Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu058016.1 Olea europaea HOM05D005847 ORTHO05D007143 8.5e-274 946.4 491 100.0
SGA_v2.0_scaffold159G37696 Striga asiatica HOM05D005847 ORTHO05D007143 3.4e-145 519.2 505 58.0
Sopen08g031110 Solanum pennellii HOM05D005847 ORTHO05D007143 1.5e-140 503.8 508 55.7
Solyc08g082880.4 Solanum lycopersicum HOM05D005847 ORTHO05D007143 4.3e-140 502.3 508 55.7
Actinidia22190 Actinidia chinensis HOM05D005847 ORTHO05D007143 1.6e-139 500.4 504 56.7
Peaxi162Scf00074g00363 Petunia axillaris HOM05D005847 ORTHO05D007143 1.6e-139 500.4 503 56.1
Migut.E00656 Erythranthe guttata HOM05D005847 ORTHO05D007143 3.4e-137 492.7 544 52.8
Lj2A159T44 Lonicera japonica HOM05D005847 ORTHO05D007143 1.3e-136 490.7 512 55.9
Cc08_g16520 Coffea canephora HOM05D005847 ORTHO05D007143 1.9e-135 486.9 509 53.8
CAN.G567.67 Capsicum annuum HOM05D005847 ORTHO05D007143 9.2e-135 484.6 507 54.4
PGSC0003DMG400012250 Solanum tuberosum HOM05D005847 ORTHO05D007143 4.3e-132 475.7 525 52.4
Nn8g41240 Nelumbo nucifera HOM05D005847 ORTHO05D007143 2.7e-126 456.4 508 52.4
Duzib084G0923 Durio zibethinus HOM05D005847 ORTHO05D007143 1.0e-125 454.5 514 52.9
TAR629G2252 Trochodendron aralioides HOM05D005847 ORTHO05D007143 2.8e-123 446.4 516 51.4
Gohir.A12G238500 Gossypium hirsutum HOM05D005847 ORTHO05D007143 3.6e-123 446.0 518 51.0
GSVIVG01019613001 Vitis vinifera HOM05D005847 ORTHO05D007143 4.7e-123 445.7 500 53.6
Manes.01G053800 Manihot esculenta HOM05D005847 ORTHO05D007143 8.1e-123 444.9 510 51.0
Gohir.D12G239600 Gossypium hirsutum HOM05D005847 ORTHO05D007143 1.8e-122 443.7 517 49.5
Aqoxy5G04298 Aquilegia oxysepala HOM05D005847 ORTHO05D007143 3.1e-122 443.0 524 48.7
Thecc.03G224700 Theobroma cacao HOM05D005847 ORTHO05D007143 3.1e-122 443.0 523 50.5
DCAR_006499 Daucus carota HOM05D005847 ORTHO05D007143 4.0e-122 442.6 515 49.1
Gorai.008G256700 Gossypium raimondii HOM05D005847 ORTHO05D007143 4.0e-122 442.6 517 49.3
MBI12_g02092_MAGBIO Magnolia biondii HOM05D005847 ORTHO05D007143 8.9e-122 441.4 514 49.8
Prupe.5G126500 Prunus persica HOM05D005847 ORTHO05D007143 1.5e-121 440.7 500 51.6
MD06G1113800 Malus domestica HOM05D005847 ORTHO05D007143 4.4e-121 439.1 496 52.2
MD14G1134800 Malus domestica HOM05D005847 ORTHO05D007143 5.8e-121 438.7 498 51.6
Ca_24013_v3 Cicer arietinum L. HOM05D005847 ORTHO05D007143 9.9e-121 438.0 506 51.4
FAN08G0147 Fragaria x ananassa HOM05D005847 ORTHO05D007143 1.3e-120 437.6 501 51.5
HanXRQChr13g0415001 Helianthus annuus HOM05D005847 ORTHO05D007143 1.3e-120 437.6 510 49.0
Atru.chr9.1922 Acer truncatum HOM05D005847 ORTHO05D007143 1.7e-120 437.2 516 49.0
FvH4_5g11440 Fragaria vesca HOM05D005847 ORTHO05D007143 1.7e-120 437.2 502 52.0
PGR042G1950 Punica granatum HOM05D005847 ORTHO05D007143 4.9e-120 435.6 496 52.8
QL10p008953 Quercus lobata HOM05D005847 ORTHO05D007143 1.1e-119 434.5 505 50.7
FAN13G1107 Fragaria x ananassa HOM05D005847 ORTHO05D007143 1.9e-119 433.7 501 51.5
Aqoxy3G00691 Aquilegia oxysepala HOM05D005847 ORTHO05D007143 3.2e-119 433.0 530 49.2
EL10Ac5g12470 Beta vulgaris HOM05D005847 ORTHO05D007143 4.1e-119 432.6 503 48.7
Sc01g0010500 Simmondsia chinensis HOM05D005847 ORTHO05D007143 7.1e-119 431.8 513 48.9
TWI81G0154 Tripterygium wilfordii HOM05D005847 ORTHO05D007143 9.2e-119 431.4 510 51.0
FAN18G1068 Fragaria x ananassa HOM05D005847 ORTHO05D007143 1.2e-118 431.0 502 51.0
FAN04G0204 Fragaria x ananassa HOM05D005847 ORTHO05D007143 1.6e-118 430.6 501 50.7
VMungo1127G1163 Vigna mungo HOM05D005847 ORTHO05D007143 1.6e-118 430.6 509 47.7
Ciclev10019764m.g Citrus clementina HOM05D005847 ORTHO05D007143 3.5e-118 429.5 513 49.7
Phvul.011G200000 Phaseolus vulgaris HOM05D005847 ORTHO05D007143 4.6e-118 429.1 511 48.1
Psat4g194080 Pisum sativum HOM05D005847 ORTHO05D007143 6.0e-118 428.7 497 50.7
TPR.G8535 Trifolium pratense HOM05D005847 ORTHO05D007143 6.0e-118 428.7 489 52.1
Hund18289 Selenicereus undatus HOM05D005847 ORTHO05D007143 7.8e-118 428.3 504 48.8
Cfa011951 Carpinus fangiana HOM05D005847 ORTHO05D007143 1.0e-117 427.9 521 50.1
Lalb_Chr13g0298981 Lupinus albus HOM05D005847 ORTHO05D007143 1.0e-117 427.9 518 49.6
CANSAT21G1860 Cannabis sativa HOM05D005847 ORTHO05D007143 3.0e-117 426.4 504 49.4
Potri.001G086800 Populus trichocarpa HOM05D005847 ORTHO05D007143 3.0e-117 426.4 508 49.6
Haze_09129 Corylus avellana HOM05D005847 ORTHO05D007143 3.9e-117 426.0 522 50.4
Eucgr.E01030 Eucalyptus grandis HOM05D005847 ORTHO05D007143 8.6e-117 424.9 508 48.2
RcHm_v2.0_Chr2g0164461 Rosa chinensis HOM05D005847 ORTHO05D007143 1.5e-116 424.1 504 50.8
CsaV3_5G001820 Cucumis sativus L. HOM05D005847 ORTHO05D007143 1.6e-115 420.6 516 47.5
Medtr8g040700 Medicago truncatula HOM05D005847 ORTHO05D007143 2.8e-115 419.9 512 47.3
ECA240G1801 Erigeron canadensis HOM05D005847 ORTHO05D007143 6.2e-115 418.7 543 44.4
CiPaw.11G115200 Carya illinoinensis HOM05D005847 ORTHO05D007143 8.1e-115 418.3 509 49.5
MELO3C005771.2 Cucumis melo HOM05D005847 ORTHO05D007143 8.1e-115 418.3 516 46.9
Sed0023920 Sechium edule HOM05D005847 ORTHO05D007143 1.4e-114 417.5 526 47.1
Sabra01G0063100 Salix brachista HOM05D005847 ORTHO05D007143 8.9e-114 414.8 494 49.6
Glyma.13G191700 Glycine max HOM05D005847 ORTHO05D007143 2.0e-113 413.7 527 46.1
unitig_21.g20386 Utricularia gibba HOM05D005847 ORTHO05D007143 2.2e-112 410.2 491 49.9
vmacro11522 Vaccinium macrocarpon HOM05D005847 ORTHO05D007143 3.8e-112 409.5 553 48.3
MSTRG.26906 Avicennia marina HOM05D005847 ORTHO05D007143 9.3e-111 404.8 253 81.4
arahy.Tifrunner.gnm1.ann1.PR6ST2 Arachis hypogaea HOM05D005847 ORTHO05D007143 1.2e-110 404.4 445 53.3
THA.LOC104809314 Tarenaya hassleriana HOM05D005847 ORTHO05D007143 1.2e-110 404.4 514 46.9
ClCG01G001660 Citrullus lanatus HOM05D005847 ORTHO05D007143 1.0e-109 401.4 572 43.4
ATR0757G021 Amborella trichopoda HOM05D005847 ORTHO05D007143 1.9e-108 397.1 502 48.8
COL.COLO4_10763 Corchorus olitorius HOM05D005847 ORTHO05D007143 2.5e-108 396.7 514 48.1
Nitab4.5_0002728g0010 Nicotiana tabacum HOM05D005847 ORTHO05D007143 2.5e-108 396.7 299 68.6
arahy.Tifrunner.gnm1.ann1.HI9AVU Arachis hypogaea HOM05D005847 ORTHO05D007143 2.4e-106 390.2 446 51.6
CSS0040838 Camellia sinensis var. sinensis HOM05D005847 ORTHO05D007143 3.1e-106 389.8 299 67.2
Lj1g0001744 Lotus japonicus HOM05D005847 ORTHO05D007143 3.1e-106 389.8 590 42.7
PSO017G1852 Papaver somniferum HOM05D005847 ORTHO05D007143 2.6e-105 386.7 524 43.9
Os07g0297300 Oryza sativa ssp. japonica HOM05D005847 ORTHO05D007143 7.6e-105 385.2 511 44.4
HPP92_003273 Vanilla planifolia HOM05D005847 ORTHO05D007143 8.4e-104 381.7 521 44.3
Zm00001eb021260 Zea mays HOM05D005847 ORTHO05D007143 1.4e-103 380.9 504 46.0
Aa31LG2G1600 Aethionema arabicum HOM05D005847 ORTHO05D007143 7.1e-103 378.6 531 43.3
BraA09t37102Z Brassica rapa HOM05D005847 ORTHO05D007143 8.7e-101 371.7 520 45.4
BcaC04g22588 Brassica carinata HOM05D005847 ORTHO05D007143 1.9e-100 370.5 520 45.2
C09p17640 Brassica napus HOM05D005847 ORTHO05D007143 1.9e-100 370.5 520 45.2
BolC9t54656H Brassica oleracea HOM05D005847 ORTHO05D007143 1.9e-100 370.5 520 45.2
A09p14540 Brassica napus HOM05D005847 ORTHO05D007143 2.5e-100 370.2 520 45.2
AL2G10160 Arabidopsis lyrata HOM05D005847 ORTHO05D007143 4.3e-100 369.4 507 44.8
AT1G64600 Arabidopsis thaliana HOM05D005847 ORTHO05D007143 4.3e-100 369.4 507 44.8
BcaB07g31478 Brassica carinata HOM05D005847 ORTHO05D007143 1.6e-99 367.5 527 44.4
Carub.0002s0014 Capsella rubella HOM05D005847 ORTHO05D007143 4.5e-97 359.4 528 44.5
Sp2g00130 Schrenkiella parvula HOM05D005847 ORTHO05D007143 4.5e-97 359.4 518 43.6
Rhsim02G0249100 Rhododendron simsii HOM05D005847 ORTHO05D007143 7.6e-97 358.6 251 72.5
Thhalv10023366m.g Eutrema salsugineum HOM05D005847 ORTHO05D007143 2.2e-96 357.1 563 41.6
Lsat_1_v5_gn_6_83620 Lactuca sativa HOM05D005847 ORTHO05D007143 6.4e-96 355.5 294 61.9
AUR62007027 Chenopodium quinoa HOM05D005847 ORTHO05D007143 1.2e-94 351.3 488 45.1
Nitab4.5_0002027g0040 Nicotiana tabacum HOM05D005847 ORTHO05D007143 1.1e-92 344.7 450 47.1
RcHm_v2.0_Chr7g0186411 Rosa chinensis HOM05D005847 ORTHO05D007143 1.5e-92 344.4 241 70.1
CDE04G1283 Ceratophyllum demersum HOM05D005847 ORTHO05D007143 6.9e-90 335.5 254 66.9
AUR62019890 Chenopodium quinoa HOM05D005847 ORTHO05D007143 1.9e-84 317.4 245 65.7
Cpa.g.sc15.20 Carica papaya HOM05D005847 ORTHO05D007143 5.1e-69 266.2 204 64.7
Nn1g00324 Nelumbo nucifera HOM05D005847 ORTHO05D007143 4.2e-63 246.5 222 60.4
Mapoly0031s0174 Marchantia polymorpha HOM05D005847 ORTHO05D007143 2.8e-59 233.8 512 32.4
SHI06935 Sapria himalayana HOM05D005847 ORTHO05D007143 6.3e-59 232.6 441 39.5
Nitab4.5_0006880g0020 Nicotiana tabacum HOM05D005847 ORTHO05D007143 2.9e-56 223.8 469 37.5
Pp3c9_6890 Physcomitrium patens HOM05D005847 ORTHO05D007143 2.9e-56 223.8 522 32.2
Aqoxy5G04303 Aquilegia oxysepala HOM05D005847 ORTHO05D007143 5.7e-52 209.5 203 57.6
SMO119G0297 Selaginella moellendorffii HOM05D005847 ORTHO05D007143 9.7e-52 208.8 549 31.7
Ah.12g052990 Amaranthus hybridus HOM05D005847 ORTHO05D007143 2.7e-41 174.1 469 30.7
SMO115G0010 Selaginella moellendorffii HOM05D005847 ORTHO05D007143 5.7e-36 156.4 146 49.3
MSTRG.15574 Avicennia marina HOM05D005847 ORTHO05D007143 2.8e-35 154.1 126 62.7
SMO116G0437 Selaginella moellendorffii HOM05D005847 ORTHO05D007143 1.0e-29 135.6 239 32.6
CBR_g978 Chara braunii HOM05D005847 ORTHO05D007143 4.9e-27 126.7 166 41.0
QL10p010267 Quercus lobata HOM05D005847 ORTHO05D007143 9.2e-26 122.5 106 59.4
Cpa.g.c33268 Carica papaya HOM05D005847 ORTHO05D007143 1.7e-24 118.2 107 55.1
AUR62019891 Chenopodium quinoa HOM05D005847 ORTHO05D007143 5.0e-24 116.7 125 51.2
RcHm_v2.0_Chr7g0205571 Rosa chinensis HOM05D005847 ORTHO05D007143 3.3e-23 114.0 172 43.6
Atru.chr1.1468 Acer truncatum HOM05D005847 ORTHO05D007143 5.6e-23 113.2 101 50.5
RcHm_v2.0_Chr7g0186431 Rosa chinensis HOM05D005847 ORTHO05D007143 7.3e-23 112.8 116 54.3
SEGI_09534 Sequoiadendron giganteum HOM05D005847 ORTHO05D007143 3.6e-22 110.5 109 45.9
RcHm_v2.0_Chr7g0205551 Rosa chinensis HOM05D005847 ORTHO05D007143 1.0e-21 109.0 180 41.7
CDE04G2319 Ceratophyllum demersum HOM05D005847 ORTHO05D007143 1.5e-20 105.1 118 44.9
Os10g0520950 Oryza sativa ssp. japonica HOM05D005847 ORTHO05D007143 3.4e-20 104.0 121 47.1
CARHR046320 Cardamine hirsuta HOM05D005847 ORTHO05D007143 4.1e-18 97.1 67 56.7
AagrBONN_evm.TU.Sc2ySwM_228.3279 Anthoceros agrestis HOM05D005847 ORTHO05D007143 5.4e-18 96.7 119 42.0
QL02p028460 Quercus lobata HOM05D005847 ORTHO05D007143 6.6e-16 89.7 73 60.3
Lj3g0011757 Lotus japonicus HOM05D005847 ORTHO05D007143 1.8e-13 81.6 176 35.8
Medtr8g040720 Medicago truncatula HOM05D005847 ORTHO05D007143 6.8e-13 79.7 53 60.4
CANSAT54G0404 Cannabis sativa HOM05D000004 ORTHO05D000002 7.1e-10 69.7 61 52.5
Oeu062531.2 Olea europaea HOM05D000531 ORTHO05D001630 8.6e-08 62.8 74 45.9
MCO09G139 Micromonas commoda HOM05D005847 ORTHO05D007143 1.5e-07 62.0 125 30.4
Ah.09g237740 Amaranthus hybridus HOM05D016549 ORTHO05D000002 2.5e-07 61.2 139 30.9
Ciclev10030074m.g Citrus clementina HOM05D000004 ORTHO05D000002 2.5e-07 61.2 105 37.1


User provided reference genes

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