Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu058351.1 Olea europaea HOM05D004182 ORTHO05D034028 8.8e-87 323.6 160 100.0
BolSC46t60966H Brassica oleracea HOM05D004182 ORTHO05D007321 3.8e-29 132.1 139 56.8
FAN26G2239 Fragaria x ananassa HOM05D004182 ORTHO05D010449 4.9e-29 131.7 127 59.8
Sopen02g009080 Solanum pennellii HOM05D004182 ORTHO05D007321 1.9e-28 129.8 113 64.6
BolSC29t60554H Brassica oleracea HOM05D004182 ORTHO05D007321 4.2e-28 128.6 120 61.7
BolSC35t60712H Brassica oleracea HOM05D004182 ORTHO05D007321 4.2e-28 128.6 120 61.7
BcaNung07085 Brassica carinata HOM05D001966 ORTHO05D010449 9.6e-25 117.5 110 61.8
VMungo0942G0003 Vigna mungo HOM05D004182 ORTHO05D007321 1.3e-24 117.1 111 62.2
ClCG02G009760 Citrullus lanatus HOM05D001966 ORTHO05D000002 1.1e-23 114.0 153 47.1
Sc04g0003140 Simmondsia chinensis HOM05D004182 ORTHO05D010127 2.0e-22 109.8 107 58.9
Cpa.g.sc37.79 Carica papaya HOM05D004182 ORTHO05D010127 9.3e-20 100.9 67 80.6
FAN13G1592 Fragaria x ananassa HOM05D001966 ORTHO05D010127 1.9e-17 93.2 67 76.1
Oeu008622.1 Olea europaea HOM05D000866 ORTHO05D000673 3.3e-17 92.4 68 70.6
Nitab4.5_0012517g0030 Nicotiana tabacum HOM05D004182 ORTHO05D010127 7.4e-17 91.3 66 72.7
Oeu039800.1 Olea europaea HOM05D056519 ORTHO05D034028 2.1e-16 89.7 51 82.4
VMungo0647G1304 Vigna mungo HOM05D004182 ORTHO05D010127 2.4e-15 86.3 113 48.7
Lsat_1_v5_gn_6_14541 Lactuca sativa HOM05D001966 ORTHO05D010127 3.1e-15 85.9 67 71.6
Oeu022559.1 Olea europaea HOM05D001966 ORTHO05D011119 1.2e-14 84.0 112 44.6
arahy.Tifrunner.gnm1.ann1.MHEL4J Arachis hypogaea HOM05D001966 ORTHO05D011119 4.5e-14 82.0 64 67.2
Solyc00g500196.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 5.5e-12 75.1 50 78.0
Atru.chr1.3577 Acer truncatum HOM05D000680 ORTHO05D000738 6.1e-11 71.6 66 65.2
arahy.Tifrunner.gnm1.ann1.QSVN22 Arachis hypogaea HOM05D004182 ORTHO05D010127 7.9e-11 71.2 48 81.2
Nitab4.5_0007400g0080 Nicotiana tabacum HOM05D001966 ORTHO05D010127 1.3e-10 70.5 59 61.0
BolC9t56917H Brassica oleracea HOM05D004182 ORTHO05D010127 1.8e-10 70.1 62 67.7
C09p24670 Brassica napus HOM05D001966 ORTHO05D007227 3.0e-10 69.3 136 39.7
arahy.Tifrunner.gnm1.ann1.CV40CV Arachis hypogaea HOM05D001966 ORTHO05D010127 1.1e-09 67.4 52 69.2
Nitab4.5_0003644g0040 Nicotiana tabacum HOM05D001966 ORTHO05D010127 1.5e-09 67.0 47 72.3
ClCG02G011190 Citrullus lanatus HOM05D000540 ORTHO05D000681 1.9e-09 66.6 44 75.0
Peaxi162Scf00263g00168 Petunia axillaris HOM05D001966 ORTHO05D010127 1.3e-08 63.9 42 73.8
CARHR044300 Cardamine hirsuta HOM05D004182 ORTHO05D010127 1.6e-08 63.5 39 84.6
BolSC29t60540H Brassica oleracea HOM05D004182 ORTHO05D007321 2.8e-08 62.8 137 38.7
BolSC35t60684H Brassica oleracea HOM05D004182 ORTHO05D007321 2.8e-08 62.8 137 38.7
BolSC44t60830H Brassica oleracea HOM05D004182 ORTHO05D007321 2.8e-08 62.8 137 38.7
BolSC45t60917H Brassica oleracea HOM05D004182 ORTHO05D007321 2.8e-08 62.8 137 38.7
BolSC49t61134H Brassica oleracea HOM05D004182 ORTHO05D007321 2.8e-08 62.8 137 38.7
BraSC103t45421Z Brassica rapa HOM05D004182 ORTHO05D007321 2.8e-08 62.8 137 38.7
BraSC138t45528Z Brassica rapa HOM05D004182 ORTHO05D007321 2.8e-08 62.8 137 38.7
BraSC25t45918Z Brassica rapa HOM05D004182 ORTHO05D007321 2.8e-08 62.8 137 38.7
BraSC59t46534Z Brassica rapa HOM05D004182 ORTHO05D007321 2.8e-08 62.8 137 38.7
Gohir.D13G086950 Gossypium hirsutum HOM05D004182 ORTHO05D010127 4.8e-08 62.0 42 81.0
BraSC143t45651Z Brassica rapa HOM05D004182 ORTHO05D007321 8.2e-08 61.2 57 54.4
Nitab4.5_0001577g0040 Nicotiana tabacum HOM05D001966 ORTHO05D010127 8.2e-08 61.2 53 58.5
ECA247G0757 Erigeron canadensis HOM05D000006 ORTHO05D000001 5.3e-07 58.5 47 61.7
Peaxi162Scf01071g00036 Petunia axillaris HOM05D001966 ORTHO05D010127 5.3e-07 58.5 42 69.0
SEGI_31611 Sequoiadendron giganteum HOM05D001966 ORTHO05D011119 5.3e-07 58.5 34 82.4
Medtr2g006030 Medicago truncatula HOM05D001966 ORTHO05D021579 9.0e-07 57.8 47 63.8
SEGI_24666 Sequoiadendron giganteum HOM05D001966 ORTHO05D011119 9.0e-07 57.8 34 82.4
arahy.Tifrunner.gnm1.ann1.SGU002 Arachis hypogaea HOM05D000213 ORTHO05D000426 1.5e-06 57.0 40 70.0
EL10As15g24133 Beta vulgaris HOM05D004182 ORTHO05D007321 1.5e-06 57.0 34 79.4
C09p39340 Brassica napus HOM05D001966 ORTHO05D007227 1.5e-06 57.0 34 79.4
C09p40270 Brassica napus HOM05D004182 ORTHO05D007321 1.5e-06 57.0 34 79.4
BraSC58t46465Z Brassica rapa HOM05D004182 ORTHO05D007321 1.5e-06 57.0 34 79.4
Sc05g0004140 Simmondsia chinensis HOM05D001966 ORTHO05D011119 2.6e-06 56.2 37 70.3
BraSC59t46543Z Brassica rapa HOM05D004182 ORTHO05D007321 3.4e-06 55.8 33 78.8


User provided reference genes

Program Settings