Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu058056.1 Olea europaea HOM05D004174 ORTHO05D004624 8.7e-240 833.2 404 100.0
Dinv36548 Davidia involucrata HOM05D004174 ORTHO05D004624 7.4e-191 670.6 404 81.4
Cc06_g08790 Coffea canephora HOM05D004174 ORTHO05D004624 1.1e-189 666.8 390 81.8
MSTRG.19607 Avicennia marina HOM05D004174 ORTHO05D004624 2.2e-187 659.1 404 79.2
Peaxi162Scf02490g00007 Petunia axillaris HOM05D004174 ORTHO05D004624 1.4e-181 639.8 409 76.3
Hma1.2p1_0665F.1_g199150 Hydrangea macrophylla HOM05D004174 ORTHO05D004624 1.8e-181 639.4 398 78.6
SalBow3G2402 Salvia bowleyana HOM05D004174 ORTHO05D004624 4.1e-181 638.3 408 77.5
vmacro06177 Vaccinium macrocarpon HOM05D004174 ORTHO05D004624 3.5e-180 635.2 405 76.0
Actinidia07434 Actinidia chinensis HOM05D004174 ORTHO05D004624 1.0e-179 633.6 404 75.7
Prupe.7G239600 Prunus persica HOM05D004174 ORTHO05D004624 1.3e-179 633.3 402 75.1
TWI34G0924 Tripterygium wilfordii HOM05D004174 ORTHO05D004624 1.3e-179 633.3 406 75.4
Actinidia26403 Actinidia chinensis HOM05D004174 ORTHO05D004624 1.7e-179 632.9 404 75.7
MD00G1107300 Malus domestica HOM05D004174 ORTHO05D004624 2.9e-179 632.1 404 75.0
CiPaw.03G241700 Carya illinoinensis HOM05D004174 ORTHO05D004624 1.6e-177 626.3 407 75.4
PGSC0003DMG400024321 Solanum tuberosum HOM05D004174 ORTHO05D004624 4.7e-177 624.8 404 75.7
Sopen06g031500 Solanum pennellii HOM05D004174 ORTHO05D004624 1.0e-176 623.6 404 75.2
CAN.G1966.1 Capsicum annuum HOM05D004174 ORTHO05D004624 1.4e-176 623.2 404 75.7
Thecc.09G123000 Theobroma cacao HOM05D004174 ORTHO05D004624 1.8e-176 622.9 407 74.4
Atru.chr7.1197 Acer truncatum HOM05D004174 ORTHO05D004624 4.0e-176 621.7 409 73.6
Cfa003346 Carpinus fangiana HOM05D004174 ORTHO05D004624 5.2e-176 621.3 404 75.2
Eucgr.C04181 Eucalyptus grandis HOM05D004174 ORTHO05D004624 5.2e-176 621.3 404 74.8
Gohir.D13G204700 Gossypium hirsutum HOM05D004174 ORTHO05D004624 8.8e-176 620.5 413 74.3
Gorai.013G233600 Gossypium raimondii HOM05D004174 ORTHO05D004624 1.5e-175 619.8 413 74.3
COL.COLO4_05761 Corchorus olitorius HOM05D004174 ORTHO05D004624 2.0e-175 619.4 410 74.1
SGA_v2.0_scaffold229G43324 Striga asiatica HOM05D004174 ORTHO05D004624 2.6e-175 619.0 391 76.0
Migut.J01169 Erythranthe guttata HOM05D004174 ORTHO05D004624 3.4e-175 618.6 385 77.1
Gohir.A13G199200 Gossypium hirsutum HOM05D004174 ORTHO05D004624 3.4e-175 618.6 413 74.1
Solyc06g075080.4 Solanum lycopersicum HOM05D004174 ORTHO05D004624 5.7e-175 617.8 385 77.1
Haze_25614 Corylus avellana HOM05D004174 ORTHO05D004624 7.5e-175 617.5 404 74.8
MD02G1035600 Malus domestica HOM05D004174 ORTHO05D004624 7.5e-175 617.5 406 73.4
Nitab4.5_0006698g0010 Nicotiana tabacum HOM05D004174 ORTHO05D004624 2.2e-174 615.9 410 75.6
TAR383G0558 Trochodendron aralioides HOM05D004174 ORTHO05D004624 1.1e-173 613.6 390 75.6
FvH4_1g03600 Fragaria vesca HOM05D004174 ORTHO05D004624 4.1e-173 611.7 405 73.8
FAN19G0954 Fragaria x ananassa HOM05D004174 ORTHO05D004624 4.1e-173 611.7 405 73.8
CSS0035220 Camellia sinensis var. sinensis HOM05D004174 ORTHO05D004624 5.4e-173 611.3 359 81.3
Hund09144 Selenicereus undatus HOM05D004174 ORTHO05D004624 9.1e-173 610.5 399 71.7
RcHm_v2.0_Chr2g0089131 Rosa chinensis HOM05D004174 ORTHO05D004624 1.2e-172 610.1 384 76.6
FAN23G0992 Fragaria x ananassa HOM05D004174 ORTHO05D004624 2.7e-172 609.0 405 73.3
FAN28G1355 Fragaria x ananassa HOM05D004174 ORTHO05D004624 3.5e-172 608.6 405 72.8
TWI32G1270 Tripterygium wilfordii HOM05D004174 ORTHO05D004624 3.5e-172 608.6 406 72.2
Nitab4.5_0000106g0230 Nicotiana tabacum HOM05D004174 ORTHO05D004624 1.0e-171 607.1 388 77.3
QL02p087765 Quercus lobata HOM05D004174 ORTHO05D004624 2.3e-171 605.9 408 72.5
Nn8g39387 Nelumbo nucifera HOM05D004174 ORTHO05D004624 3.8e-171 605.1 404 74.0
Manes.14G130500 Manihot esculenta HOM05D004174 ORTHO05D004624 2.5e-170 602.4 404 72.3
Ciclev10008313m.g Citrus clementina HOM05D004174 ORTHO05D004624 1.2e-169 600.1 418 70.6
THA.LOC104811038 Tarenaya hassleriana HOM05D004174 ORTHO05D004624 1.0e-168 597.0 405 70.1
Aqoxy7G02096 Aquilegia oxysepala HOM05D004174 ORTHO05D004624 2.3e-168 595.9 405 70.9
Carub.0006s1845 Capsella rubella HOM05D004174 ORTHO05D004624 4.0e-168 595.1 405 70.1
HanXRQChr12g0368841 Helianthus annuus HOM05D004174 ORTHO05D004624 4.0e-168 595.1 390 73.6
Sc18g0000710 Simmondsia chinensis HOM05D004174 ORTHO05D004624 4.0e-168 595.1 382 74.3
Lsat_1_v5_gn_8_58900 Lactuca sativa HOM05D004174 ORTHO05D004624 6.8e-168 594.3 390 74.1
EL10Ac8g18616 Beta vulgaris HOM05D004174 ORTHO05D004624 8.8e-168 594.0 383 74.2
CANSAT11G0280 Cannabis sativa HOM05D004174 ORTHO05D004624 2.0e-167 592.8 408 71.8
Potri.018G070400 Populus trichocarpa HOM05D004174 ORTHO05D004624 2.6e-167 592.4 401 70.1
PGR102G0881 Punica granatum HOM05D004174 ORTHO05D004624 3.4e-167 592.0 409 70.4
FAN26G3217 Fragaria x ananassa HOM05D004174 ORTHO05D004624 5.7e-167 591.3 404 71.5
Duzib150G0384 Durio zibethinus HOM05D004174 ORTHO05D004624 9.8e-167 590.5 407 70.3
Aa31LG8G2170 Aethionema arabicum HOM05D004174 ORTHO05D004624 4.9e-166 588.2 387 72.1
Manes.06G050000 Manihot esculenta HOM05D004174 ORTHO05D004624 4.9e-166 588.2 404 71.0
CARHR192760 Cardamine hirsuta HOM05D004174 ORTHO05D004624 1.8e-165 586.3 400 69.8
HanXRQChr06g0180241 Helianthus annuus HOM05D004174 ORTHO05D004624 1.8e-165 586.3 400 72.2
AT5G20070 Arabidopsis thaliana HOM05D004174 ORTHO05D004624 2.4e-165 585.9 406 69.5
BcaC03g13730 Brassica carinata HOM05D004174 ORTHO05D004624 3.1e-165 585.5 407 69.5
Thhalv10013566m.g Eutrema salsugineum HOM05D004174 ORTHO05D004624 3.1e-165 585.5 406 69.5
Duzib187G0531 Durio zibethinus HOM05D004174 ORTHO05D004624 4.1e-165 585.1 415 69.4
DCAR_017828 Daucus carota HOM05D004174 ORTHO05D004624 1.2e-164 583.6 400 70.5
AL6G31620 Arabidopsis lyrata HOM05D004174 ORTHO05D004624 1.6e-164 583.2 406 69.2
Potri.006G154200 Populus trichocarpa HOM05D004174 ORTHO05D004624 1.6e-164 583.2 404 69.1
Sabra18G0061500 Salix brachista HOM05D004174 ORTHO05D004624 1.6e-164 583.2 386 71.2
Lsat_1_v5_gn_7_42401 Lactuca sativa HOM05D004174 ORTHO05D004624 2.7e-164 582.4 389 71.5
BcaB05g22875 Brassica carinata HOM05D004174 ORTHO05D004624 4.5e-164 581.6 407 69.5
COL.COLO4_17917 Corchorus olitorius HOM05D004174 ORTHO05D004624 1.0e-163 580.5 396 72.7
A02p06020 Brassica napus HOM05D004174 ORTHO05D004624 1.3e-163 580.1 407 69.0
BraA02t05553Z Brassica rapa HOM05D004174 ORTHO05D004624 1.3e-163 580.1 407 69.0
Sp6g24340 Schrenkiella parvula HOM05D004174 ORTHO05D004624 2.3e-163 579.3 402 69.7
MBI04_g24208_MAGBIO Magnolia biondii HOM05D004174 ORTHO05D004624 3.8e-163 578.6 405 70.1
PSO170G6838 Papaver somniferum HOM05D004174 ORTHO05D004624 3.8e-163 578.6 388 71.9
HanXRQChr03g0062501 Helianthus annuus HOM05D004174 ORTHO05D004624 8.6e-163 577.4 392 72.7
ClCG11G002850 Citrullus lanatus HOM05D004174 ORTHO05D004624 1.9e-162 576.2 405 67.9
THA.LOC104799651 Tarenaya hassleriana HOM05D004174 ORTHO05D004624 1.9e-162 576.2 394 68.8
CsaV3_2G002690 Cucumis sativus L. HOM05D004174 ORTHO05D004624 2.5e-162 575.9 404 67.8
BcaB01g04811 Brassica carinata HOM05D004174 ORTHO05D004624 7.3e-162 574.3 410 68.0
PSO455G0049 Papaver somniferum HOM05D004174 ORTHO05D004624 1.6e-161 573.2 388 71.9
Ca_03159_v3 Cicer arietinum L. HOM05D004174 ORTHO05D004624 8.9e-160 567.4 393 71.0
VMungo1309G2067 Vigna mungo HOM05D004174 ORTHO05D004624 1.2e-159 567.0 405 68.6
BNapus_Darmor_BZH_scaffold_38p01820 Brassica napus HOM05D004174 ORTHO05D004624 2.0e-159 566.2 407 68.1
Sed0019119 Sechium edule HOM05D004174 ORTHO05D004624 3.4e-159 565.5 405 67.4
MELO3C004525.2 Cucumis melo HOM05D004174 ORTHO05D004624 5.7e-159 564.7 404 66.8
BolC3t13612H Brassica oleracea HOM05D004174 ORTHO05D004624 1.4e-157 560.1 389 68.4
Psat1g025760 Pisum sativum HOM05D004174 ORTHO05D004624 1.8e-157 559.7 406 69.7
Rhsim03G0246500 Rhododendron simsii HOM05D004174 ORTHO05D004624 4.1e-157 558.5 349 77.9
Phvul.009G197200 Phaseolus vulgaris HOM05D004174 ORTHO05D004624 5.4e-157 558.1 405 68.6
Lalb_Chr23g0275331 Lupinus albus HOM05D004174 ORTHO05D004624 7.0e-157 557.8 405 66.9
C03p11380 Brassica napus HOM05D004174 ORTHO05D004624 9.2e-157 557.4 389 68.1
MD15G1175700 Malus domestica HOM05D004174 ORTHO05D004624 9.2e-157 557.4 456 63.2
A03p09800 Brassica napus HOM05D004174 ORTHO05D004624 1.2e-156 557.0 383 69.2
BraA03t10295Z Brassica rapa HOM05D004174 ORTHO05D004624 1.2e-156 557.0 383 69.2
Medtr2g054680 Medicago truncatula HOM05D004174 ORTHO05D004624 3.9e-155 552.0 406 67.7
TPR.G31095 Trifolium pratense HOM05D004174 ORTHO05D004624 2.5e-154 549.3 409 68.9
DCAR_009201 Daucus carota HOM05D004174 ORTHO05D004624 7.3e-154 547.7 388 68.6
Glyma.06G216700 Glycine max HOM05D004174 ORTHO05D004624 7.3e-154 547.7 408 68.9
Gohir.D08G260000 Gossypium hirsutum HOM05D004174 ORTHO05D004624 1.4e-152 543.5 405 65.4
Gorai.004G277900 Gossypium raimondii HOM05D004174 ORTHO05D004624 8.9e-152 540.8 414 64.7
Dinv41532 Davidia involucrata HOM05D004174 ORTHO05D004624 1.2e-151 540.4 307 83.7
Lj1g0010752 Lotus japonicus HOM05D004174 ORTHO05D004624 1.7e-150 536.6 410 66.8
ATR1156G006 Amborella trichopoda HOM05D004174 ORTHO05D004624 6.4e-150 534.6 413 67.6
ECA240G3275 Erigeron canadensis HOM05D004174 ORTHO05D004624 6.6e-147 524.6 351 72.4
arahy.Tifrunner.gnm1.ann1.SBVG8E Arachis hypogaea HOM05D004174 ORTHO05D004624 9.5e-146 520.8 402 64.2
Lalb_Chr08g0234871 Lupinus albus HOM05D004174 ORTHO05D004624 2.1e-145 519.6 394 65.5
GSVIVG01015501001 Vitis vinifera HOM05D004174 ORTHO05D004624 8.1e-145 517.7 309 79.6
Sed0008859 Sechium edule HOM05D004174 ORTHO05D004624 4.0e-144 515.4 391 63.9
AUR62033476 Chenopodium quinoa HOM05D004174 ORTHO05D004624 6.8e-144 514.6 405 63.7
Lalb_Chr07g0178801 Lupinus albus HOM05D004174 ORTHO05D004624 2.6e-143 512.7 382 64.4
arahy.Tifrunner.gnm1.ann1.E6UBTJ Arachis hypogaea HOM05D004174 ORTHO05D004624 3.4e-143 512.3 414 62.3
TPR.G10694 Trifolium pratense HOM05D004174 ORTHO05D004624 1.3e-142 510.4 384 64.3
MELO3C026643.2 Cucumis melo HOM05D004174 ORTHO05D004624 1.7e-142 510.0 390 64.1
Medtr4g113990 Medicago truncatula HOM05D004174 ORTHO05D004624 1.4e-141 506.9 379 65.2
Psat4g040360 Pisum sativum HOM05D004174 ORTHO05D004624 1.9e-141 506.5 384 63.8
Glyma.17G116600 Glycine max HOM05D004174 ORTHO05D004624 3.2e-141 505.8 395 62.0
HPP92_000685 Vanilla planifolia HOM05D004174 ORTHO05D004624 1.7e-139 500.0 403 62.5
HPP92_000661 Vanilla planifolia HOM05D004174 ORTHO05D004624 6.6e-139 498.0 403 62.0
Phvul.003G162700 Phaseolus vulgaris HOM05D004174 ORTHO05D004624 1.1e-138 497.3 383 64.2
CDE02G3646 Ceratophyllum demersum HOM05D004174 ORTHO05D004624 2.1e-137 493.0 384 63.5
VMungo1215G2625 Vigna mungo HOM05D004174 ORTHO05D004624 4.7e-137 491.9 380 64.2
Zm00001eb377430 Zea mays HOM05D004174 ORTHO05D004624 4.7e-137 491.9 396 63.9
Os06g0141166 Oryza sativa ssp. japonica HOM05D004174 ORTHO05D004624 5.4e-133 478.4 423 60.3
SEGI_17043 Sequoiadendron giganteum HOM05D004174 ORTHO05D004624 5.1e-131 471.9 384 60.9
ClCG06G010920 Citrullus lanatus HOM05D004174 ORTHO05D004624 7.1e-125 451.4 385 56.9
FAN26G0665 Fragaria x ananassa HOM05D004174 ORTHO05D004624 2.8e-121 439.5 263 80.6
Lj7A632G45 Lonicera japonica HOM05D004174 ORTHO05D004624 1.5e-114 417.2 276 72.8
Ah.02g124290 Amaranthus hybridus HOM05D004174 ORTHO05D004624 8.2e-105 384.8 250 71.6
Ah.14g080300 Amaranthus hybridus HOM05D004174 ORTHO05D004624 1.4e-104 384.0 246 72.0
Gohir.A08G239300 Gossypium hirsutum HOM05D004174 ORTHO05D004624 3.4e-103 379.4 281 64.8
AagrBONN_evm.TU.Sc2ySwM_368.699 Anthoceros agrestis HOM05D004174 ORTHO05D004624 1.9e-101 373.6 409 49.9
Lj4g0002160 Lotus japonicus HOM05D004174 ORTHO05D004624 9.7e-98 361.3 279 64.2
Mapoly0103s0044 Marchantia polymorpha HOM05D004174 ORTHO05D004624 2.6e-95 353.2 427 46.4
Lj4A460T58 Lonicera japonica HOM05D004174 ORTHO05D004624 9.3e-93 344.7 234 71.4
Pp3c3_2090 Physcomitrium patens HOM05D004174 ORTHO05D004624 8.8e-91 338.2 396 47.5
SEGI_09002 Sequoiadendron giganteum HOM05D004174 ORTHO05D004624 1.3e-89 334.3 275 57.5
SMO169G0291 Selaginella moellendorffii HOM05D004174 ORTHO05D004624 1.8e-88 330.5 256 60.9
AUR62030487 Chenopodium quinoa HOM05D004174 ORTHO05D004624 1.4e-75 287.7 173 79.8
AUR62011109 Chenopodium quinoa HOM05D004174 ORTHO05D004624 1.8e-72 277.3 197 70.6
BolC2t07007H Brassica oleracea HOM05D004174 ORTHO05D004624 3.2e-61 240.0 202 57.9
SEGI_03330 Sequoiadendron giganteum HOM05D004174 ORTHO05D004624 3.2e-61 240.0 333 41.4
Glyma.05G008302 Glycine max HOM05D004174 ORTHO05D004624 2.1e-60 237.3 164 68.9
Cpa.g.sc648.3 Carica papaya HOM05D004174 ORTHO05D004624 1.0e-54 218.4 163 64.4
AUR62011090 Chenopodium quinoa HOM05D003948 ORTHO05D004610 1.8e-51 207.6 165 61.2
Cc11_g15180 Coffea canephora HOM05D004174 ORTHO05D004624 2.9e-46 190.3 118 80.5
Ah.14g080310 Amaranthus hybridus HOM05D004174 ORTHO05D004624 1.4e-43 181.4 161 56.5
AUR62015314 Chenopodium quinoa HOM05D004174 ORTHO05D004624 8.9e-43 178.7 146 62.3
Cre09.g396900 Chlamydomonas reinhardtii HOM05D004174 ORTHO05D004624 1.7e-41 174.5 228 41.7
Haze_27339 Corylus avellana HOM05D004174 ORTHO05D004624 9.8e-34 148.7 296 35.1
MD02G1035400 Malus domestica HOM05D004174 ORTHO05D004624 1.7e-33 147.9 82 78.0
Cfa023976 Carpinus fangiana HOM05D003934 ORTHO05D005108 1.4e-32 144.8 432 28.2
Pp3c14_12120 Physcomitrium patens HOM05D004174 ORTHO05D004624 1.3e-30 138.3 252 36.9
SEGI_13131 Sequoiadendron giganteum HOM05D004174 ORTHO05D004624 8.6e-30 135.6 297 31.6
Sabra06G0122300 Salix brachista HOM05D004174 ORTHO05D004624 1.5e-29 134.8 232 37.5
MCO10G159 Micromonas commoda HOM05D004174 ORTHO05D004624 3.3e-29 133.7 338 31.1
Lj4C460T3 Lonicera japonica HOM05D004174 ORTHO05D004624 1.1e-27 128.6 76 80.3
Mapoly0019s0154 Marchantia polymorpha HOM05D004174 ORTHO05D004624 4.4e-26 123.2 258 35.3
Ah.12g053390 Amaranthus hybridus HOM05D004174 ORTHO05D004624 7.1e-24 115.9 63 81.0
Ah.12g055680 Amaranthus hybridus HOM05D004174 ORTHO05D004624 2.1e-23 114.4 63 79.4
Ah.05g171270 Amaranthus hybridus HOM05D004174 ORTHO05D004624 3.5e-23 113.6 63 79.4
CBR_g46446 Chara braunii HOM05D004174 ORTHO05D004624 4.3e-21 106.7 120 47.5
PRCOL_00006603 Prasinoderma coloniale HOM05D004174 ORTHO05D004624 1.1e-19 102.1 141 37.6
VMungo0647G2130 Vigna mungo HOM05D004174 ORTHO05D004624 2.7e-15 87.4 146 35.6
Psat3g000160 Pisum sativum HOM05D004174 ORTHO05D004624 4.3e-13 80.1 92 45.7
Cre13.g582476 Chlamydomonas reinhardtii HOM05D004174 ORTHO05D004624 5.6e-13 79.7 170 31.8
SMO141G0190 Selaginella moellendorffii HOM05D004174 ORTHO05D004624 5.3e-11 73.2 119 39.5
Ah.12g053410 Amaranthus hybridus HOM05D004174 ORTHO05D004624 1.1e-08 65.5 38 73.7
VMungo1215G0447 Vigna mungo HOM05D006361 ORTHO05D007824 1.1e-08 65.5 74 40.5
BcaNung04410 Brassica carinata HOM05D005723 ORTHO05D005968 1.0e-06 58.9 193 29.0
BolC2t07012H Brassica oleracea HOM05D004174 ORTHO05D004624 1.7e-06 58.2 37 67.6
A05p02710 Brassica napus HOM05D005723 ORTHO05D005968 5.1e-06 56.6 183 29.0
BcaC01g05310 Brassica carinata HOM05D005723 ORTHO05D005968 6.6e-06 56.2 141 33.3
BolC3t15179H Brassica oleracea HOM05D005723 ORTHO05D005968 6.6e-06 56.2 141 33.3
A03p23560 Brassica napus HOM05D005723 ORTHO05D005968 8.7e-06 55.8 141 33.3
BraA03t11573Z Brassica rapa HOM05D005723 ORTHO05D005968 8.7e-06 55.8 141 33.3
CARHR137150 Cardamine hirsuta HOM05D005723 ORTHO05D005968 8.7e-06 55.8 141 32.6


User provided reference genes

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