Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu058353.1 Olea europaea HOM05D001750 ORTHO05D001825 2.0e-49 198.7 98 100.0
Oeu016296.1 Olea europaea HOM05D001750 ORTHO05D001825 5.9e-25 117.5 73 83.6
Lj2P1238T72 Lonicera japonica HOM05D001750 ORTHO05D001825 1.0e-24 116.7 92 68.5
Oeu012766.1 Olea europaea HOM05D001750 ORTHO05D001825 1.3e-24 116.3 73 84.9
Potri.001G342933 Populus trichocarpa HOM05D001750 ORTHO05D001825 1.3e-24 116.3 92 67.4
ATCG01010 Arabidopsis thaliana HOM05D001750 ORTHO05D001825 2.2e-24 115.5 92 67.4
BolSC37t60789H Brassica oleracea HOM05D001750 ORTHO05D001825 2.9e-24 115.2 92 67.4
BolSC44t60818H Brassica oleracea HOM05D001750 ORTHO05D001825 2.9e-24 115.2 92 67.4
BolSC45t60914H Brassica oleracea HOM05D001750 ORTHO05D001825 2.9e-24 115.2 92 67.4
BraSC103t45424Z Brassica rapa HOM05D001750 ORTHO05D001825 2.9e-24 115.2 92 67.4
BraSC143t45665Z Brassica rapa HOM05D001750 ORTHO05D001825 2.9e-24 115.2 92 67.4
BraSC25t45905Z Brassica rapa HOM05D001750 ORTHO05D001825 2.9e-24 115.2 92 67.4
BraSC59t46546Z Brassica rapa HOM05D001750 ORTHO05D001825 2.9e-24 115.2 92 67.4
CAN.G134.7 Capsicum annuum HOM05D001750 ORTHO05D001825 2.9e-24 115.2 92 67.4
CAN.G1431.3 Capsicum annuum HOM05D001750 ORTHO05D001825 2.9e-24 115.2 92 67.4
CAN.G1526.5 Capsicum annuum HOM05D001750 ORTHO05D001825 2.9e-24 115.2 92 67.4
CAN.G413.7 Capsicum annuum HOM05D001750 ORTHO05D001825 2.9e-24 115.2 92 67.4
DCAR_032533 Daucus carota HOM05D001750 ORTHO05D001825 2.9e-24 115.2 92 67.4
Solyc00g500195.1 Solanum lycopersicum HOM05D001750 ORTHO05D001825 2.9e-24 115.2 92 67.4
PGSC0003DMG400029008 Solanum tuberosum HOM05D001750 ORTHO05D001825 2.9e-24 115.2 92 67.4
AL7G50360 Arabidopsis lyrata HOM05D001750 ORTHO05D001825 3.8e-24 114.8 92 66.3
HanXRQChr02g0059681 Helianthus annuus HOM05D001750 ORTHO05D001825 6.5e-24 114.0 92 67.4
HanXRQChr05g0152401 Helianthus annuus HOM05D001750 ORTHO05D001825 6.5e-24 114.0 92 67.4
HanXRQCPg0580391 Helianthus annuus HOM05D001750 ORTHO05D001825 6.5e-24 114.0 92 67.4
Sed0000095 Sechium edule HOM05D001750 ORTHO05D001825 8.5e-24 113.6 92 66.3
GSVIVG01004971001 Vitis vinifera HOM05D001750 ORTHO05D001825 8.5e-24 113.6 73 79.5
FvH4_c3g00021 Fragaria vesca HOM05D001750 ORTHO05D001825 1.1e-23 113.2 92 66.3
unitig_736.g22737 Utricularia gibba HOM05D001750 ORTHO05D001825 1.1e-23 113.2 92 66.3
EL10As28g24255 Beta vulgaris HOM05D001750 ORTHO05D001825 1.9e-23 112.5 92 65.2
HanXRQChr17g0557801 Helianthus annuus HOM05D001750 ORTHO05D001825 1.9e-23 112.5 92 66.3
Ciclev10013979m.g Citrus clementina HOM05D001750 ORTHO05D001825 2.5e-23 112.1 92 65.2
Ciclev10013982m.g Citrus clementina HOM05D001750 ORTHO05D001825 2.5e-23 112.1 92 65.2
Ciclev10013998m.g Citrus clementina HOM05D001750 ORTHO05D001825 2.5e-23 112.1 92 65.2
Ciclev10014001m.g Citrus clementina HOM05D001750 ORTHO05D001825 2.5e-23 112.1 92 65.2
Ciclev10018421m.g Citrus clementina HOM05D001750 ORTHO05D001825 2.5e-23 112.1 92 65.2
Ciclev10030453m.g Citrus clementina HOM05D001750 ORTHO05D001825 2.5e-23 112.1 92 65.2
Nn064s42216 Nelumbo nucifera HOM05D001750 ORTHO05D001825 2.5e-23 112.1 92 65.2
Nn212s45208 Nelumbo nucifera HOM05D001750 ORTHO05D001825 2.5e-23 112.1 92 65.2
PGR111G0046 Punica granatum HOM05D001750 ORTHO05D001825 2.5e-23 112.1 92 65.2
LjContig00318g0010147 Lotus japonicus HOM05D001750 ORTHO05D001825 3.2e-23 111.7 92 65.2
LjContig00319g0009462 Lotus japonicus HOM05D001750 ORTHO05D001825 3.2e-23 111.7 92 65.2
Medtr4g051300 Medicago truncatula HOM05D001750 ORTHO05D001825 3.2e-23 111.7 92 64.1
Medtr7g021740 Medicago truncatula HOM05D001750 ORTHO05D001825 3.2e-23 111.7 92 64.1
Psat0ss8367g0120 Pisum sativum HOM05D001750 ORTHO05D001825 3.2e-23 111.7 92 64.1
HanXRQChr06g0182971 Helianthus annuus HOM05D001750 ORTHO05D001825 5.5e-23 110.9 92 66.3
PSO548G0117 Papaver somniferum HOM05D001750 ORTHO05D001825 5.5e-23 110.9 92 64.1
Ciclev10013988m.g Citrus clementina HOM05D001750 ORTHO05D001825 7.2e-23 110.5 92 64.1
CAN.G1045.16 Capsicum annuum HOM05D001750 ORTHO05D001825 9.4e-23 110.2 92 65.2
Lalb_Chr03g0039401 Lupinus albus HOM05D001750 ORTHO05D001825 9.4e-23 110.2 92 63.0
HanXRQChr08g0212841 Helianthus annuus HOM05D001750 ORTHO05D001825 1.6e-22 109.4 92 65.2
Gohir.1Z049402 Gossypium hirsutum HOM05D001750 ORTHO05D001825 4.7e-22 107.8 92 62.0
Medtr0002s0200 Medicago truncatula HOM05D001750 ORTHO05D001825 6.1e-22 107.5 92 63.0
Psat5g142840 Pisum sativum HOM05D001750 ORTHO05D001825 8.0e-22 107.1 92 63.0
Gohir.A02G134105 Gossypium hirsutum HOM05D001750 ORTHO05D001825 1.4e-21 106.3 92 60.9
Gohir.A04G039195 Gossypium hirsutum HOM05D001750 ORTHO05D001825 1.4e-21 106.3 92 60.9
Gohir.A12G229700 Gossypium hirsutum HOM05D001750 ORTHO05D001825 1.4e-21 106.3 92 60.9
arahy.Tifrunner.gnm1.ann1.5P7K6N Arachis hypogaea HOM05D001750 ORTHO05D001825 3.0e-21 105.1 92 62.0
arahy.Tifrunner.gnm1.ann1.B6WU7N Arachis hypogaea HOM05D001750 ORTHO05D001825 3.0e-21 105.1 92 62.0
Gohir.1Z049581 Gossypium hirsutum HOM05D001750 ORTHO05D001825 3.0e-21 105.1 92 59.8
Nn031s41610 Nelumbo nucifera HOM05D001750 ORTHO05D001825 6.7e-21 104.0 92 62.0
Gohir.A07G167090 Gossypium hirsutum HOM05D001750 ORTHO05D001825 1.1e-20 103.2 92 59.8
EL10Ac1g00371 Beta vulgaris HOM05D001750 ORTHO05D001825 2.0e-20 102.4 85 63.5
SEGI_32159 Sequoiadendron giganteum HOM05D001750 ORTHO05D001825 2.0e-20 102.4 92 60.9
SEGI_32489 Sequoiadendron giganteum HOM05D001750 ORTHO05D001825 2.0e-20 102.4 92 60.9
SEGI_35420 Sequoiadendron giganteum HOM05D001750 ORTHO05D001825 2.0e-20 102.4 92 60.9
Gohir.D09G044501 Gossypium hirsutum HOM05D001750 ORTHO05D001825 3.7e-19 98.2 92 58.7
Gorai.006G066100 Gossypium raimondii HOM05D001750 ORTHO05D001825 6.3e-19 97.4 92 59.8
Glyma.11G081100 Glycine max HOM05D001750 ORTHO05D001825 1.1e-18 96.7 92 57.6
Lsat_1_v5_gn_5_52761 Lactuca sativa HOM05D001750 ORTHO05D001825 1.1e-18 96.7 100 57.0
BolSC43t60806H Brassica oleracea HOM05D001750 ORTHO05D001825 3.5e-17 91.7 87 62.1
HanXRQChr01g0020101 Helianthus annuus HOM05D001750 ORTHO05D001825 5.9e-17 90.9 77 66.2
HanXRQChr09g0258551 Helianthus annuus HOM05D001750 ORTHO05D001825 5.9e-17 90.9 77 66.2
Gorai.010G151000 Gossypium raimondii HOM05D001750 ORTHO05D001825 1.3e-16 89.7 87 55.2
Solyc02g011710.1 Solanum lycopersicum HOM05D001750 ORTHO05D001825 1.1e-15 86.7 91 52.7
SEGI_16404 Sequoiadendron giganteum HOM05D001387 ORTHO05D001250 1.6e-14 82.8 82 58.5
EL10As15g24136 Beta vulgaris HOM05D001750 ORTHO05D001825 3.6e-14 81.6 73 57.5
BolC9t56810H Brassica oleracea HOM05D001750 ORTHO05D001825 6.1e-14 80.9 73 57.5
BolSC49t61137H Brassica oleracea HOM05D001750 ORTHO05D001825 6.1e-14 80.9 73 57.5
Lalb_Chr16g0388571 Lupinus albus HOM05D001750 ORTHO05D001825 8.8e-13 77.0 73 53.4
BolSC46t60963H Brassica oleracea HOM05D001750 ORTHO05D001825 4.4e-12 74.7 86 57.0
Oeu058634.1 Olea europaea HOM05D001750 ORTHO05D001825 5.7e-12 74.3 67 62.7
SalBow1G5472 Salvia bowleyana HOM05D001750 ORTHO05D001825 5.7e-12 74.3 65 64.6
Psat0s6638g0080 Pisum sativum HOM05D001750 ORTHO05D001825 7.5e-12 73.9 71 59.2
Psat0s8829g0080 Pisum sativum HOM05D001750 ORTHO05D001825 7.5e-12 73.9 71 59.2
Psat4g065280 Pisum sativum HOM05D001750 ORTHO05D001825 7.5e-12 73.9 71 59.2
Solyc11g044645.1 Solanum lycopersicum HOM05D001750 ORTHO05D001825 2.2e-11 72.4 73 53.4
PGSC0003DMG400010958 Solanum tuberosum HOM05D001750 ORTHO05D001825 2.2e-11 72.4 42 78.6
Manes.18G138200 Manihot esculenta HOM05D001750 ORTHO05D001825 3.7e-11 71.6 43 74.4
HanXRQChr00c0289g0573101 Helianthus annuus HOM05D001750 ORTHO05D001825 4.8e-11 71.2 73 54.8
Nn1g09725 Nelumbo nucifera HOM05D001750 ORTHO05D001825 1.4e-10 69.7 65 60.0
Nitab4.5_0007400g0130 Nicotiana tabacum HOM05D001750 ORTHO05D001825 2.4e-10 68.9 73 52.1
Oeu010691.1 Olea europaea HOM05D001750 ORTHO05D001825 3.1e-10 68.6 98 45.9
Solyc01g017100.2 Solanum lycopersicum HOM05D001750 ORTHO05D001825 1.0e-08 63.5 63 58.7
BraSC138t45539Z Brassica rapa HOM05D001750 ORTHO05D001825 1.7e-08 62.8 61 60.7
SEGI_05928 Sequoiadendron giganteum HOM05D001750 ORTHO05D001825 2.2e-08 62.4 64 57.8
Mapoly0092s0002 Marchantia polymorpha HOM05D001750 ORTHO05D001825 1.1e-07 60.1 79 44.3
SHI48909 Sapria himalayana HOM05D001750 ORTHO05D001825 1.1e-07 60.1 85 38.8
ATMG00513 Arabidopsis thaliana HOM05D001750 ORTHO05D001825 2.5e-07 58.9 85 38.8
BolSC28t60406H Brassica oleracea HOM05D001750 ORTHO05D001825 2.5e-07 58.9 85 38.8
BolSC28t60420H Brassica oleracea HOM05D001750 ORTHO05D001825 2.5e-07 58.9 85 38.8
BraSC77t46633Z Brassica rapa HOM05D001750 ORTHO05D001825 2.5e-07 58.9 85 38.8
Sp3g25940 Schrenkiella parvula HOM05D001750 ORTHO05D001825 2.5e-07 58.9 85 38.8
TPR.G33669 Trifolium pratense HOM05D001750 ORTHO05D001825 2.5e-07 58.9 60 56.7
Zm00001eb384430 Zea mays HOM05D001750 ORTHO05D001825 2.5e-07 58.9 85 38.8
Zm00001eb384490 Zea mays HOM05D001750 ORTHO05D001825 2.5e-07 58.9 85 38.8
Zm00001eb437920 Zea mays HOM05D001750 ORTHO05D001825 2.5e-07 58.9 85 38.8
Zm00001eb438010 Zea mays HOM05D001750 ORTHO05D001825 2.5e-07 58.9 85 38.8
Zm00001eb439010 Zea mays HOM05D001750 ORTHO05D001825 2.5e-07 58.9 85 38.8
Zm00001eb440820 Zea mays HOM05D001750 ORTHO05D001825 2.5e-07 58.9 85 38.8
Zm00001eb442540 Zea mays HOM05D001750 ORTHO05D001825 2.5e-07 58.9 85 38.8
CAN.G134.25 Capsicum annuum HOM05D001750 ORTHO05D001825 3.2e-07 58.5 85 38.8
Glyma.15G187600 Glycine max HOM05D001750 ORTHO05D001825 3.2e-07 58.5 85 38.8
Glyma.15G187800 Glycine max HOM05D001750 ORTHO05D001825 3.2e-07 58.5 85 38.8
Ah.10g027940 Amaranthus hybridus HOM05D001750 ORTHO05D001825 4.2e-07 58.2 85 38.8
Ah.10g028650 Amaranthus hybridus HOM05D001750 ORTHO05D001825 4.2e-07 58.2 85 38.8
arahy.Tifrunner.gnm1.ann1.BE3YYP Arachis hypogaea HOM05D001750 ORTHO05D001825 4.2e-07 58.2 85 38.8
Cfa005537 Carpinus fangiana HOM05D001750 ORTHO05D001825 4.2e-07 58.2 85 38.8
Cfa022996 Carpinus fangiana HOM05D001750 ORTHO05D001825 4.2e-07 58.2 85 38.8
AUR62042331 Chenopodium quinoa HOM05D001750 ORTHO05D001825 4.2e-07 58.2 85 38.8
Ca_22167_v3 Cicer arietinum L. HOM05D001750 ORTHO05D001825 4.2e-07 58.2 85 38.8
Ca_22168_v3 Cicer arietinum L. HOM05D001750 ORTHO05D001825 4.2e-07 58.2 85 38.8
Dinv06672 Davidia involucrata HOM05D001750 ORTHO05D001825 4.2e-07 58.2 85 38.8
ECA039G0010 Erigeron canadensis HOM05D001750 ORTHO05D001825 4.2e-07 58.2 85 38.8
FvH4_c1g00470 Fragaria vesca HOM05D001750 ORTHO05D001825 4.2e-07 58.2 85 38.8
FAN14G4205 Fragaria x ananassa HOM05D001750 ORTHO05D001825 4.2e-07 58.2 85 38.8
Gorai.001G163400 Gossypium raimondii HOM05D001750 ORTHO05D001825 4.2e-07 58.2 85 38.8
Hma1.2p1_0034F.1_g021420 Hydrangea macrophylla HOM05D001750 ORTHO05D001825 4.2e-07 58.2 85 38.8
LjContig00315g0010666 Lotus japonicus HOM05D001750 ORTHO05D001825 4.2e-07 58.2 85 38.8
Lalb_Chr17g0337371 Lupinus albus HOM05D001750 ORTHO05D001825 4.2e-07 58.2 85 38.8
Phvul.005G088400 Phaseolus vulgaris HOM05D001750 ORTHO05D001825 4.2e-07 58.2 85 38.8
RhsimMtG0004100 Rhododendron simsii HOM05D001750 ORTHO05D001825 4.2e-07 58.2 85 38.8
RcHm_v2.0_MTg0498221 Rosa chinensis HOM05D001750 ORTHO05D001825 4.2e-07 58.2 85 38.8
SabraMtG0002600 Salix brachista HOM05D001750 ORTHO05D001825 4.2e-07 58.2 85 38.8
SalBow1G5977 Salvia bowleyana HOM05D001750 ORTHO05D001825 4.2e-07 58.2 85 38.8
Sed0023702 Sechium edule HOM05D001750 ORTHO05D001825 4.2e-07 58.2 85 38.8
Hund27692 Selenicereus undatus HOM05D001750 ORTHO05D001825 4.2e-07 58.2 85 38.8
Hund29041 Selenicereus undatus HOM05D001750 ORTHO05D001825 4.2e-07 58.2 85 38.8
Hund29121 Selenicereus undatus HOM05D001750 ORTHO05D001825 4.2e-07 58.2 85 38.8
Hund31001 Selenicereus undatus HOM05D001750 ORTHO05D001825 4.2e-07 58.2 85 38.8
Solyc00g500098.1 Solanum lycopersicum HOM05D001750 ORTHO05D001825 4.2e-07 58.2 85 38.8
Solyc00g500169.1 Solanum lycopersicum HOM05D001750 ORTHO05D001825 4.2e-07 58.2 85 38.8
Solyc00g500271.1 Solanum lycopersicum HOM05D001750 ORTHO05D001825 4.2e-07 58.2 85 38.8
Solyc00g500317.1 Solanum lycopersicum HOM05D001750 ORTHO05D001825 4.2e-07 58.2 85 38.8
SGA_v2.0_scaffold245G44452 Striga asiatica HOM05D001750 ORTHO05D001825 4.2e-07 58.2 85 38.8
TPR.G28320 Trifolium pratense HOM05D001750 ORTHO05D001825 4.2e-07 58.2 85 38.8
VMungo0329G0001 Vigna mungo HOM05D001750 ORTHO05D001825 4.2e-07 58.2 85 38.8
Hma1.2p1_1529F.1_g289140 Hydrangea macrophylla HOM05D001750 ORTHO05D001825 5.5e-07 57.8 85 38.8
PSO017G5352 Papaver somniferum HOM05D001750 ORTHO05D001825 5.5e-07 57.8 85 36.5
Cpa.g.sc900.3 Carica papaya HOM05D001750 ORTHO05D001825 7.2e-07 57.4 85 38.8
Haze_27121 Corylus avellana HOM05D001750 ORTHO05D001825 7.2e-07 57.4 83 38.6
SHI35585 Sapria himalayana HOM05D001750 ORTHO05D001825 7.2e-07 57.4 85 37.6
Sed0003522 Sechium edule HOM05D000963 ORTHO05D004715 7.2e-07 57.4 54 61.1
SMO086G0048 Selaginella moellendorffii HOM05D001750 ORTHO05D001825 7.2e-07 57.4 92 43.5
unitig_87.g28030 Utricularia gibba HOM05D001750 ORTHO05D001825 7.2e-07 57.4 85 38.8
HanXRQChr11g0323711 Helianthus annuus HOM05D001750 ORTHO05D001825 1.2e-06 56.6 50 70.0
ECA234G2654 Erigeron canadensis HOM05D001750 ORTHO05D001825 1.6e-06 56.2 85 37.6
TAR022G0005 Trochodendron aralioides HOM05D001750 ORTHO05D001825 1.6e-06 56.2 84 36.9
CAN.G1159.8 Capsicum annuum HOM05D001750 ORTHO05D001825 2.1e-06 55.8 85 37.6
HanXRQMTg0579361 Helianthus annuus HOM05D001750 ORTHO05D001825 2.7e-06 55.5 85 37.6
Lj2C1233T24 Lonicera japonica HOM05D001750 ORTHO05D001825 2.7e-06 55.5 85 37.6
Nn117s43413 Nelumbo nucifera HOM05D001750 ORTHO05D001825 2.7e-06 55.5 85 37.6
Nn117s43418 Nelumbo nucifera HOM05D001750 ORTHO05D001825 2.7e-06 55.5 85 37.6
Nn1g10108 Nelumbo nucifera HOM05D001750 ORTHO05D001825 2.7e-06 55.5 85 37.6
Nn1g10189 Nelumbo nucifera HOM05D001750 ORTHO05D001825 2.7e-06 55.5 85 37.6
Nn1g10194 Nelumbo nucifera HOM05D001750 ORTHO05D001825 2.7e-06 55.5 85 37.6
unitig_91.g26524 Utricularia gibba HOM05D001750 ORTHO05D001825 2.7e-06 55.5 56 58.9
Dinv18904 Davidia involucrata HOM05D001750 ORTHO05D001825 3.6e-06 55.1 85 37.6
SMO053G0013 Selaginella moellendorffii HOM05D001750 ORTHO05D001825 3.6e-06 55.1 85 37.6
CDE02G3422 Ceratophyllum demersum HOM05D001750 ORTHO05D001825 4.7e-06 54.7 85 37.6
FAN14G0206 Fragaria x ananassa HOM05D001750 ORTHO05D001825 4.7e-06 54.7 85 36.5
Solyc11g021190.2 Solanum lycopersicum HOM05D001750 ORTHO05D001825 6.1e-06 54.3 57 57.9
Solyc12g033070.1 Solanum lycopersicum HOM05D001750 ORTHO05D001825 6.1e-06 54.3 42 61.9
Actinidia34923 Actinidia chinensis HOM05D001750 ORTHO05D001825 8.0e-06 53.9 99 36.4
MBI05_g05342_MAGBIO Magnolia biondii HOM05D001750 ORTHO05D001825 8.0e-06 53.9 85 37.6
MBI06_g25391_MAGBIO Magnolia biondii HOM05D001750 ORTHO05D001825 8.0e-06 53.9 85 37.6


User provided reference genes

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