Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu058434.1 Olea europaea HOM05D003649 ORTHO05D004498 1.2e-256 889.4 459 100.0
SGA_v2.0_scaffold73G24356 Striga asiatica HOM05D003649 ORTHO05D004498 9.0e-193 677.2 434 83.6
SalBow5G3252 Salvia bowleyana HOM05D003649 ORTHO05D004498 1.3e-191 673.3 432 81.5
MSTRG.6707 Avicennia marina HOM05D003649 ORTHO05D004498 2.7e-189 665.6 437 80.8
CSS0028028 Camellia sinensis var. sinensis HOM05D003649 ORTHO05D004498 2.7e-189 665.6 459 76.5
SalBow6G0551 Salvia bowleyana HOM05D003649 ORTHO05D004498 3.0e-188 662.1 432 81.2
SalBow8G0566 Salvia bowleyana HOM05D003649 ORTHO05D004498 8.7e-188 660.6 432 81.0
CSS0018218 Camellia sinensis var. sinensis HOM05D003649 ORTHO05D004498 9.7e-187 657.1 459 75.2
Actinidia14919 Actinidia chinensis HOM05D003649 ORTHO05D004498 8.2e-186 654.1 459 75.4
Hma1.2p1_0505F.1_g168130 Hydrangea macrophylla HOM05D003649 ORTHO05D004498 6.7e-180 634.4 460 73.3
Duzib168G1903 Durio zibethinus HOM05D003649 ORTHO05D004498 2.2e-178 629.4 458 72.3
Cfa011266 Carpinus fangiana HOM05D003649 ORTHO05D004498 2.6e-176 622.5 463 71.5
HanXRQChr13g0424451 Helianthus annuus HOM05D003649 ORTHO05D004498 3.4e-176 622.1 464 71.8
CiPaw.08G013900 Carya illinoinensis HOM05D003649 ORTHO05D004498 7.7e-176 620.9 463 70.6
TWI38G0227 Tripterygium wilfordii HOM05D003649 ORTHO05D004498 9.4e-174 614.0 468 70.5
Gorai.001G124600 Gossypium raimondii HOM05D003649 ORTHO05D004498 1.8e-172 609.8 456 70.8
PGR142G4312 Punica granatum HOM05D003649 ORTHO05D004498 1.8e-172 609.8 461 71.1
Gohir.D07G116200 Gossypium hirsutum HOM05D003649 ORTHO05D004498 3.9e-172 608.6 456 70.8
Gohir.A07G112700 Gossypium hirsutum HOM05D003649 ORTHO05D004498 5.2e-172 608.2 456 70.6
DCAR_002270 Daucus carota HOM05D003649 ORTHO05D004498 3.3e-171 605.5 463 72.8
Lsat_1_v5_gn_5_148460 Lactuca sativa HOM05D003649 ORTHO05D004498 1.3e-170 603.6 463 69.3
vmacro10596 Vaccinium macrocarpon HOM05D003649 ORTHO05D004498 2.8e-170 602.4 455 71.9
Potri.001G394000 Populus trichocarpa HOM05D003649 ORTHO05D004498 1.4e-169 600.1 459 69.5
GSVIVG01011050001 Vitis vinifera HOM05D003649 ORTHO05D004498 4.1e-169 598.6 460 69.6
Potri.011G112500 Populus trichocarpa HOM05D003649 ORTHO05D004498 5.3e-169 598.2 461 69.0
Rhsim09G0104200 Rhododendron simsii HOM05D003649 ORTHO05D004498 2.0e-168 596.3 431 73.8
CANSAT01G2347 Cannabis sativa HOM05D003649 ORTHO05D004498 3.2e-166 589.0 461 67.9
Actinidia37054 Actinidia chinensis HOM05D003649 ORTHO05D004498 5.5e-166 588.2 404 76.7
Peaxi162Scf00111g00723 Petunia axillaris HOM05D003649 ORTHO05D004498 1.2e-165 587.0 460 67.4
Migut.M00658 Erythranthe guttata HOM05D003649 ORTHO05D004498 3.6e-165 585.5 442 71.9
Phvul.004G052800 Phaseolus vulgaris HOM05D003649 ORTHO05D004498 3.6e-165 585.5 460 68.7
Manes.14G150400 Manihot esculenta HOM05D003649 ORTHO05D004498 4.7e-165 585.1 462 67.3
Thecc.09G274600 Theobroma cacao HOM05D003649 ORTHO05D004498 1.0e-164 583.9 456 68.4
GSVIVG01038352001 Vitis vinifera HOM05D003649 ORTHO05D004498 5.2e-164 581.6 425 72.9
Manes.14G152600 Manihot esculenta HOM05D003649 ORTHO05D004498 3.3e-163 578.9 462 66.7
Prupe.4G148600 Prunus persica HOM05D003649 ORTHO05D004498 4.4e-163 578.6 469 67.2
COL.COLO4_24336 Corchorus olitorius HOM05D003649 ORTHO05D004498 2.2e-162 576.2 457 67.2
Sc26g0001160 Simmondsia chinensis HOM05D003649 ORTHO05D004498 2.2e-162 576.2 433 70.4
Nitab4.5_0001924g0070 Nicotiana tabacum HOM05D003649 ORTHO05D004498 2.8e-162 575.9 416 73.1
Hund24921 Selenicereus undatus HOM05D003649 ORTHO05D004498 7.0e-161 571.2 458 65.5
unitig_748.g7599 Utricularia gibba HOM05D003649 ORTHO05D004498 7.0e-161 571.2 433 70.4
QL02p065039 Quercus lobata HOM05D003649 ORTHO05D004498 1.6e-160 570.1 444 70.5
Glyma.05G087100 Glycine max HOM05D003649 ORTHO05D004498 2.0e-160 569.7 460 66.3
Nn7g38381 Nelumbo nucifera HOM05D003649 ORTHO05D004498 5.9e-160 568.2 460 66.3
Cc05_g10190 Coffea canephora HOM05D003649 ORTHO05D004498 8.5e-159 564.3 428 72.4
Aqoxy1G02521 Aquilegia oxysepala HOM05D003649 ORTHO05D004498 1.1e-158 563.9 414 70.3
Ca_25060_v3 Cicer arietinum L. HOM05D003649 ORTHO05D004498 1.2e-157 560.5 463 66.1
Lj2g0021753 Lotus japonicus HOM05D003649 ORTHO05D004498 1.2e-157 560.5 464 65.9
ECA236G2713 Erigeron canadensis HOM05D003649 ORTHO05D004498 1.6e-157 560.1 452 66.2
Atru.chr3.3291 Acer truncatum HOM05D003649 ORTHO05D004498 4.4e-155 552.0 430 67.9
PGSC0003DMG400027653 Solanum tuberosum HOM05D003649 ORTHO05D004498 5.7e-155 551.6 463 63.7
MD10G1195400 Malus domestica HOM05D003649 ORTHO05D004498 1.3e-154 550.4 432 70.8
Sabra11G0099700 Salix brachista HOM05D003649 ORTHO05D004498 1.3e-154 550.4 438 67.6
PSO675G2950 Papaver somniferum HOM05D003649 ORTHO05D004498 6.3e-154 548.1 458 65.3
Migut.M00659 Erythranthe guttata HOM05D003649 ORTHO05D004498 1.1e-153 547.4 472 65.0
Rhsim09G0104400 Rhododendron simsii HOM05D003649 ORTHO05D004498 1.8e-153 546.6 458 66.8
EL10Ac3g06484 Beta vulgaris HOM05D003649 ORTHO05D004498 4.1e-153 545.4 423 68.6
Lalb_Chr21g0316901 Lupinus albus HOM05D003649 ORTHO05D004498 7.0e-153 544.7 437 68.0
TPR.G34458 Trifolium pratense HOM05D003649 ORTHO05D004498 5.9e-152 541.6 507 59.6
Aa31LG2G14410 Aethionema arabicum HOM05D003649 ORTHO05D004498 7.7e-152 541.2 465 63.0
MELO3C024126.2 Cucumis melo HOM05D003649 ORTHO05D004498 1.7e-151 540.0 458 63.8
PSO541G1065 Papaver somniferum HOM05D003649 ORTHO05D004498 1.1e-150 537.3 457 64.6
Ah.13g074570 Amaranthus hybridus HOM05D003649 ORTHO05D004498 1.9e-150 536.6 481 62.4
CsaV3_7G025330 Cucumis sativus L. HOM05D003649 ORTHO05D004498 3.2e-150 535.8 458 63.3
Glyma.03G190900 Glycine max HOM05D003649 ORTHO05D004498 3.2e-150 535.8 460 63.7
CARHR286950 Cardamine hirsuta HOM05D003649 ORTHO05D004498 2.3e-148 529.6 468 61.8
AUR62036018 Chenopodium quinoa HOM05D003649 ORTHO05D004498 3.0e-148 529.3 461 63.8
arahy.Tifrunner.gnm1.ann1.2990BW Arachis hypogaea HOM05D003649 ORTHO05D004498 6.8e-148 528.1 461 62.3
AT1G31660 Arabidopsis thaliana HOM05D003649 ORTHO05D004498 2.0e-147 526.6 466 59.9
TAR627G1042 Trochodendron aralioides HOM05D003649 ORTHO05D004498 5.7e-147 525.0 378 72.8
Carub.0001s2998 Capsella rubella HOM05D003649 ORTHO05D004498 2.2e-146 523.1 468 60.9
THA.LOC104814384 Tarenaya hassleriana HOM05D003649 ORTHO05D004498 2.8e-146 522.7 465 62.6
Thhalv10007604m.g Eutrema salsugineum HOM05D003649 ORTHO05D004498 4.9e-146 521.9 469 59.9
Eucgr.F01411 Eucalyptus grandis HOM05D003649 ORTHO05D004498 1.8e-145 520.0 422 67.3
Nitab4.5_0001864g0020 Nicotiana tabacum HOM05D003649 ORTHO05D004498 4.1e-145 518.8 427 65.3
FvH4_3g16580 Fragaria vesca HOM05D003649 ORTHO05D004498 9.2e-145 517.7 486 59.7
Medtr5g025980 Medicago truncatula HOM05D003649 ORTHO05D004498 2.7e-144 516.2 467 61.0
Cpa.g.sc54.5 Carica papaya HOM05D003649 ORTHO05D004498 7.8e-144 514.6 487 59.3
Sp1g27340 Schrenkiella parvula HOM05D003649 ORTHO05D004498 3.8e-143 512.3 472 58.5
Sopen07g029910 Solanum pennellii HOM05D003649 ORTHO05D004498 8.6e-143 511.1 428 64.7
C07p14470 Brassica napus HOM05D003649 ORTHO05D004498 2.5e-142 509.6 468 58.8
Sed0023018 Sechium edule HOM05D003649 ORTHO05D004498 3.3e-142 509.2 462 61.3
Migut.J00669 Erythranthe guttata HOM05D003649 ORTHO05D004498 4.3e-142 508.8 463 63.3
RcHm_v2.0_Chr5g0027651 Rosa chinensis HOM05D003649 ORTHO05D004498 4.3e-142 508.8 453 61.6
Lj1C808T9 Lonicera japonica HOM05D003649 ORTHO05D004498 7.3e-142 508.1 384 72.9
FAN11G3158 Fragaria x ananassa HOM05D003649 ORTHO05D004498 2.1e-141 506.5 481 58.6
MBI17_g43195_MAGBIO Magnolia biondii HOM05D003649 ORTHO05D004498 2.1e-141 506.5 390 69.7
EL10Ac3g06580 Beta vulgaris HOM05D003649 ORTHO05D004498 3.6e-141 505.8 427 64.4
Haze_02513 Corylus avellana HOM05D003649 ORTHO05D004498 3.6e-141 505.8 510 58.4
BolC7t41946H Brassica oleracea HOM05D003649 ORTHO05D004498 1.0e-140 504.2 468 58.1
FAN21G1332 Fragaria x ananassa HOM05D003649 ORTHO05D004498 1.8e-140 503.4 484 58.1
ClCG09G009520 Citrullus lanatus HOM05D003649 ORTHO05D004498 2.3e-140 503.1 433 63.0
AUR62035508 Chenopodium quinoa HOM05D003649 ORTHO05D004498 3.0e-140 502.7 454 61.0
CDE06G0350 Ceratophyllum demersum HOM05D003649 ORTHO05D004498 6.8e-140 501.5 395 66.1
ATR1132G059 Amborella trichopoda HOM05D003649 ORTHO05D004498 4.4e-139 498.8 427 61.6
FAN25G2823 Fragaria x ananassa HOM05D003649 ORTHO05D004498 2.9e-138 496.1 439 61.5
MD05G1209000 Malus domestica HOM05D003649 ORTHO05D004498 2.9e-138 496.1 383 70.8
BcaB03g13795 Brassica carinata HOM05D003649 ORTHO05D004498 3.7e-138 495.7 437 61.1
Ciclev10023274m.g Citrus clementina HOM05D003649 ORTHO05D004498 6.4e-138 495.0 368 67.9
FAN21G3990 Fragaria x ananassa HOM05D003649 ORTHO05D004498 1.4e-137 493.8 442 61.1
FAN16G3269 Fragaria x ananassa HOM05D003649 ORTHO05D004498 9.2e-137 491.1 443 60.7
arahy.Tifrunner.gnm1.ann1.FP5V95 Arachis hypogaea HOM05D003649 ORTHO05D004498 5.9e-136 488.4 453 59.8
BraA07t28735Z Brassica rapa HOM05D003649 ORTHO05D004498 1.3e-135 487.3 438 59.6
A07p09400 Brassica napus HOM05D003649 ORTHO05D004498 2.3e-135 486.5 438 59.6
vmacro10597 Vaccinium macrocarpon HOM05D003649 ORTHO05D004498 5.0e-135 485.3 516 56.4
Solyc07g056550.3 Solanum lycopersicum HOM05D003649 ORTHO05D004498 1.1e-134 484.2 401 64.8
arahy.Tifrunner.gnm1.ann1.V43L5Z Arachis hypogaea HOM05D003649 ORTHO05D004498 7.3e-134 481.5 412 61.9
Haze_18856 Corylus avellana HOM05D003649 ORTHO05D004498 3.6e-133 479.2 491 57.0
Psat2g144640 Pisum sativum HOM05D003649 ORTHO05D004498 4.7e-133 478.8 404 63.1
VMungo1127G0750 Vigna mungo HOM05D003649 ORTHO05D004498 2.6e-131 473.0 376 68.6
A09p34660 Brassica napus HOM05D003649 ORTHO05D004498 1.1e-129 467.6 412 60.4
COL.COLO4_22663 Corchorus olitorius HOM05D003649 ORTHO05D004498 1.3e-127 460.7 485 55.9
Os09g0352400 Oryza sativa ssp. japonica HOM05D003649 ORTHO05D004498 1.3e-127 460.7 433 58.4
BraA09t39000Z Brassica rapa HOM05D003649 ORTHO05D004498 3.9e-127 459.1 412 59.2
arahy.Tifrunner.gnm1.ann1.956DWW Arachis hypogaea HOM05D003649 ORTHO05D004498 1.2e-125 454.1 402 60.2
BcaB07g32813 Brassica carinata HOM05D003649 ORTHO05D004498 1.2e-123 447.6 421 56.3
PSO339G1025 Papaver somniferum HOM05D003649 ORTHO05D004498 3.4e-123 446.0 460 55.4
PSO339G4670 Papaver somniferum HOM05D003649 ORTHO05D004498 2.2e-122 443.4 460 55.2
Thecc.09G275100 Theobroma cacao HOM05D003649 ORTHO05D004498 7.1e-121 438.3 321 70.7
Pp3c10_5710 Physcomitrium patens HOM05D003649 ORTHO05D004498 3.3e-118 429.5 471 50.7
Pp3c14_4070 Physcomitrium patens HOM05D003649 ORTHO05D004498 7.3e-118 428.3 455 52.1
HPP92_001514 Vanilla planifolia HOM05D003649 ORTHO05D004498 8.1e-117 424.9 380 61.6
BcaC05g27183 Brassica carinata HOM05D003649 ORTHO05D004498 6.8e-116 421.8 428 54.9
Gohir.A09G098001 Gossypium hirsutum HOM05D003649 ORTHO05D004498 1.2e-115 421.0 274 75.5
Zm00001eb065940 Zea mays HOM05D003649 ORTHO05D004498 9.9e-115 417.9 457 53.0
Aqoxy5G01320 Aquilegia oxysepala HOM05D003649 ORTHO05D004498 4.9e-114 415.6 333 65.5
Mapoly0048s0058 Marchantia polymorpha HOM05D003649 ORTHO05D004498 4.9e-114 415.6 453 51.2
CANSAT80G0167 Cannabis sativa HOM05D003649 ORTHO05D004498 1.4e-113 414.1 287 73.5
Ah.13g066610 Amaranthus hybridus HOM05D003649 ORTHO05D004498 7.8e-112 408.3 361 63.4
CBR_g984 Chara braunii HOM05D003649 ORTHO05D004498 2.3e-111 406.8 425 53.4
SMO358G0130 Selaginella moellendorffii HOM05D003649 ORTHO05D004498 3.9e-111 406.0 464 49.6
AagrBONN_evm.TU.Sc2ySwM_117.301 Anthoceros agrestis HOM05D003649 ORTHO05D004498 4.4e-107 392.5 339 58.4
BolC5t31810H Brassica oleracea HOM05D003649 ORTHO05D004498 1.3e-101 374.4 350 58.3
MCO03G098 Micromonas commoda HOM05D003649 ORTHO05D004498 1.6e-101 374.0 414 51.0
TPR.G9666 Trifolium pratense HOM05D003649 ORTHO05D004498 6.7e-95 352.1 305 62.6
PRCOL_00003636 Prasinoderma coloniale HOM05D003649 ORTHO05D004498 1.1e-94 351.3 344 53.2
A07p08470 Brassica napus HOM05D003649 ORTHO05D004498 1.9e-94 350.5 414 49.8
A07p11220 Brassica napus HOM05D003649 ORTHO05D004498 7.4e-94 348.6 414 49.8
Thhalv10028678m.g Eutrema salsugineum HOM05D003649 ORTHO05D004498 3.7e-93 346.3 455 45.9
BcaC06g35364 Brassica carinata HOM05D003649 ORTHO05D004498 1.8e-92 344.0 414 49.3
BraA07t28915Z Brassica rapa HOM05D003649 ORTHO05D004498 8.4e-90 335.1 414 49.0
Cre01.g063267 Chlamydomonas reinhardtii HOM05D003649 ORTHO05D004498 3.5e-88 329.7 348 50.0
Cfa011268 Carpinus fangiana HOM05D007039 ORTHO05D008886 6.7e-87 325.5 274 65.0
C07p13190 Brassica napus HOM05D003649 ORTHO05D004498 8.2e-85 318.5 366 49.5
C07p16930 Brassica napus HOM05D003649 ORTHO05D004498 8.2e-85 318.5 439 46.0
BolC7t41812H Brassica oleracea HOM05D003649 ORTHO05D004498 1.1e-84 318.2 366 49.5
CANSAT54G0397 Cannabis sativa HOM05D003649 ORTHO05D004498 3.5e-80 303.1 219 72.1
BcaC06g35591 Brassica carinata HOM05D003649 ORTHO05D004498 2.3e-79 300.4 353 48.7
BolC7t42199H Brassica oleracea HOM05D003649 ORTHO05D004498 2.3e-79 300.4 352 50.9
RcHm_v2.0_Chr6g0291881 Rosa chinensis HOM05D003649 ORTHO05D004498 1.1e-73 281.6 383 45.4
Atru.chr3.2268 Acer truncatum HOM05D003649 ORTHO05D004498 7.2e-65 252.3 462 39.4
Atru.chr3.2262 Acer truncatum HOM05D003649 ORTHO05D004498 1.8e-63 247.7 461 38.8
Cfa024010 Carpinus fangiana HOM05D003649 ORTHO05D004498 1.1e-54 218.4 467 34.7
Pp3c1_22730 Physcomitrium patens HOM05D003649 ORTHO05D004498 4.1e-52 209.9 153 68.6
SEGI_32462 Sequoiadendron giganteum HOM05D003649 ORTHO05D004498 1.6e-48 198.0 126 73.8
arahy.Tifrunner.gnm1.ann1.KE86EX Arachis hypogaea HOM05D003649 ORTHO05D004498 1.7e-45 188.0 200 51.0
Sabra16G0258400 Salix brachista HOM05D003649 ORTHO05D004498 3.8e-42 176.8 144 66.7
SEGI_37931 Sequoiadendron giganteum HOM05D003649 ORTHO05D004498 7.7e-35 152.5 94 76.6
arahy.Tifrunner.gnm1.ann1.S7QI7K Arachis hypogaea HOM05D003649 ORTHO05D004498 1.7e-34 151.4 166 50.6
AL6G50590 Arabidopsis lyrata HOM05D003649 ORTHO05D004498 1.2e-30 138.7 156 46.2
RhsimUnG0127900 Rhododendron simsii HOM05D003649 ORTHO05D004498 4.4e-30 136.7 100 72.0
Actinidia13653 Actinidia chinensis HOM05D003649 ORTHO05D004498 3.5e-27 127.1 133 54.1
DCAR_030783 Daucus carota HOM05D003649 ORTHO05D004498 7.8e-27 125.9 151 53.0
arahy.Tifrunner.gnm1.ann1.CT835L Arachis hypogaea HOM05D003649 ORTHO05D004498 6.6e-26 122.9 119 54.6
C07p16950 Brassica napus HOM05D003649 ORTHO05D027520 7.3e-25 119.4 209 40.7
BolC9t56391H Brassica oleracea HOM05D003649 ORTHO05D004498 7.3e-25 119.4 99 55.6
SGA_v2.0_scaffold30G12442 Striga asiatica HOM05D003649 ORTHO05D004498 5.2e-23 113.2 96 68.8
C09p35520 Brassica napus HOM05D003649 ORTHO05D004498 8.9e-23 112.5 94 56.4
A09p28020 Brassica napus HOM05D003649 ORTHO05D004498 2.0e-22 111.3 94 57.4
DCAR_030782 Daucus carota HOM05D003649 ORTHO05D004498 2.6e-22 110.9 68 85.3
BraA07t28632Z Brassica rapa HOM05D003649 ORTHO05D004498 3.4e-22 110.5 101 53.5
Thecc.09G274800 Theobroma cacao HOM05D003649 ORTHO05D004498 3.5e-19 100.5 83 63.9
BcaC05g27926 Brassica carinata HOM05D003649 ORTHO05D004498 8.0e-16 89.4 166 36.1
BolC7t42200H Brassica oleracea HOM05D003649 ORTHO05D027520 3.4e-14 84.0 202 32.7
SGA_v2.0_scaffold24G10283 Striga asiatica HOM05D003649 ORTHO05D031702 1.3e-13 82.0 49 79.6
BolC7t42195H Brassica oleracea HOM05D003649 ORTHO05D040526 3.7e-13 80.5 97 46.4
C07p16940 Brassica napus HOM05D003649 ORTHO05D027520 3.5e-11 73.9 202 31.2
SEGI_11889 Sequoiadendron giganteum HOM05D003649 ORTHO05D004498 4.6e-11 73.6 127 42.5
BcaC04g21367 Brassica carinata HOM05D001554 ORTHO05D001481 2.3e-10 71.2 54 53.7
C09p32650 Brassica napus HOM05D003649 ORTHO05D004498 2.3e-10 71.2 54 53.7
Atru.chr3.2263 Acer truncatum HOM05D003649 ORTHO05D004498 2.1e-08 64.7 82 53.7
Atru.chr3.2269 Acer truncatum HOM05D003649 ORTHO05D004498 2.8e-08 64.3 82 53.7
MBI19_g34544_MAGBIO Magnolia biondii HOM05D000961 ORTHO05D000841 3.6e-08 63.9 39 76.9
C07p16900 Brassica napus HOM05D003649 ORTHO05D040526 8.1e-08 62.8 84 44.0
C09p35530 Brassica napus HOM05D003649 ORTHO05D004498 1.1e-07 62.4 182 32.4
SHI14588 Sapria himalayana HOM05D003649 ORTHO05D004498 7.5e-06 56.2 46 60.9


User provided reference genes

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