HOM05D002464 ORTHO05D002530 3.5e-07 59.3 78 44.9
Aqoxy1G02113 Aquilegia oxysepala HOM05D002464 ORTHO05D002530 5.9e-07 58.5 155 26.5
Gohir.D05G372100 Gossypium hirsutum HOM05D002464 ORTHO05D002530 5.9e-07 58.5 150 28.0
Gorai.009G440300 Gossypium raimondii HOM05D002464 ORTHO05D002530 7.7e-07 58.2 150 28.0
Sc16g0005950 Simmondsia chinensis HOM05D002464 ORTHO05D002530 7.7e-07 58.2 150 28.7
HPP92_017593 Vanilla planifolia HOM05D002464 ORTHO05D002530 7.7e-07 58.2 156 25.6
Ah.06g190820 Amaranthus hybridus HOM05D002464 ORTHO05D002530 1.0e-06 57.8 138 32.6
Os02g0219900 Oryza sativa ssp. japonica HOM05D002464 ORTHO05D002530 1.0e-06 57.8 161 26.7
PSO541G6174 Papaver somniferum HOM05D002464 ORTHO05D002530 1.7e-06 57.0 78 43.6
CDE11G0801 Ceratophyllum demersum HOM05D002464 ORTHO05D002530 2.3e-06 56.6 148 25.0
Rhsim06G0218300 Rhododendron simsii HOM05D002464 ORTHO05D002530 2.3e-06 56.6 150 27.3
EL10Ac4g07795 Beta vulgaris HOM05D002464 ORTHO05D002530 6.6e-06 55.1 156 23.1
PGR083G1862 Punica granatum HOM05D002464 ORTHO05D002530 6.6e-06 55.1 157 29.3
vmacro02229 Vaccinium macrocarpon HOM05D002464 ORTHO05D002530 6.6e-06 55.1 150 29.3
GSVIVG01037665001 Vitis vinifera HOM05D002464 ORTHO05D002530 6.6e-06 55.1 152 26.3
Actinidia05091 Actinidia chinensis HOM05D002464 ORTHO05D002530 8.6e-06 54.7 150 28.7
Solyc12g005070.2 Solanum lycopersicum HOM05D002464 ORTHO05D002530 8.6e-06 54.7 164 26.2
Thecc.07G034500 Theobroma cacao HOM05D002464 ORTHO05D002530 8.6e-06 54.7 149 25.5


User provided reference genes

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