Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu058281.1 Olea europaea HOM05D007994 ORTHO05D010092 7.8e-67 256.9 123 100.0
Cc01_g09740 Coffea canephora HOM05D007994 ORTHO05D010092 9.3e-20 100.5 99 49.5
MSTRG.12356 Avicennia marina HOM05D007994 ORTHO05D010092 2.3e-18 95.9 73 57.5
QL01p013577 Quercus lobata HOM05D007994 ORTHO05D010092 5.1e-18 94.7 93 51.6
Migut.N02511 Erythranthe guttata HOM05D007994 ORTHO05D010092 6.7e-18 94.4 77 58.4
vmacro14359 Vaccinium macrocarpon HOM05D007994 ORTHO05D010092 1.9e-17 92.8 124 46.8
Dinv12515 Davidia involucrata HOM05D007994 ORTHO05D010092 3.3e-17 92.0 67 62.7
TAR623G0693 Trochodendron aralioides HOM05D007994 ORTHO05D010092 7.4e-17 90.9 59 64.4
TWI75G1300 Tripterygium wilfordii HOM05D007994 ORTHO05D010092 2.8e-16 89.0 72 52.8
CiPaw.13G140400 Carya illinoinensis HOM05D007994 ORTHO05D010092 8.2e-16 87.4 75 56.0
Aqoxy4G02880 Aquilegia oxysepala HOM05D007994 ORTHO05D010092 1.4e-15 86.7 84 52.4
Ciclev10029500m.g Citrus clementina HOM05D007994 ORTHO05D010092 2.4e-15 85.9 65 58.5
Cfa010076 Carpinus fangiana HOM05D007994 ORTHO05D010092 6.9e-15 84.3 69 56.5
MD03G1135900 Malus domestica HOM05D007994 ORTHO05D010092 2.0e-14 82.8 59 64.4
GSVIVG01031390001 Vitis vinifera HOM05D007994 ORTHO05D010092 3.4e-14 82.0 63 52.4
Atru.chr3.3364 Acer truncatum HOM05D007994 ORTHO05D010092 4.5e-14 81.6 61 57.4
CsaV3_1G014550 Cucumis sativus L. HOM05D007994 ORTHO05D010092 4.5e-14 81.6 67 53.7
Duzib168G2077 Durio zibethinus HOM05D007994 ORTHO05D010092 4.5e-14 81.6 73 49.3
ClCG01G012620 Citrullus lanatus HOM05D007994 ORTHO05D010092 5.9e-14 81.3 66 54.5
Rhsim01G0207500 Rhododendron simsii HOM05D007994 ORTHO05D010092 7.7e-14 80.9 97 45.4
Actinidia35451 Actinidia chinensis HOM05D000078 ORTHO05D010092 1.0e-13 80.5 67 55.2
Manes.11G158100 Manihot esculenta HOM05D007994 ORTHO05D010092 1.3e-13 80.1 70 52.9
Sabra09G0116600 Salix brachista HOM05D007994 ORTHO05D010092 1.3e-13 80.1 70 52.9
MELO3C004786.2 Cucumis melo HOM05D007994 ORTHO05D010092 1.7e-13 79.7 67 53.7
Potri.009G148200 Populus trichocarpa HOM05D007994 ORTHO05D010092 2.2e-13 79.3 69 49.3
SalBow3G1236 Salvia bowleyana HOM05D007994 ORTHO05D010092 2.2e-13 79.3 65 53.8
Thecc.09G290600 Theobroma cacao HOM05D007994 ORTHO05D010092 2.9e-13 79.0 72 48.6
TPR.G15591 Trifolium pratense HOM05D007994 ORTHO05D010092 3.8e-13 78.6 115 43.5
Gohir.A09G093700 Gossypium hirsutum HOM05D007994 ORTHO05D010092 5.0e-13 78.2 60 55.0
Prupe.6G120200 Prunus persica HOM05D007994 ORTHO05D010092 5.0e-13 78.2 78 46.2
PGSC0003DMG400026538 Solanum tuberosum HOM05D007994 ORTHO05D010092 5.0e-13 78.2 60 58.3
THA.LOC104814803 Tarenaya hassleriana HOM05D007994 ORTHO05D010092 6.5e-13 77.8 41 75.6
Gohir.D09G093400 Gossypium hirsutum HOM05D007994 ORTHO05D010092 1.9e-12 76.3 67 52.2
Nn2g14036 Nelumbo nucifera HOM05D007994 ORTHO05D010092 1.9e-12 76.3 58 56.9
Solyc11g066940.2 Solanum lycopersicum HOM05D007994 ORTHO05D010092 1.9e-12 76.3 60 56.7
Sopen11g026660 Solanum pennellii HOM05D007994 ORTHO05D010092 1.9e-12 76.3 60 56.7
COL.COLO4_19306 Corchorus olitorius HOM05D007994 ORTHO05D010092 2.5e-12 75.9 65 53.8
Duzib170G0069 Durio zibethinus HOM05D007994 ORTHO05D010092 2.5e-12 75.9 72 47.2
Eucgr.J00433 Eucalyptus grandis HOM05D007994 ORTHO05D010092 2.5e-12 75.9 83 45.8
CANSAT54G1189 Cannabis sativa HOM05D007994 ORTHO05D010092 3.2e-12 75.5 60 55.0
Sed0020093 Sechium edule HOM05D007994 ORTHO05D010092 4.2e-12 75.1 59 52.5
PGR119G1356 Punica granatum HOM05D007994 ORTHO05D010092 7.2e-12 74.3 39 69.2
Gorai.006G110000 Gossypium raimondii HOM05D007994 ORTHO05D010092 1.2e-11 73.6 43 65.1
Peaxi162Scf00002g05422 Petunia axillaris HOM05D007994 ORTHO05D010092 1.6e-11 73.2 60 55.0
ATR0820G083 Amborella trichopoda HOM05D007994 ORTHO05D010092 2.1e-11 72.8 103 37.9
Haze_23442 Corylus avellana HOM05D007994 ORTHO05D010092 2.7e-11 72.4 42 69.0
Medtr4g055130 Medicago truncatula HOM05D007994 ORTHO05D010092 2.7e-11 72.4 124 35.5
PSO339G3278 Papaver somniferum HOM05D007994 ORTHO05D010092 6.1e-11 71.2 50 56.0
RcHm_v2.0_Chr5g0054991 Rosa chinensis HOM05D007994 ORTHO05D010092 7.9e-11 70.9 60 51.7
Phvul.005G126500 Phaseolus vulgaris HOM05D007994 ORTHO05D010092 2.3e-10 69.3 54 53.7
FAN16G1405 Fragaria x ananassa HOM05D007994 ORTHO05D010092 8.8e-10 67.4 60 48.3
Glyma.11G188500 Glycine max HOM05D007994 ORTHO05D010092 1.1e-09 67.0 50 62.0
AL5G22890 Arabidopsis lyrata HOM05D007994 ORTHO05D010092 2.6e-09 65.9 37 64.9
Carub.0005s1038 Capsella rubella HOM05D007994 ORTHO05D010092 2.6e-09 65.9 37 62.2
Carub.0015s0006 Capsella rubella HOM05D007994 ORTHO05D010092 2.6e-09 65.9 37 62.2
VMungo1127G0625 Vigna mungo HOM05D007994 ORTHO05D010092 2.6e-09 65.9 59 54.2
Phvul.011G091200 Phaseolus vulgaris HOM05D007994 ORTHO05D010092 4.4e-09 65.1 53 58.5
Sp5g16480 Schrenkiella parvula HOM05D007994 ORTHO05D010092 5.7e-09 64.7 37 62.2
BcaB01g01144 Brassica carinata HOM05D007994 ORTHO05D010092 7.4e-09 64.3 61 45.9
BcaC01g02012 Brassica carinata HOM05D007994 ORTHO05D010092 1.3e-08 63.5 61 45.9
A06p21760 Brassica napus HOM05D007994 ORTHO05D010092 1.3e-08 63.5 61 45.9
C03p69540 Brassica napus HOM05D007994 ORTHO05D010092 1.3e-08 63.5 61 45.9
BolC3t19209H Brassica oleracea HOM05D007994 ORTHO05D010092 1.3e-08 63.5 61 45.9
BraA06t25263Z Brassica rapa HOM05D007994 ORTHO05D010092 1.3e-08 63.5 61 45.9
AT3G44716 Arabidopsis thaliana HOM05D007994 ORTHO05D010092 1.7e-08 63.2 37 62.2
PSO384G4503 Papaver somniferum HOM05D007994 ORTHO05D010092 3.7e-08 62.0 42 59.5
Rhsim12G0093900 Rhododendron simsii HOM05D007994 ORTHO05D010092 4.8e-08 61.6 88 43.2
VMungo1080G0008 Vigna mungo HOM05D007994 ORTHO05D010092 1.8e-07 59.7 69 43.5
SEGI_15329 Sequoiadendron giganteum HOM05D007994 ORTHO05D010092 2.4e-07 59.3 58 43.1
Medtr4g053310 Medicago truncatula HOM05D007994 ORTHO05D010092 4.1e-07 58.5 109 32.1
Psat7g190280 Pisum sativum HOM05D007994 ORTHO05D010092 4.1e-07 58.5 50 52.0
CARHR151480 Cardamine hirsuta HOM05D007994 ORTHO05D010092 5.3e-07 58.2 37 54.1
Lalb_Chr19g0136731 Lupinus albus HOM05D007994 ORTHO05D010092 5.3e-07 58.2 57 47.4
Lj3g0008283 Lotus japonicus HOM05D007994 ORTHO05D010092 5.9e-06 54.7 50 48.0


User provided reference genes

Program Settings