Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu058117.1 Olea europaea HOM05D003555 ORTHO05D004542 2.3e-174 615.5 328 100.0
Oeu058121.1 Olea europaea HOM05D003555 ORTHO05D004542 6.8e-102 374.8 297 71.4
SalBow1G4818 Salvia bowleyana HOM05D003555 ORTHO05D004542 5.3e-94 348.6 297 67.7
MSTRG.11256 Avicennia marina HOM05D003555 ORTHO05D004542 6.9e-94 348.2 296 67.6
Migut.D01225 Erythranthe guttata HOM05D003555 ORTHO05D004542 5.8e-93 345.1 305 63.6
unitig_61.g26203 Utricularia gibba HOM05D003555 ORTHO05D004542 1.3e-92 344.0 305 63.6
MSTRG.22881 Avicennia marina HOM05D003555 ORTHO05D004542 3.8e-92 342.4 305 64.6
ECA232G4336 Erigeron canadensis HOM05D003555 ORTHO05D004542 4.9e-92 342.0 302 63.6
Sopen03g028540 Solanum pennellii HOM05D003555 ORTHO05D004542 6.4e-92 341.7 305 64.3
CAN.G637.54 Capsicum annuum HOM05D003555 ORTHO05D004542 8.4e-92 341.3 305 63.9
HanXRQChr16g0528421 Helianthus annuus HOM05D003555 ORTHO05D004542 1.1e-91 340.9 305 63.9
Lj5A90G23 Lonicera japonica HOM05D003555 ORTHO05D004542 1.1e-91 340.9 304 63.2
Cc05_g01690 Coffea canephora HOM05D003555 ORTHO05D004542 3.2e-91 339.3 302 63.9
Solyc03g097800.4 Solanum lycopersicum HOM05D003555 ORTHO05D004542 4.2e-91 339.0 305 63.9
Peaxi162Scf00171g01130 Petunia axillaris HOM05D003555 ORTHO05D004542 7.1e-91 338.2 305 63.9
DCAR_021412 Daucus carota HOM05D003555 ORTHO05D004542 9.3e-91 337.8 296 64.2
Dinv11219 Davidia involucrata HOM05D003555 ORTHO05D004542 1.2e-90 337.4 316 62.7
Dinv23202 Davidia involucrata HOM05D003555 ORTHO05D004542 2.7e-90 336.3 305 63.3
CAN.G257.127 Capsicum annuum HOM05D003555 ORTHO05D004542 3.5e-90 335.9 306 63.4
Lsat_1_v5_gn_4_84140 Lactuca sativa HOM05D003555 ORTHO05D004542 5.1e-89 332.0 305 63.0
DCAR_016355 Daucus carota HOM05D003555 ORTHO05D004542 1.9e-88 330.1 296 63.2
Lsat_1_v5_gn_6_50360 Lactuca sativa HOM05D003555 ORTHO05D004542 1.9e-88 330.1 302 62.9
CSS0013918 Camellia sinensis var. sinensis HOM05D003555 ORTHO05D004542 4.3e-88 328.9 297 65.3
CSS0044185 Camellia sinensis var. sinensis HOM05D003555 ORTHO05D004542 5.6e-88 328.6 297 65.0
GSVIVG01033006001 Vitis vinifera HOM05D003555 ORTHO05D004542 5.6e-88 328.6 296 63.9
Actinidia18318 Actinidia chinensis HOM05D003555 ORTHO05D004542 7.4e-88 328.2 309 62.1
Actinidia25536 Actinidia chinensis HOM05D003555 ORTHO05D004542 7.4e-88 328.2 309 61.8
Hma1.2p1_1187F.1_g265140 Hydrangea macrophylla HOM05D003555 ORTHO05D004542 2.1e-87 326.6 305 61.3
Hma1.2p1_1187F.1_g265130 Hydrangea macrophylla HOM05D003555 ORTHO05D004542 2.8e-87 326.2 302 61.6
Cfa007176 Carpinus fangiana HOM05D003555 ORTHO05D004542 8.1e-87 324.7 294 64.3
TWI34G1938 Tripterygium wilfordii HOM05D003555 ORTHO05D004542 1.1e-86 324.3 296 64.5
TAR629G2425 Trochodendron aralioides HOM05D003555 ORTHO05D004542 1.4e-86 323.9 304 60.5
vmacro19161 Vaccinium macrocarpon HOM05D003555 ORTHO05D004542 1.4e-86 323.9 305 62.0
Eucgr.G01943 Eucalyptus grandis HOM05D003555 ORTHO05D004542 2.4e-86 323.2 306 61.1
Manes.04G091900 Manihot esculenta HOM05D003555 ORTHO05D004542 2.4e-86 323.2 296 63.5
Psat0s1497g0040 Pisum sativum HOM05D003555 ORTHO05D004542 2.4e-86 323.2 304 59.5
Prupe.3G312200 Prunus persica HOM05D003555 ORTHO05D004542 2.4e-86 323.2 296 63.5
Actinidia36835 Actinidia chinensis HOM05D003555 ORTHO05D004542 9.0e-86 321.2 305 61.3
Medtr7g083720 Medicago truncatula HOM05D003555 ORTHO05D004542 1.2e-85 320.9 304 59.9
Ciclev10015638m.g Citrus clementina HOM05D003555 ORTHO05D004542 2.0e-85 320.1 304 60.2
Gohir.D11G067700 Gossypium hirsutum HOM05D003555 ORTHO05D004542 2.0e-85 320.1 308 60.1
Gohir.A11G063400 Gossypium hirsutum HOM05D003555 ORTHO05D004542 3.4e-85 319.3 308 59.4
TPR.G17457 Trifolium pratense HOM05D003555 ORTHO05D004542 3.4e-85 319.3 304 58.9
RcHm_v2.0_Chr2g0176361 Rosa chinensis HOM05D003555 ORTHO05D004542 4.5e-85 318.9 305 61.3
TWI60G1549 Tripterygium wilfordii HOM05D003555 ORTHO05D004542 5.8e-85 318.5 305 60.3
Duzib264G0281 Durio zibethinus HOM05D003555 ORTHO05D004542 7.6e-85 318.2 305 61.3
THA.LOC104805306 Tarenaya hassleriana HOM05D003555 ORTHO05D004542 7.6e-85 318.2 309 58.9
GSVIVG01008626001 Vitis vinifera HOM05D003555 ORTHO05D004542 7.6e-85 318.2 304 60.2
COL.COLO4_10540 Corchorus olitorius HOM05D003555 ORTHO05D004542 9.9e-85 317.8 297 62.6
C05p10440 Brassica napus HOM05D003555 ORTHO05D004542 1.3e-84 317.4 309 57.9
BolC5t29790H Brassica oleracea HOM05D003555 ORTHO05D004542 1.3e-84 317.4 309 57.9
Thecc.04G045300 Theobroma cacao HOM05D003555 ORTHO05D004542 1.3e-84 317.4 305 61.0
MD09G1004500 Malus domestica HOM05D003555 ORTHO05D004542 1.7e-84 317.0 315 59.0
MD17G1008500 Malus domestica HOM05D003555 ORTHO05D004542 2.2e-84 316.6 296 62.5
Aa31LG1G1920 Aethionema arabicum HOM05D003555 ORTHO05D004542 2.9e-84 316.2 304 60.2
Ca_08125_v3 Cicer arietinum L. HOM05D003555 ORTHO05D004542 2.9e-84 316.2 300 58.0
AL1G24480 Arabidopsis lyrata HOM05D003555 ORTHO05D004542 3.8e-84 315.8 309 58.6
Lalb_Chr14g0363981 Lupinus albus HOM05D003555 ORTHO05D004542 3.8e-84 315.8 294 61.9
Phvul.004G070900 Phaseolus vulgaris HOM05D003555 ORTHO05D004542 3.8e-84 315.8 298 61.4
AUR62015995 Chenopodium quinoa HOM05D003555 ORTHO05D004542 4.9e-84 315.5 304 59.9
Glyma.19G101000 Glycine max HOM05D003555 ORTHO05D004542 4.9e-84 315.5 309 59.5
Gohir.A05G334700 Gossypium hirsutum HOM05D003555 ORTHO05D004542 4.9e-84 315.5 294 61.6
BcaC05g25150 Brassica carinata HOM05D003555 ORTHO05D004542 6.4e-84 315.1 309 57.6
CARHR013160 Cardamine hirsuta HOM05D003555 ORTHO05D004542 6.4e-84 315.1 309 58.3
CiPaw.04G001900 Carya illinoinensis HOM05D003555 ORTHO05D004542 6.4e-84 315.1 315 57.5
Hund11754 Selenicereus undatus HOM05D003555 ORTHO05D004542 6.4e-84 315.1 304 59.9
Atru.chr6.2636 Acer truncatum HOM05D003555 ORTHO05D004542 8.4e-84 314.7 305 59.3
arahy.Tifrunner.gnm1.ann1.N4MBCZ Arachis hypogaea HOM05D003555 ORTHO05D004542 8.4e-84 314.7 304 59.2
PSO478G0165 Papaver somniferum HOM05D003555 ORTHO05D004542 8.4e-84 314.7 306 61.1
Duzib187G1504 Durio zibethinus HOM05D003555 ORTHO05D004542 1.1e-83 314.3 305 60.7
FAN05G2121 Fragaria x ananassa HOM05D003555 ORTHO05D004542 1.1e-83 314.3 296 62.5
PGR083G2609 Punica granatum HOM05D003555 ORTHO05D004542 1.1e-83 314.3 309 57.3
VMungo0464G0001 Vigna mungo HOM05D003555 ORTHO05D004542 1.1e-83 314.3 296 62.5
AT1G12840 Arabidopsis thaliana HOM05D003555 ORTHO05D004542 1.4e-83 313.9 319 57.4
EL10Ac3g05664 Beta vulgaris HOM05D003555 ORTHO05D004542 1.4e-83 313.9 304 59.5
Lalb_Chr24g0403201 Lupinus albus HOM05D003555 ORTHO05D004542 1.4e-83 313.9 294 61.9
QL02p062748 Quercus lobata HOM05D003555 ORTHO05D004542 1.4e-83 313.9 294 61.6
CANSAT64G0789 Cannabis sativa HOM05D003555 ORTHO05D004542 1.9e-83 313.5 309 59.5
FAN02G1454 Fragaria x ananassa HOM05D003555 ORTHO05D004542 1.9e-83 313.5 296 62.5
Sp1g11410 Schrenkiella parvula HOM05D003555 ORTHO05D004542 1.9e-83 313.5 309 58.3
TAR374G1733 Trochodendron aralioides HOM05D003555 ORTHO05D004542 1.9e-83 313.5 296 61.5
arahy.Tifrunner.gnm1.ann1.HQ0MCX Arachis hypogaea HOM05D003555 ORTHO05D004542 3.2e-83 312.8 304 58.9
Glyma.02G065500 Glycine max HOM05D003555 ORTHO05D004542 3.2e-83 312.8 294 61.6
CsaV3_5G020170 Cucumis sativus L. HOM05D003555 ORTHO05D004542 4.2e-83 312.4 293 61.8
Glyma.16G146600 Glycine max HOM05D003555 ORTHO05D004542 4.2e-83 312.4 294 61.6
MELO3C025061.2 Cucumis melo HOM05D003555 ORTHO05D004542 5.5e-83 312.0 293 62.1
SGA_v2.0_scaffold14G07035 Striga asiatica HOM05D003555 ORTHO05D004542 5.5e-83 312.0 287 61.0
Cpa.g.sc70.83 Carica papaya HOM05D003555 ORTHO05D004542 7.1e-83 311.6 302 57.9
Glyma.16G050200 Glycine max HOM05D003555 ORTHO05D004542 7.1e-83 311.6 309 58.9
Gorai.012G082900 Gossypium raimondii HOM05D003555 ORTHO05D004542 7.1e-83 311.6 304 58.6
THA.LOC104823995 Tarenaya hassleriana HOM05D003555 ORTHO05D004542 7.1e-83 311.6 309 57.9
VMungo1383G1114 Vigna mungo HOM05D003555 ORTHO05D004542 7.1e-83 311.6 309 58.6
A06p08830 Brassica napus HOM05D003555 ORTHO05D004542 9.3e-83 311.2 309 57.9
C08p15700 Brassica napus HOM05D003555 ORTHO05D004542 9.3e-83 311.2 309 57.9
BraA06t24078Z Brassica rapa HOM05D003555 ORTHO05D004542 9.3e-83 311.2 309 57.9
THA.LOC104825653 Tarenaya hassleriana HOM05D003555 ORTHO05D004542 9.3e-83 311.2 309 58.3
A08p32590 Brassica napus HOM05D003555 ORTHO05D004542 1.2e-82 310.8 309 57.9
BolC8t49197H Brassica oleracea HOM05D003555 ORTHO05D004542 1.2e-82 310.8 309 57.9
BraA08t35183Z Brassica rapa HOM05D003555 ORTHO05D004542 1.2e-82 310.8 309 57.9
BcaB03g13163 Brassica carinata HOM05D003555 ORTHO05D004542 1.6e-82 310.5 309 57.9
Thhalv10007948m.g Eutrema salsugineum HOM05D003555 ORTHO05D004542 1.6e-82 310.5 309 57.3
FvH4_6g54180 Fragaria vesca HOM05D003555 ORTHO05D004542 1.6e-82 310.5 296 62.2
FAN09G3428 Fragaria x ananassa HOM05D003555 ORTHO05D004542 1.6e-82 310.5 296 62.2
FAN14G0379 Fragaria x ananassa HOM05D003555 ORTHO05D004542 1.6e-82 310.5 296 62.2
BcaC05g25110 Brassica carinata HOM05D003555 ORTHO05D004542 3.5e-82 309.3 309 57.0
Lj1g0000762 Lotus japonicus HOM05D003555 ORTHO05D004542 3.5e-82 309.3 304 57.9
Phvul.001G086700 Phaseolus vulgaris HOM05D003555 ORTHO05D004542 3.5e-82 309.3 304 58.6
Haze_14935 Corylus avellana HOM05D003555 ORTHO05D004542 4.6e-82 308.9 355 53.0
Os05g0593100 Oryza sativa ssp. japonica HOM05D003555 ORTHO05D004542 4.6e-82 308.9 321 55.1
BcaC07g40270 Brassica carinata HOM05D003555 ORTHO05D004542 6.0e-82 308.5 309 57.6
A09p63580 Brassica napus HOM05D003555 ORTHO05D004542 6.0e-82 308.5 309 57.6
BolC8t50972H Brassica oleracea HOM05D003555 ORTHO05D004542 6.0e-82 308.5 309 57.6
BraA09t41708Z Brassica rapa HOM05D003555 ORTHO05D004542 6.0e-82 308.5 309 57.6
BcaC07g41676 Brassica carinata HOM05D003555 ORTHO05D004542 7.9e-82 308.1 309 57.6
C08p47080 Brassica napus HOM05D003555 ORTHO05D004542 7.9e-82 308.1 309 57.6
Nn4g22182 Nelumbo nucifera HOM05D003555 ORTHO05D004542 7.9e-82 308.1 293 62.5
Potri.001G322500 Populus trichocarpa HOM05D003555 ORTHO05D004542 7.9e-82 308.1 309 58.3
Potri.017G061100 Populus trichocarpa HOM05D003555 ORTHO05D004542 7.9e-82 308.1 305 58.0
Gohir.D04G073600 Gossypium hirsutum HOM05D003555 ORTHO05D004542 1.0e-81 307.8 305 58.4
Sc13g0008590 Simmondsia chinensis HOM05D003555 ORTHO05D004542 1.0e-81 307.8 309 57.9
ATR0582G027 Amborella trichopoda HOM05D003555 ORTHO05D004542 1.3e-81 307.4 301 60.5
BolC8t52247H Brassica oleracea HOM05D003555 ORTHO05D004542 1.3e-81 307.4 309 57.6
ClCG01G008140 Citrullus lanatus HOM05D003555 ORTHO05D004542 1.3e-81 307.4 293 61.4
Sabra17G0054300 Salix brachista HOM05D003555 ORTHO05D004542 1.3e-81 307.4 292 60.3
Rhsim08G0195300 Rhododendron simsii HOM05D003555 ORTHO05D004542 1.8e-81 307.0 373 51.7
Duzib147G0304 Durio zibethinus HOM05D003555 ORTHO05D004542 2.3e-81 306.6 301 59.5
Ah.13g068520 Amaranthus hybridus HOM05D003555 ORTHO05D004542 3.0e-81 306.2 297 59.9
MBI11_g08158_MAGBIO Magnolia biondii HOM05D003555 ORTHO05D004542 3.0e-81 306.2 315 56.5
Zm00001eb297260 Zea mays HOM05D003555 ORTHO05D004542 5.1e-81 305.4 321 54.8
C08p33730 Brassica napus HOM05D003555 ORTHO05D004542 6.7e-81 305.1 309 57.3
TAR622G0101 Trochodendron aralioides HOM05D003555 ORTHO05D004542 6.7e-81 305.1 294 60.2
HPP92_022913 Vanilla planifolia HOM05D003555 ORTHO05D004542 6.7e-81 305.1 293 59.7
BcaB08g34247 Brassica carinata HOM05D003555 ORTHO05D004542 1.5e-80 303.9 309 56.6
Ah.07g207280 Amaranthus hybridus HOM05D003555 ORTHO05D004542 2.5e-80 303.1 304 57.2
Zm00001eb345260 Zea mays HOM05D003555 ORTHO05D004542 2.5e-80 303.1 321 54.2
QL02p069938 Quercus lobata HOM05D003555 ORTHO05D004542 4.3e-80 302.4 283 61.1
Hund04735 Selenicereus undatus HOM05D003555 ORTHO05D004542 4.3e-80 302.4 290 59.7
Sed0000891 Sechium edule HOM05D003555 ORTHO05D004542 7.4e-80 301.6 293 60.4
Carub.0001s1258 Capsella rubella HOM05D003555 ORTHO05D004542 2.1e-79 300.1 309 56.0
Sed0008328 Sechium edule HOM05D003555 ORTHO05D004542 3.7e-79 299.3 293 58.4
CDE05G2896 Ceratophyllum demersum HOM05D003555 ORTHO05D004542 2.0e-77 293.5 293 56.3
Nn5g27103 Nelumbo nucifera HOM05D003555 ORTHO05D004542 4.5e-77 292.4 302 56.0
Zm00001eb163710 Zea mays HOM05D003555 ORTHO05D004542 2.7e-74 283.1 321 51.7
Sabra16G0204700 Salix brachista HOM05D003555 ORTHO05D004542 6.0e-74 282.0 340 51.5
MBI07_g40357_MAGBIO Magnolia biondii HOM05D003555 ORTHO05D004542 1.0e-73 281.2 302 55.3
SEGI_35214 Sequoiadendron giganteum HOM05D003555 ORTHO05D004542 1.5e-72 277.3 313 50.8
Lsat_1_v5_gn_4_84120 Lactuca sativa HOM05D003555 ORTHO05D004542 1.6e-71 273.9 265 60.0
COL.COLO4_13344 Corchorus olitorius HOM05D003555 ORTHO05D004542 1.8e-70 270.4 297 56.6
Manes.11G078200 Manihot esculenta HOM05D003555 ORTHO05D004542 2.6e-69 266.5 258 61.2
Nn3g16313 Nelumbo nucifera HOM05D003555 ORTHO05D004542 6.5e-68 261.9 286 54.5
ECA246G0182 Erigeron canadensis HOM05D003555 ORTHO05D004542 1.1e-67 261.2 156 82.1
Sc25g0000460 Simmondsia chinensis HOM05D003555 ORTHO05D004542 1.4e-67 260.8 265 57.0
Gorai.007G072500 Gossypium raimondii HOM05D003555 ORTHO05D004542 3.0e-65 253.1 267 56.2
Mapoly0126s0013 Marchantia polymorpha HOM05D003555 ORTHO05D004542 3.9e-65 252.7 312 48.4
SMO200G0006 Selaginella moellendorffii HOM05D003555 ORTHO05D004542 1.1e-64 251.1 313 46.0
Lj9A484G61 Lonicera japonica HOM05D003555 ORTHO05D004542 3.1e-62 243.0 156 77.6
Pp3c13_14220 Physcomitrium patens HOM05D003555 ORTHO05D004542 4.5e-61 239.2 312 47.4
CDE05G1333 Ceratophyllum demersum HOM05D003555 ORTHO05D004542 6.5e-60 235.3 293 48.8
AagrBONN_evm.TU.Sc2ySwM_228.2553 Anthoceros agrestis HOM05D003555 ORTHO05D004542 6.5e-52 208.8 305 42.3
AUR62021202 Chenopodium quinoa HOM05D003555 ORTHO05D004542 8.5e-52 208.4 256 52.3
Nitab4.5_0007858g0030 Nicotiana tabacum HOM05D003555 ORTHO05D004542 2.7e-50 203.4 221 56.6
Nitab4.5_0005207g0040 Nicotiana tabacum HOM05D003555 ORTHO05D004542 1.0e-49 201.4 220 56.4
Eucgr.G01949 Eucalyptus grandis HOM05D003555 ORTHO05D004542 4.4e-48 196.1 222 54.5
HanXRQChr09g0273581 Helianthus annuus HOM05D003555 ORTHO05D004542 4.5e-45 186.0 156 64.7
PRCOL_00003348 Prasinoderma coloniale HOM05D003555 ORTHO05D004542 1.7e-44 184.1 295 38.3
CBR_g724 Chara braunii HOM05D003555 ORTHO05D004542 5.0e-44 182.6 166 54.8
Lsat_1_v5_gn_5_10760 Lactuca sativa HOM05D003555 ORTHO05D004542 2.5e-43 180.3 111 78.4
MCO15G152 Micromonas commoda HOM05D003555 ORTHO05D004542 2.3e-41 173.7 330 36.1
Cre06.g250250 Chlamydomonas reinhardtii HOM05D003555 ORTHO05D004542 2.0e-40 170.6 313 36.1
Pp3c9_8980 Physcomitrium patens HOM05D003555 ORTHO05D004542 3.3e-40 169.9 304 38.5
CSS0036109 Camellia sinensis var. sinensis HOM05D003555 ORTHO05D004542 2.0e-37 160.6 203 50.7
Haze_27306 Corylus avellana HOM05D003555 ORTHO05D163602 9.8e-32 141.7 307 33.2
FAN09G3010 Fragaria x ananassa HOM05D003555 ORTHO05D004542 2.7e-29 133.7 85 78.8
Actinidia08900 Actinidia chinensis HOM05D003555 ORTHO05D004542 1.0e-25 121.7 263 36.5
Lsat_1_v5_gn_4_68061 Lactuca sativa HOM05D004816 ORTHO05D006043 5.2e-25 119.4 127 51.2
BcaB01g02330 Brassica carinata HOM05D003555 ORTHO05D002990 2.1e-18 97.4 155 45.8
Cfa026601 Carpinus fangiana HOM05D003555 ORTHO05D123537 3.0e-17 93.6 311 26.4
Hma1.2p1_0403F.1_g145240 Hydrangea macrophylla HOM05D003555 ORTHO05D004542 3.2e-14 83.6 57 75.4
THA.LOC104805959 Tarenaya hassleriana HOM05D003555 ORTHO05D022543 4.6e-13 79.7 48 81.2
BcaC02g12651 Brassica carinata HOM05D003555 ORTHO05D095367 2.2e-07 60.8 150 35.3
Duzib114G0355 Durio zibethinus HOM05D003555 ORTHO05D186121 1.9e-06 57.8 41 68.3


User provided reference genes

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