Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu058021.1 Olea europaea HOM05D005622 ORTHO05D002854 2.2e-38 161.8 79 100.0
Oeu004580.1 Olea europaea HOM05D005622 ORTHO05D002854 2.1e-20 102.1 54 88.9
MSTRG.13447 Avicennia marina HOM05D005622 ORTHO05D002854 1.1e-18 96.3 54 81.5
CSS0009290 Camellia sinensis var. sinensis HOM05D005622 ORTHO05D002854 1.5e-18 95.9 54 79.6
Cc11_g12130 Coffea canephora HOM05D005622 ORTHO05D002854 1.3e-17 92.8 54 77.8
HanXRQChr12g0375311 Helianthus annuus HOM05D005622 ORTHO05D002854 2.1e-17 92.0 54 74.1
Lsat_1_v5_gn_3_56000 Lactuca sativa HOM05D005622 ORTHO05D002854 4.8e-17 90.9 54 72.2
Rhsim12G0135600 Rhododendron simsii HOM05D005622 ORTHO05D002854 1.1e-16 89.7 54 74.1
ECA246G3879 Erigeron canadensis HOM05D005622 ORTHO05D002854 1.8e-16 89.0 52 75.0
Haze_12341 Corylus avellana HOM05D005622 ORTHO05D002854 2.4e-16 88.6 54 72.2
Ah.06g194230 Amaranthus hybridus HOM05D005622 ORTHO05D002854 3.1e-16 88.2 67 59.7
Ah.16g102020 Amaranthus hybridus HOM05D005622 ORTHO05D002854 3.1e-16 88.2 67 59.7
Sc04g0007650 Simmondsia chinensis HOM05D005622 ORTHO05D002854 3.1e-16 88.2 53 73.6
Medtr5g044120 Medicago truncatula HOM05D005622 ORTHO05D002854 4.0e-16 87.8 54 72.2
Lj2g0008256 Lotus japonicus HOM05D005622 ORTHO05D002854 9.0e-16 86.7 54 72.2
PGSC0003DMG400037705 Solanum tuberosum HOM05D005622 ORTHO05D002854 9.0e-16 86.7 51 72.5
CAN.G497.86 Capsicum annuum HOM05D005622 ORTHO05D002854 1.2e-15 86.3 54 70.4
AT1G26500 Arabidopsis thaliana HOM05D005622 ORTHO05D002854 1.5e-15 85.9 53 71.7
Migut.E00052 Erythranthe guttata HOM05D005622 ORTHO05D002854 1.5e-15 85.9 54 72.2
BraA09t39490Z Brassica rapa HOM05D005622 ORTHO05D002854 2.0e-15 85.5 53 71.7
Ciclev10033964m.g Citrus clementina HOM05D005622 ORTHO05D002854 2.0e-15 85.5 54 68.5
BcaB02g08903 Brassica carinata HOM05D005622 ORTHO05D002854 2.6e-15 85.1 55 67.3
AUR62000117 Chenopodium quinoa HOM05D001669 ORTHO05D002854 3.4e-15 84.7 53 71.7
AUR62019298 Chenopodium quinoa HOM05D005622 ORTHO05D002854 3.4e-15 84.7 53 71.7
Ca_19328_v3 Cicer arietinum L. HOM05D005622 ORTHO05D002854 3.4e-15 84.7 54 68.5
Gohir.D03G178400 Gossypium hirsutum HOM05D005622 ORTHO05D002854 3.4e-15 84.7 58 63.8
Gohir.D05G389201 Gossypium hirsutum HOM05D005622 ORTHO05D002854 3.4e-15 84.7 53 69.8
Gohir.D09G168800 Gossypium hirsutum HOM05D005622 ORTHO05D002854 3.4e-15 84.7 53 69.8
Gohir.D10G255600 Gossypium hirsutum HOM05D005622 ORTHO05D002854 3.4e-15 84.7 53 69.8
Gorai.006G190400 Gossypium raimondii HOM05D005622 ORTHO05D002854 3.4e-15 84.7 53 69.8
Gorai.009G455800 Gossypium raimondii HOM05D005622 ORTHO05D002854 3.4e-15 84.7 53 69.8
CiPaw.13G042800 Carya illinoinensis HOM05D005622 ORTHO05D002854 4.5e-15 84.3 51 72.5
Ca_04951_v3 Cicer arietinum L. HOM05D005622 ORTHO05D002854 4.5e-15 84.3 54 68.5
CsaV3_6G032540 Cucumis sativus L. HOM05D005622 ORTHO05D002854 5.8e-15 84.0 54 68.5
CsaV3_6G033620 Cucumis sativus L. HOM05D005622 ORTHO05D002854 5.8e-15 84.0 54 68.5
Atru.chr11.1653 Acer truncatum HOM05D005622 ORTHO05D002854 7.6e-15 83.6 54 66.7
A09p39910 Brassica napus HOM05D005622 ORTHO05D002854 7.6e-15 83.6 53 69.8
C05p24510 Brassica napus HOM05D005622 ORTHO05D002854 7.6e-15 83.6 53 69.8
BolC5t31185H Brassica oleracea HOM05D005622 ORTHO05D002854 7.6e-15 83.6 53 69.8
Nitab4.5_0000014g0340 Nicotiana tabacum HOM05D005622 ORTHO05D002854 7.6e-15 83.6 54 66.7
Nitab4.5_0007438g0010 Nicotiana tabacum HOM05D005622 ORTHO05D002854 7.6e-15 83.6 54 66.7
Sopen04g001420 Solanum pennellii HOM05D005622 ORTHO05D002854 7.6e-15 83.6 51 70.6
Gohir.A09G173100 Gossypium hirsutum HOM05D005622 ORTHO05D002854 9.9e-15 83.2 53 67.9
ClCG08G010340 Citrullus lanatus HOM05D005622 ORTHO05D002854 1.3e-14 82.8 54 66.7
Duzib248G0892 Durio zibethinus HOM05D005622 ORTHO05D002854 1.3e-14 82.8 53 67.9
Phvul.003G043300 Phaseolus vulgaris HOM05D005622 ORTHO05D002854 1.3e-14 82.8 54 68.5
Aa31LG7G8600 Aethionema arabicum HOM05D005622 ORTHO05D002854 1.7e-14 82.4 53 69.8
Gohir.D10G255400 Gossypium hirsutum HOM05D005622 ORTHO05D002854 1.7e-14 82.4 53 69.8
Psat2g129840 Pisum sativum HOM05D005622 ORTHO05D002854 1.7e-14 82.4 54 68.5
MD09G1267500 Malus domestica HOM05D005622 ORTHO05D002854 2.2e-14 82.0 60 61.7
CDE07G1979 Ceratophyllum demersum HOM05D005622 ORTHO05D002854 2.9e-14 81.6 53 66.0
DCAR_027464 Daucus carota HOM05D005622 ORTHO05D002854 2.9e-14 81.6 54 66.7
Thhalv10009723m.g Eutrema salsugineum HOM05D005622 ORTHO05D002854 2.9e-14 81.6 51 74.5
Lj3P1030T40 Lonicera japonica HOM05D005622 ORTHO05D002854 2.9e-14 81.6 54 64.8
Manes.10G007100 Manihot esculenta HOM05D005622 ORTHO05D002854 2.9e-14 81.6 66 60.6
Prupe.1G285700 Prunus persica HOM05D005622 ORTHO05D002854 2.9e-14 81.6 54 68.5
Sp1g22250 Schrenkiella parvula HOM05D005622 ORTHO05D002854 2.9e-14 81.6 53 69.8
Sed0021884 Sechium edule HOM05D005622 ORTHO05D002854 2.9e-14 81.6 54 64.8
MELO3C011426.2 Cucumis melo HOM05D005622 ORTHO05D002854 3.8e-14 81.3 54 64.8
Thecc.02G332900 Theobroma cacao HOM05D005622 ORTHO05D002854 3.8e-14 81.3 53 67.9
CARHR025470 Cardamine hirsuta HOM05D005622 ORTHO05D002854 4.9e-14 80.9 53 67.9
Glyma.01G057600 Glycine max HOM05D005622 ORTHO05D002854 4.9e-14 80.9 54 66.7
SGA_v2.0_scaffold63G21630 Striga asiatica HOM05D005622 ORTHO05D002854 4.9e-14 80.9 54 68.5
Lalb_Chr10g0098711 Lupinus albus HOM05D005622 ORTHO05D002854 8.4e-14 80.1 54 64.8
SalBow8G5094 Salvia bowleyana HOM05D005622 ORTHO05D002854 8.4e-14 80.1 47 76.6
TAR629G1135 Trochodendron aralioides HOM05D005622 ORTHO05D002854 8.4e-14 80.1 70 54.3
CANSAT80G0227 Cannabis sativa HOM05D005622 ORTHO05D002854 1.1e-13 79.7 50 70.0
COL.COLO4_27901 Corchorus olitorius HOM05D005622 ORTHO05D002854 1.1e-13 79.7 50 70.0
GSVIVG01012216001 Vitis vinifera HOM05D005622 ORTHO05D002854 1.1e-13 79.7 54 68.5
RcHm_v2.0_Chr4g0438541 Rosa chinensis HOM05D005622 ORTHO05D002854 1.4e-13 79.3 51 68.6
THA.LOC104808568 Tarenaya hassleriana HOM05D005622 ORTHO05D002854 1.4e-13 79.3 53 67.9
VMungo1215G2844 Vigna mungo HOM05D005622 ORTHO05D002854 1.4e-13 79.3 54 64.8
Psat3g141440 Pisum sativum HOM05D005622 ORTHO05D002854 1.9e-13 79.0 54 66.7
AL1G39240 Arabidopsis lyrata HOM05D005622 ORTHO05D002854 3.2e-13 78.2 53 67.9
Carub.0001s2452 Capsella rubella HOM05D005622 ORTHO05D002854 3.2e-13 78.2 53 66.0
Aqoxy3G03617 Aquilegia oxysepala HOM05D005622 ORTHO05D002854 4.2e-13 77.8 54 64.8
SGA_v2.0_scaffold32G13359 Striga asiatica HOM05D005622 ORTHO05D002854 4.2e-13 77.8 54 66.7
FvH4_4g30220 Fragaria vesca HOM05D005622 ORTHO05D002854 5.4e-13 77.4 56 60.7
Glyma.02G115700 Glycine max HOM05D005622 ORTHO05D002854 5.4e-13 77.4 54 64.8
QL03p000909 Quercus lobata HOM05D005622 ORTHO05D002854 5.4e-13 77.4 53 64.2
FAN12G0629 Fragaria x ananassa HOM05D005622 ORTHO05D002854 7.1e-13 77.0 51 66.7
QL03p001266 Quercus lobata HOM05D005622 ORTHO05D002854 7.1e-13 77.0 53 64.2
TWI79G0708 Tripterygium wilfordii HOM05D005622 ORTHO05D002854 7.1e-13 77.0 53 64.2
Eucgr.B03161 Eucalyptus grandis HOM05D005622 ORTHO05D002854 1.2e-12 76.3 53 60.4
FAN07G1209 Fragaria x ananassa HOM05D005622 ORTHO05D002854 1.2e-12 76.3 48 68.8
QL11p046082 Quercus lobata HOM05D005622 ORTHO05D002854 1.2e-12 76.3 51 66.7
FAN22G2146 Fragaria x ananassa HOM05D005622 ORTHO05D002854 1.6e-12 75.9 48 68.8
Potri.016G086100 Populus trichocarpa HOM05D005622 ORTHO05D002854 4.6e-12 74.3 71 50.7
FAN17G0216 Fragaria x ananassa HOM05D005622 ORTHO05D002854 6.0e-12 73.9 48 66.7
Zm00001eb326760 Zea mays HOM05D005622 ORTHO05D002854 1.0e-11 73.2 47 66.0
Sabra16G0092400 Salix brachista HOM05D005622 ORTHO05D002854 1.8e-11 72.4 53 58.5
SHI08443 Sapria himalayana HOM05D005622 ORTHO05D002854 2.3e-11 72.0 53 62.3
Nn2g11925 Nelumbo nucifera HOM05D005622 ORTHO05D002854 3.0e-11 71.6 54 61.1
Nn4g23403 Nelumbo nucifera HOM05D005622 ORTHO05D002854 3.0e-11 71.6 54 61.1
PGR102G2037 Punica granatum HOM05D005622 ORTHO05D002854 3.9e-11 71.2 50 58.0
ATR0064G072 Amborella trichopoda HOM05D005622 ORTHO05D002854 6.7e-11 70.5 54 57.4
Os07g0599201 Oryza sativa ssp. japonica HOM05D005622 ORTHO05D002854 4.8e-09 64.3 47 59.6
HPP92_009556 Vanilla planifolia HOM05D005622 ORTHO05D002854 8.1e-09 63.5 53 52.8
EL10Ac4g10254 Beta vulgaris HOM05D005622 ORTHO05D002854 1.1e-08 63.2 37 73.0
EL10Ac4g10271 Beta vulgaris HOM05D005622 ORTHO05D002854 1.1e-08 63.2 37 73.0
HPP92_009525 Vanilla planifolia HOM05D005622 ORTHO05D002854 1.1e-08 63.2 53 52.8


User provided reference genes

Program Settings