Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu058218.1 Olea europaea HOM05D005992 ORTHO05D007476 2.5e-95 352.1 175 100.0
SGA_v2.0_scaffold8G04484 Striga asiatica HOM05D005992 ORTHO05D007476 4.4e-55 218.4 175 64.0
Cc01_g15730 Coffea canephora HOM05D005992 ORTHO05D007476 5.7e-55 218.0 169 65.1
Migut.D00757 Erythranthe guttata HOM05D005992 ORTHO05D007476 5.7e-55 218.0 171 63.2
SalBow6G0883 Salvia bowleyana HOM05D005992 ORTHO05D007476 4.1e-53 211.8 182 60.4
SalBow2G0316 Salvia bowleyana HOM05D005992 ORTHO05D007476 2.7e-49 199.1 212 51.4
MSTRG.18519 Avicennia marina HOM05D005992 ORTHO05D007476 3.0e-48 195.7 154 64.9
CSS0023701 Camellia sinensis var. sinensis HOM05D005992 ORTHO05D007476 1.6e-44 183.3 180 56.1
CSS0036227 Camellia sinensis var. sinensis HOM05D005992 ORTHO05D007476 1.6e-44 183.3 180 56.1
Nitab4.5_0009028g0010 Nicotiana tabacum HOM05D005992 ORTHO05D007476 7.7e-44 181.0 170 58.8
Nitab4.5_0001348g0200 Nicotiana tabacum HOM05D005992 ORTHO05D007476 2.3e-43 179.5 170 58.8
PGSC0003DMG400027679 Solanum tuberosum HOM05D005992 ORTHO05D007476 5.0e-43 178.3 175 57.1
Oeu064700.1 Olea europaea HOM05D005992 ORTHO05D007476 8.6e-43 177.6 112 76.8
Peaxi162Scf00390g00125 Petunia axillaris HOM05D005992 ORTHO05D007476 8.6e-43 177.6 170 58.8
Sopen06g034190 Solanum pennellii HOM05D005992 ORTHO05D007476 8.6e-43 177.6 175 56.6
Nitab4.5_0005967g0050 Nicotiana tabacum HOM05D005992 ORTHO05D007476 1.1e-42 177.2 169 56.8
Nitab4.5_0008751g0010 Nicotiana tabacum HOM05D005992 ORTHO05D007476 1.1e-42 177.2 170 58.2
Hma1.2p1_0161F.1_g071860 Hydrangea macrophylla HOM05D005992 ORTHO05D007476 4.7e-41 171.8 171 53.8
HanXRQChr08g0230801 Helianthus annuus HOM05D005992 ORTHO05D007476 1.4e-40 170.2 172 51.2
Hma1.2p1_0834F.1_g225730 Hydrangea macrophylla HOM05D005992 ORTHO05D007476 2.3e-40 169.5 170 53.5
Solyc06g082830.3 Solanum lycopersicum HOM05D005992 ORTHO05D007476 3.0e-40 169.1 175 56.0
CAN.G874.50 Capsicum annuum HOM05D005992 ORTHO05D007476 2.0e-39 166.4 175 53.1
Cpa.g.sc8.7 Carica papaya HOM05D005992 ORTHO05D007476 3.7e-38 162.2 171 52.6
Dinv28773 Davidia involucrata HOM05D005992 ORTHO05D007476 3.7e-38 162.2 170 51.2
Lsat_1_v5_gn_9_15721 Lactuca sativa HOM05D005992 ORTHO05D007476 6.4e-38 161.4 175 52.0
unitig_60.g25570 Utricularia gibba HOM05D005992 ORTHO05D007476 4.6e-36 155.2 166 53.0
ECA247G1400 Erigeron canadensis HOM05D005992 ORTHO05D007476 5.6e-34 148.3 157 52.2
Manes.13G058400 Manihot esculenta HOM05D005992 ORTHO05D007476 3.6e-33 145.6 172 50.6
Psat5g001840 Pisum sativum HOM05D005992 ORTHO05D007476 8.0e-33 144.4 176 47.7
Potri.014G172600 Populus trichocarpa HOM05D005992 ORTHO05D007476 1.4e-32 143.7 176 50.0
Medtr3g118100 Medicago truncatula HOM05D005992 ORTHO05D007476 1.5e-31 140.2 177 45.8
CANSAT11G0965 Cannabis sativa HOM05D005992 ORTHO05D007476 4.4e-31 138.7 170 48.2
Gohir.D11G152400 Gossypium hirsutum HOM05D005992 ORTHO05D007476 5.8e-31 138.3 173 49.7
Gorai.007G163000 Gossypium raimondii HOM05D005992 ORTHO05D007476 5.8e-31 138.3 173 49.7
FAN04G1498 Fragaria x ananassa HOM05D005992 ORTHO05D007476 7.5e-31 137.9 172 48.8
CiPaw.13G059000 Carya illinoinensis HOM05D005992 ORTHO05D007476 9.8e-31 137.5 176 47.7
Gohir.A11G146200 Gossypium hirsutum HOM05D005992 ORTHO05D007476 9.8e-31 137.5 173 49.7
vmacro14669 Vaccinium macrocarpon HOM05D005992 ORTHO05D007476 9.8e-31 137.5 225 40.0
TWI36G0694 Tripterygium wilfordii HOM05D005992 ORTHO05D007476 1.3e-30 137.1 173 48.6
Phvul.009G118300 Phaseolus vulgaris HOM05D005992 ORTHO05D007476 1.7e-30 136.7 175 48.0
GSVIVG01004128001 Vitis vinifera HOM05D005992 ORTHO05D007476 3.7e-30 135.6 166 48.8
PGR044G1143 Punica granatum HOM05D005992 ORTHO05D007476 8.3e-30 134.4 148 52.0
FvH4_5g18680 Fragaria vesca HOM05D005992 ORTHO05D007476 1.1e-29 134.0 172 47.7
FAN13G0560 Fragaria x ananassa HOM05D005992 ORTHO05D007476 1.1e-29 134.0 172 47.7
TWI36G1335 Tripterygium wilfordii HOM05D005992 ORTHO05D007476 1.1e-29 134.0 173 47.4
arahy.Tifrunner.gnm1.ann1.DJH8FA Arachis hypogaea HOM05D005992 ORTHO05D007476 1.9e-29 133.3 177 47.5
FAN08G0048 Fragaria x ananassa HOM05D005992 ORTHO05D007476 2.4e-29 132.9 172 47.7
Ca_15291_v3 Cicer arietinum L. HOM05D005992 ORTHO05D007476 3.2e-29 132.5 200 44.0
Glyma.06G002700 Glycine max HOM05D005992 ORTHO05D007476 4.1e-29 132.1 175 45.7
TWI75G1816 Tripterygium wilfordii HOM05D005992 ORTHO05D007476 4.1e-29 132.1 173 47.4
Prupe.8G267200 Prunus persica HOM05D005992 ORTHO05D007476 5.4e-29 131.7 167 48.5
Glyma.04G002700 Glycine max HOM05D005992 ORTHO05D007476 7.0e-29 131.3 165 46.7
FAN18G0660 Fragaria x ananassa HOM05D005992 ORTHO05D007476 9.2e-29 131.0 172 47.1
Manes.12G055803 Manihot esculenta HOM05D005992 ORTHO05D007476 9.2e-29 131.0 171 46.2
RcHm_v2.0_Chr7g0176831 Rosa chinensis HOM05D005992 ORTHO05D007476 9.2e-29 131.0 171 48.0
VMungo1309G0397 Vigna mungo HOM05D005992 ORTHO05D007476 1.2e-28 130.6 173 48.6
Nn7g37421 Nelumbo nucifera HOM05D005992 ORTHO05D007476 2.0e-28 129.8 168 46.4
Lj1C108T9 Lonicera japonica HOM05D005992 ORTHO05D007476 2.7e-28 129.4 110 58.2
Eucgr.K02345 Eucalyptus grandis HOM05D005992 ORTHO05D007476 7.8e-28 127.9 172 47.1
QL09p044779 Quercus lobata HOM05D005992 ORTHO05D007476 7.8e-28 127.9 176 42.6
Sc10g0006540 Simmondsia chinensis HOM05D005992 ORTHO05D007476 1.7e-27 126.7 153 46.4
MD03G1298800 Malus domestica HOM05D005992 ORTHO05D007476 2.3e-27 126.3 174 46.6
Thecc.01G203400 Theobroma cacao HOM05D005992 ORTHO05D007476 2.3e-27 126.3 173 47.4
Ciclev10016954m.g Citrus clementina HOM05D005992 ORTHO05D007476 3.9e-27 125.6 167 44.3
AUR62017763 Chenopodium quinoa HOM05D005992 ORTHO05D007476 5.0e-27 125.2 172 41.9
Lj1g0017920 Lotus japonicus HOM05D005992 ORTHO05D007476 5.0e-27 125.2 170 44.7
Rhsim01G0246100 Rhododendron simsii HOM05D005992 ORTHO05D007476 1.9e-26 123.2 224 37.9
DCAR_018600 Daucus carota HOM05D005992 ORTHO05D007476 1.2e-25 120.6 204 39.7
Duzib138G0279 Durio zibethinus HOM05D005992 ORTHO05D007476 1.2e-25 120.6 173 44.5
Duzib133G0028 Durio zibethinus HOM05D005992 ORTHO05D007476 1.6e-25 120.2 173 43.9
Atru.chr6.3466 Acer truncatum HOM05D005992 ORTHO05D007476 3.6e-25 119.0 174 43.7
COL.COLO4_19718 Corchorus olitorius HOM05D005992 ORTHO05D007476 3.6e-25 119.0 173 45.1
Lalb_Chr11g0061201 Lupinus albus HOM05D005992 ORTHO05D007476 6.2e-25 118.2 147 47.6
PSO357G0365 Papaver somniferum HOM05D005992 ORTHO05D007476 1.4e-24 117.1 165 46.7
arahy.Tifrunner.gnm1.ann1.B4TR6Y Arachis hypogaea HOM05D005992 ORTHO05D007476 1.8e-24 116.7 171 44.4
PSO170G4201 Papaver somniferum HOM05D005992 ORTHO05D007476 1.2e-23 114.0 165 47.3
Ah.04g163410 Amaranthus hybridus HOM05D005992 ORTHO05D007476 9.8e-23 110.9 168 38.7
HPP92_004514 Vanilla planifolia HOM05D005992 ORTHO05D007476 9.8e-23 110.9 155 42.6
CDE07G1966 Ceratophyllum demersum HOM05D005992 ORTHO05D007476 2.9e-22 109.4 149 44.3
Hma1.2p1_1756F.1_g301045 Hydrangea macrophylla HOM05D005992 ORTHO05D007476 6.4e-22 108.2 106 53.8
MBI07_g44661_MAGBIO Magnolia biondii HOM05D005992 ORTHO05D007476 1.4e-21 107.1 149 45.6
CDE04G1688 Ceratophyllum demersum HOM05D005992 ORTHO05D007476 1.2e-20 104.0 149 42.3
EL10Ac9g23025 Beta vulgaris HOM05D005992 ORTHO05D007476 2.1e-20 103.2 140 42.1
TPR.G38510 Trifolium pratense HOM05D005992 ORTHO05D007476 4.6e-20 102.1 137 43.1
Os02g0609400 Oryza sativa ssp. japonica HOM05D005992 ORTHO05D007476 7.8e-20 101.3 124 43.5
Sabra14G0132200 Salix brachista HOM05D005992 ORTHO05D007476 1.3e-19 100.5 217 35.9
THA.LOC104822452 Tarenaya hassleriana HOM05D005992 ORTHO05D007476 3.9e-19 99.0 154 40.3
Aqoxy2G04184 Aquilegia oxysepala HOM05D001906 ORTHO05D002083 8.6e-19 97.8 149 39.6
TAR362G0776 Trochodendron aralioides HOM05D005992 ORTHO05D007476 1.5e-18 97.1 104 54.8
PGSC0003DMG400020300 Solanum tuberosum HOM05D005992 ORTHO05D007476 1.9e-18 96.7 101 55.4
CiPaw.14G047400 Carya illinoinensis HOM05D005992 ORTHO05D007476 2.5e-18 96.3 134 44.8
Zm00001eb246760 Zea mays HOM05D005992 ORTHO05D007476 4.3e-18 95.5 139 40.3
AUR62032915 Chenopodium quinoa HOM05D005992 ORTHO05D007476 7.3e-18 94.7 137 39.4
ATR0743G072 Amborella trichopoda HOM05D005992 ORTHO05D007476 6.8e-16 88.2 146 38.4
TWI18G0378 Tripterygium wilfordii HOM05D005992 ORTHO05D007476 1.5e-15 87.0 140 41.4
THA.LOC104819021 Tarenaya hassleriana HOM05D005992 ORTHO05D007476 3.4e-15 85.9 146 37.0
Os02g0599500 Oryza sativa ssp. japonica HOM05D005992 ORTHO05D007476 1.3e-14 84.0 120 39.2
Sopen09g012660 Solanum pennellii HOM05D005992 ORTHO05D007476 6.4e-14 81.6 66 56.1
AT5G48335 Arabidopsis thaliana HOM05D005992 ORTHO05D007476 1.3e-11 73.9 139 38.1
AL8G21060 Arabidopsis lyrata HOM05D005992 ORTHO05D007476 2.3e-11 73.2 139 38.8
CARHR183920 Cardamine hirsuta HOM05D005992 ORTHO05D007476 5.1e-11 72.0 146 35.6
Actinidia23817 Actinidia chinensis HOM05D005992 ORTHO05D007476 6.6e-11 71.6 79 53.2
Carub.0008s0791 Capsella rubella HOM05D005992 ORTHO05D007476 8.1e-09 64.7 142 37.3
BraA05t22792Z Brassica rapa HOM05D005992 ORTHO05D007476 3.1e-08 62.8 152 32.2
Thhalv10021713m.g Eutrema salsugineum HOM05D005992 ORTHO05D007476 6.8e-08 61.6 148 34.5
Sp3g06520 Schrenkiella parvula HOM05D005992 ORTHO05D007476 1.2e-07 60.8 148 31.8
A05p40610 Brassica napus HOM05D005992 ORTHO05D007476 9.9e-07 57.8 151 29.1
Carub.0003s0715 Capsella rubella HOM05D005992 ORTHO05D007476 2.2e-06 56.6 90 36.7
Gohir.D11G007175 Gossypium hirsutum HOM05D005992 ORTHO05D007476 3.8e-06 55.8 54 51.9


User provided reference genes

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