Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu058028.1 Olea europaea HOM05D007410 ORTHO05D009500 1.4e-65 255.4 136 100.0
Oeu023854.1 Olea europaea HOM05D007410 ORTHO05D009500 1.5e-51 208.8 139 81.3
Migut.J00989 Erythranthe guttata HOM05D007410 ORTHO05D009500 1.5e-38 165.6 128 68.0
Nitab4.5_0026813g0010 Nicotiana tabacum HOM05D007410 ORTHO05D009500 9.8e-35 152.9 134 62.7
Nitab4.5_0005621g0120 Nicotiana tabacum HOM05D007410 ORTHO05D009500 1.1e-33 149.4 134 61.9
Nitab4.5_0001290g0100 Nicotiana tabacum HOM05D007410 ORTHO05D009500 5.4e-33 147.1 134 60.4
Peaxi162Scf00802g00013 Petunia axillaris HOM05D007410 ORTHO05D009500 1.2e-32 146.0 136 57.4
Cc06_g05130 Coffea canephora HOM05D007410 ORTHO05D009500 1.6e-32 145.6 125 60.8
PGSC0003DMG400004719 Solanum tuberosum HOM05D007410 ORTHO05D009500 7.8e-32 143.3 134 58.2
Sopen12g034470 Solanum pennellii HOM05D007410 ORTHO05D009500 1.0e-31 142.9 132 59.1
Solyc12g099840.1 Solanum lycopersicum HOM05D007410 ORTHO05D009500 4.3e-30 137.5 132 56.8
SGA_v2.0_scaffold75G24801 Striga asiatica HOM05D007410 ORTHO05D009500 9.5e-30 136.3 133 53.4
Dinv34010 Davidia involucrata HOM05D007410 ORTHO05D009500 1.2e-29 136.0 127 61.4
MD12G1016300 Malus domestica HOM05D007410 ORTHO05D009500 4.4e-27 127.5 141 51.8
TWI60G0552 Tripterygium wilfordii HOM05D007410 ORTHO05D009500 4.4e-27 127.5 139 52.5
MD14G1014400 Malus domestica HOM05D007410 ORTHO05D009500 1.3e-26 125.9 141 51.1
SGA_v2.0_scaffold40G15416 Striga asiatica HOM05D007410 ORTHO05D009500 2.2e-26 125.2 126 53.2
FAN02G1401 Fragaria x ananassa HOM05D007410 ORTHO05D009500 3.7e-26 124.4 141 52.5
DCAR_020784 Daucus carota HOM05D007410 ORTHO05D009500 3.2e-25 121.3 139 50.4
FAN14G2442 Fragaria x ananassa HOM05D007410 ORTHO05D009500 3.2e-25 121.3 141 51.8
HanXRQChr17g0534281 Helianthus annuus HOM05D007410 ORTHO05D009500 4.1e-25 120.9 135 46.7
RcHm_v2.0_Chr3g0471971 Rosa chinensis HOM05D007410 ORTHO05D009500 5.4e-25 120.6 141 50.4
Prupe.7G119000 Prunus persica HOM05D007410 ORTHO05D009500 7.0e-25 120.2 141 47.5
FvH4_6g17750 Fragaria vesca HOM05D007410 ORTHO05D009500 9.2e-25 119.8 141 51.1
Hma1.2p1_0084F.1_g043130 Hydrangea macrophylla HOM05D007410 ORTHO05D009500 9.2e-25 119.8 122 57.4
QL02p025248 Quercus lobata HOM05D007410 ORTHO05D009500 1.2e-24 119.4 128 50.0
Eucgr.A01557 Eucalyptus grandis HOM05D007410 ORTHO05D009500 3.5e-24 117.9 139 48.9
HanXRQChr17g0535541 Helianthus annuus HOM05D007410 ORTHO05D009500 6.0e-24 117.1 134 47.0
Atru.BG.129.p Acer truncatum HOM05D007410 ORTHO05D009500 1.0e-23 116.3 127 52.0
FAN09G1720 Fragaria x ananassa HOM05D007410 ORTHO05D009500 1.3e-23 115.9 141 50.4
Haze_19526 Corylus avellana HOM05D007410 ORTHO05D009500 3.0e-23 114.8 139 43.9
Cfa016527 Carpinus fangiana HOM05D007410 ORTHO05D009500 3.3e-22 111.3 139 42.4
DCAR_013956 Daucus carota HOM05D007410 ORTHO05D009500 1.6e-21 109.0 139 47.5
Rhsim03G0082200 Rhododendron simsii HOM05D007410 ORTHO05D009500 1.6e-21 109.0 118 51.7
CAN.G575.91 Capsicum annuum HOM05D007410 ORTHO05D009500 2.8e-21 108.2 134 44.8
FAN05G1927 Fragaria x ananassa HOM05D007410 ORTHO05D009500 3.6e-21 107.8 141 48.2
TAR365G0607 Trochodendron aralioides HOM05D007410 ORTHO05D009500 6.8e-20 103.6 114 50.9
VMungo1383G0444 Vigna mungo HOM05D007410 ORTHO05D009500 2.0e-19 102.1 133 47.4
Phvul.001G185900 Phaseolus vulgaris HOM05D007410 ORTHO05D009500 1.3e-18 99.4 135 45.9
Atru.chr12.1036 Acer truncatum HOM05D007410 ORTHO05D009500 8.3e-18 96.7 83 55.4
Dinv39608 Davidia involucrata HOM05D007410 ORTHO05D009500 8.3e-18 96.7 174 59.2
Aqoxy1G00955 Aquilegia oxysepala HOM05D007410 ORTHO05D009500 1.4e-17 95.9 140 39.3
MELO3C006839.2 Cucumis melo HOM05D007410 ORTHO05D009500 4.1e-17 94.4 139 38.8
CsaV3_3G016400 Cucumis sativus L. HOM05D007410 ORTHO05D009500 1.2e-16 92.8 140 40.0
Aa31LG3G15130 Aethionema arabicum HOM05D007410 ORTHO05D009500 2.1e-16 92.0 140 37.9
Glyma.03G190300 Glycine max HOM05D007410 ORTHO05D009500 2.1e-16 92.0 128 42.2
AUR62013683 Chenopodium quinoa HOM05D007410 ORTHO05D009500 1.0e-15 89.7 123 42.3
ClCG05G007520 Citrullus lanatus HOM05D007410 ORTHO05D009500 1.3e-15 89.4 135 37.0
CSS0026121 Camellia sinensis var. sinensis HOM05D007410 ORTHO05D009500 3.9e-15 87.8 178 59.0
Carub.0006s1061 Capsella rubella HOM05D007410 ORTHO05D009500 3.9e-15 87.8 137 40.9
Potri.010G249800 Populus trichocarpa HOM05D007410 ORTHO05D009500 3.9e-15 87.8 141 37.6
Sc18g0006010 Simmondsia chinensis HOM05D007410 ORTHO05D009500 6.6e-15 87.0 124 41.9
EL10Ac1g00861 Beta vulgaris HOM05D007410 ORTHO05D009500 8.6e-15 86.7 127 42.5
AT5G12100 Arabidopsis thaliana HOM05D007410 ORTHO05D009500 1.1e-14 86.3 136 40.4
AUR62004183 Chenopodium quinoa HOM05D007410 ORTHO05D009500 2.5e-14 85.1 124 40.3
Actinidia39878 Actinidia chinensis HOM05D007410 ORTHO05D009500 3.3e-14 84.7 57 68.4
Lj9E304T4 Lonicera japonica HOM05D007410 ORTHO05D009500 4.3e-14 84.3 114 42.1
PGR004G1775 Punica granatum HOM05D007410 ORTHO05D009500 7.3e-14 83.6 118 43.2
Glyma.19G190667 Glycine max HOM05D007410 ORTHO05D009500 1.2e-13 82.8 116 44.0
CARHR201020 Cardamine hirsuta HOM05D007410 ORTHO05D009500 3.6e-13 81.3 132 37.1
Sp6g31520 Schrenkiella parvula HOM05D007410 ORTHO05D009500 3.6e-13 81.3 138 37.0
Nn8g39918 Nelumbo nucifera HOM05D007410 ORTHO05D009500 1.4e-12 79.3 121 39.7
BraA10t44635Z Brassica rapa HOM05D007410 ORTHO05D009500 3.1e-12 78.2 138 37.7
A10p25700 Brassica napus HOM05D007410 ORTHO05D009500 4.0e-12 77.8 138 37.0
CDE01G0670 Ceratophyllum demersum HOM05D003192 ORTHO05D003596 4.0e-12 77.8 146 37.0
BolC9t59308H Brassica oleracea HOM05D007410 ORTHO05D009500 1.5e-11 75.9 138 36.2
Atru.chr12.1030 Acer truncatum HOM05D007410 ORTHO05D009500 2.0e-11 75.5 92 48.9
Migut.A01169 Erythranthe guttata HOM05D007410 ORTHO05D009500 2.6e-11 75.1 169 74.6
Lj1g0017625 Lotus japonicus HOM05D007410 ORTHO05D009500 2.6e-11 75.1 108 40.7
Gohir.A01G210000 Gossypium hirsutum HOM05D007410 ORTHO05D009500 3.4e-11 74.7 99 44.4
Cpa.g.sc117.70 Carica papaya HOM05D007410 ORTHO05D009500 4.4e-11 74.3 176 70.5
Sed0018174 Sechium edule HOM05D007410 ORTHO05D009500 4.4e-11 74.3 139 36.0
Gohir.D01G198900 Gossypium hirsutum HOM05D007410 ORTHO05D009500 1.7e-10 72.4 97 44.3
Gorai.002G243300 Gossypium raimondii HOM05D007410 ORTHO05D009500 1.7e-10 72.4 97 44.3
Psat2g007640 Pisum sativum HOM05D007410 ORTHO05D009500 1.7e-10 72.4 136 35.3
C09p64770 Brassica napus HOM05D007410 ORTHO05D009500 2.9e-10 71.6 138 34.8
Duzib093G0520 Durio zibethinus HOM05D007410 ORTHO05D009500 4.9e-10 70.9 174 59.8
Lalb_Chr01g0018371 Lupinus albus HOM05D007410 ORTHO05D009500 4.9e-10 70.9 135 37.8
Ciclev10033972m.g Citrus clementina HOM05D007410 ORTHO05D009500 1.9e-09 68.9 177 76.3
BcaNung06328 Brassica carinata HOM05D007410 ORTHO05D009500 7.1e-09 67.0 139 36.0
CANSAT80G0494 Cannabis sativa HOM05D007410 ORTHO05D009500 2.1e-08 65.5 103 41.7
Thhalv10015810m.g Eutrema salsugineum HOM05D007410 ORTHO05D009500 6.0e-08 63.9 81 38.3
SHI27720 Sapria himalayana HOM05D007410 ORTHO05D009500 6.0e-08 63.9 98 44.9
Medtr7g103600 Medicago truncatula HOM05D007410 ORTHO05D009500 2.3e-07 62.0 130 32.3
AL6G44470 Arabidopsis lyrata HOM05D007410 ORTHO05D009500 6.6e-07 60.5 67 43.3
CiPaw.09G007900 Carya illinoinensis HOM05D007410 ORTHO05D009500 1.9e-06 58.9 80 45.0
Lj9P304T66 Lonicera japonica HOM05D007410 ORTHO05D009500 1.9e-06 58.9 170 72.9
Manes.09G058000 Manihot esculenta HOM05D007410 ORTHO05D009500 3.3e-06 58.2 174 55.2
Thecc.05G080100 Theobroma cacao HOM05D007410 ORTHO05D009500 4.3e-06 57.8 49 51.0
FAN09G0790 Fragaria x ananassa HOM05D007410 ORTHO05D009500 7.3e-06 57.0 174 54.6


User provided reference genes

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