Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu058429.1 Olea europaea HOM05D031317 ORTHO05D022512 2.0e-96 355.9 203 100.0
Oeu001298.2 Olea europaea HOM05D001419 ORTHO05D001376 7.3e-46 188.0 252 50.0
Cc02_g32270 Coffea canephora HOM05D001419 ORTHO05D001376 1.1e-33 147.5 222 46.4
SalBow8G5217 Salvia bowleyana HOM05D001419 ORTHO05D001376 2.7e-24 116.3 277 41.9
SalBow8G0433 Salvia bowleyana HOM05D001419 ORTHO05D001376 3.5e-24 115.9 278 41.7
Migut.M00653 Erythranthe guttata HOM05D001419 ORTHO05D001376 6.7e-23 111.7 256 38.7
Peaxi162Scf00410g00019 Petunia axillaris HOM05D001419 ORTHO05D001376 6.3e-21 105.1 262 35.9
Sopen10g011780 Solanum pennellii HOM05D001419 ORTHO05D001376 2.6e-19 99.8 226 42.0
Solyc10g037940.1 Solanum lycopersicum HOM05D001419 ORTHO05D022512 3.4e-19 99.4 226 38.1
PGSC0003DMG400026371 Solanum tuberosum HOM05D001419 ORTHO05D022512 1.3e-18 97.4 250 35.6
unitig_62.g23085 Utricularia gibba HOM05D001419 ORTHO05D001376 1.2e-16 90.9 245 39.2
Rhsim07G0176600 Rhododendron simsii HOM05D001419 ORTHO05D001376 1.5e-14 84.0 210 36.7
Cfa006501 Carpinus fangiana HOM05D001419 ORTHO05D001376 1.3e-13 80.9 85 55.3
Nitab4.5_0003439g0020 Nicotiana tabacum HOM05D001419 ORTHO05D001376 2.2e-13 80.1 282 34.0
Haze_04287 Corylus avellana HOM05D001419 ORTHO05D001376 1.1e-12 77.8 79 54.4
Nn3g21279 Nelumbo nucifera HOM05D001419 ORTHO05D001376 2.4e-12 76.6 89 55.1
Dinv27608 Davidia involucrata HOM05D001419 ORTHO05D001376 4.1e-12 75.9 230 33.0
Prupe.6G335100 Prunus persica HOM05D001419 ORTHO05D001376 6.9e-12 75.1 88 56.8
CSS0002764 Camellia sinensis var. sinensis HOM05D001419 ORTHO05D001376 9.1e-12 74.7 152 42.8
CANSAT54G1295 Cannabis sativa HOM05D001419 ORTHO05D001376 2.6e-11 73.2 198 34.8
Eucgr.H04424 Eucalyptus grandis HOM05D001419 ORTHO05D001376 2.6e-11 73.2 124 46.0
Ca_09389_v3 Cicer arietinum L. HOM05D001419 ORTHO05D001376 1.7e-10 70.5 251 35.1
QL03p000945 Quercus lobata HOM05D001419 ORTHO05D001376 5.0e-10 68.9 80 52.5
TAR633G1372 Trochodendron aralioides HOM05D001419 ORTHO05D001376 5.0e-10 68.9 86 50.0
PSO541G2430 Papaver somniferum HOM05D001419 ORTHO05D001376 1.4e-09 67.4 198 34.3
Medtr7g114220 Medicago truncatula HOM05D001419 ORTHO05D001376 1.9e-09 67.0 231 37.7
Psat3g009000 Pisum sativum HOM05D001419 ORTHO05D001376 4.2e-09 65.9 251 33.5
Actinidia30906 Actinidia chinensis HOM05D001419 ORTHO05D001376 9.4e-09 64.7 70 57.1
Lj9A675T37 Lonicera japonica HOM05D001419 ORTHO05D001376 9.4e-09 64.7 163 37.4
PGR004G1853 Punica granatum HOM05D001419 ORTHO05D001376 9.4e-09 64.7 206 34.0
EL10Ac4g09245 Beta vulgaris HOM05D001419 ORTHO05D000001 1.6e-08 63.9 172 39.0
Duzib177G0060 Durio zibethinus HOM05D031317 ORTHO05D022512 2.1e-08 63.5 183 37.2
Sed0016461 Sechium edule HOM05D001419 ORTHO05D001376 2.7e-08 63.2 197 40.6
Duzib177G0918 Durio zibethinus HOM05D031317 ORTHO05D022512 6.1e-08 62.0 183 36.6
Duzib246G0007 Durio zibethinus HOM05D031317 ORTHO05D022512 6.1e-08 62.0 183 36.6
PSO675G4352 Papaver somniferum HOM05D001419 ORTHO05D001376 1.8e-07 60.5 207 33.8
ClCG02G016250 Citrullus lanatus HOM05D001419 ORTHO05D001376 3.0e-07 59.7 90 53.3
MELO3C004339.2 Cucumis melo HOM05D001419 ORTHO05D001376 3.0e-07 59.7 93 51.6
Cpa.g.sc117.14 Carica papaya HOM05D001419 ORTHO05D001376 1.1e-06 57.8 61 55.7
DCAR_003296 Daucus carota HOM05D001419 ORTHO05D001376 2.0e-06 57.0 264 26.9
RcHm_v2.0_Chr3g0452891 Rosa chinensis HOM05D001419 ORTHO05D001376 2.6e-06 56.6 252 36.5
VMungo0540G0088 Vigna mungo HOM05D001419 ORTHO05D001376 4.4e-06 55.8 243 32.5
Hma1.2p1_0168F.1_g074060 Hydrangea macrophylla HOM05D001419 ORTHO05D001376 5.7e-06 55.5 105 41.9
MD12G1231500 Malus domestica HOM05D001419 ORTHO05D001376 5.7e-06 55.5 239 30.1


User provided reference genes

Program Settings