Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu057862.1 Olea europaea HOM05D005604 ORTHO05D006745 5.8e-52 207.2 101 100.0
Migut.D00766 Erythranthe guttata HOM05D005604 ORTHO05D006745 1.2e-33 146.4 84 83.3
MSTRG.18511 Avicennia marina HOM05D005604 ORTHO05D006745 1.6e-33 146.0 84 82.1
Lsat_1_v5_gn_8_89380 Lactuca sativa HOM05D005604 ORTHO05D006745 6.1e-33 144.1 88 81.8
SGA_v2.0_scaffold158G37516 Striga asiatica HOM05D005604 ORTHO05D006745 1.0e-32 143.3 84 81.0
Actinidia30055 Actinidia chinensis HOM05D005604 ORTHO05D006745 1.3e-32 142.9 88 78.4
Actinidia39432 Actinidia chinensis HOM05D005604 ORTHO05D006745 1.3e-32 142.9 88 80.7
Dinv12653 Davidia involucrata HOM05D005604 ORTHO05D006745 1.3e-32 142.9 88 81.8
CSS0000075 Camellia sinensis var. sinensis HOM05D005604 ORTHO05D006745 8.7e-32 140.2 89 79.8
Cc01_g16720 Coffea canephora HOM05D005604 ORTHO05D006745 1.5e-31 139.4 84 79.8
Dinv19175 Davidia involucrata HOM05D005604 ORTHO05D006745 1.5e-31 139.4 88 79.5
Hma1.2p1_0226F.1_g095420 Hydrangea macrophylla HOM05D005604 ORTHO05D006745 7.4e-31 137.1 88 78.4
Lj1A89T69 Lonicera japonica HOM05D005604 ORTHO05D006745 7.4e-31 137.1 90 78.9
vmacro02782 Vaccinium macrocarpon HOM05D005604 ORTHO05D006745 2.2e-30 135.6 86 80.2
DCAR_004740 Daucus carota HOM05D005604 ORTHO05D006745 1.1e-29 133.3 88 73.9
Nitab4.5_0003317g0030 Nicotiana tabacum HOM05D005604 ORTHO05D006745 1.1e-29 133.3 98 70.4
CAN.G1432.2 Capsicum annuum HOM05D005604 ORTHO05D006745 3.1e-29 131.7 79 79.7
CAN.G874.4 Capsicum annuum HOM05D005604 ORTHO05D006745 3.1e-29 131.7 79 79.7
Rhsim13G0047500 Rhododendron simsii HOM05D005604 ORTHO05D006745 5.3e-29 131.0 90 75.6
HanXRQChr04g0108051 Helianthus annuus HOM05D005604 ORTHO05D006745 9.0e-29 130.2 88 73.9
PGSC0003DMG400020164 Solanum tuberosum HOM05D005604 ORTHO05D006745 1.2e-28 129.8 79 78.5
Solyc09g059470.4 Solanum lycopersicum HOM05D005604 ORTHO05D006745 2.0e-28 129.0 84 75.0
Sopen09g022640 Solanum pennellii HOM05D005604 ORTHO05D006745 2.0e-28 129.0 84 75.0
Sopen06g034740 Solanum pennellii HOM05D005604 ORTHO05D006745 3.4e-28 128.3 79 78.5
DCAR_012669 Daucus carota HOM05D005604 ORTHO05D006745 1.3e-27 126.3 88 71.6
Nitab4.5_0009005g0020 Nicotiana tabacum HOM05D005604 ORTHO05D006745 1.7e-27 125.9 79 74.7
PGSC0003DMG400027951 Solanum tuberosum HOM05D005604 ORTHO05D006745 1.7e-27 125.9 84 73.8
Solyc06g083370.3 Solanum lycopersicum HOM05D005604 ORTHO05D006745 2.9e-27 125.2 79 77.2
unitig_60.g25697 Utricularia gibba HOM05D005604 ORTHO05D006745 3.8e-27 124.8 84 71.4
GSVIVG01003930001 Vitis vinifera HOM05D005604 ORTHO05D006745 3.8e-27 124.8 86 72.1
Cpa.g.sc43.114 Carica papaya HOM05D005604 ORTHO05D006745 5.0e-27 124.4 90 70.0
ClCG09G008600 Citrullus lanatus HOM05D005604 ORTHO05D006745 5.0e-27 124.4 87 71.3
THA.LOC104822492 Tarenaya hassleriana HOM05D005604 ORTHO05D006745 6.5e-27 124.0 91 69.2
TAR362G0631 Trochodendron aralioides HOM05D005604 ORTHO05D006745 8.5e-27 123.6 85 71.8
Lsat_1_v5_gn_9_15140 Lactuca sativa HOM05D005604 ORTHO05D006745 1.1e-26 123.2 84 75.0
Eucgr.K02139 Eucalyptus grandis HOM05D005604 ORTHO05D006745 1.4e-26 122.9 86 72.1
Sc05g0001960 Simmondsia chinensis HOM05D005604 ORTHO05D006745 1.4e-26 122.9 97 64.9
unitig_0.g223 Utricularia gibba HOM05D005604 ORTHO05D006745 1.4e-26 122.9 84 72.6
Ciclev10019544m.g Citrus clementina HOM05D005604 ORTHO05D006745 2.5e-26 122.1 89 71.9
Atru.chr6.1423 Acer truncatum HOM05D005604 ORTHO05D006745 4.2e-26 121.3 84 73.8
Carub.0003s0673 Capsella rubella HOM05D005604 ORTHO05D006745 4.2e-26 121.3 91 64.8
Potri.002G245700 Populus trichocarpa HOM05D005604 ORTHO05D006745 5.5e-26 120.9 89 65.2
TWI36G0921 Tripterygium wilfordii HOM05D005604 ORTHO05D006745 5.5e-26 120.9 84 71.4
MELO3C021083.2 Cucumis melo HOM05D005604 ORTHO05D006745 7.2e-26 120.6 87 70.1
MBI07_g18990_MAGBIO Magnolia biondii HOM05D005604 ORTHO05D006745 9.4e-26 120.2 84 70.2
AL3G18480 Arabidopsis lyrata HOM05D005604 ORTHO05D006745 1.2e-25 119.8 86 65.1
CARHR081860 Cardamine hirsuta HOM05D005604 ORTHO05D006745 1.2e-25 119.8 86 65.1
TWI18G0325 Tripterygium wilfordii HOM05D005604 ORTHO05D006745 1.2e-25 119.8 89 69.7
Ah.15g093490 Amaranthus hybridus HOM05D005604 ORTHO05D006745 1.6e-25 119.4 101 60.4
CsaV3_7G026370 Cucumis sativus L. HOM05D005604 ORTHO05D006745 2.1e-25 119.0 87 70.1
Thhalv10020454m.g Eutrema salsugineum HOM05D005604 ORTHO05D006745 2.1e-25 119.0 86 65.1
THA.LOC104802659 Tarenaya hassleriana HOM05D005604 ORTHO05D006745 2.1e-25 119.0 91 67.0
C05p60150 Brassica napus HOM05D005604 ORTHO05D006745 2.7e-25 118.6 92 63.0
BolC5t34666H Brassica oleracea HOM05D005604 ORTHO05D006745 2.7e-25 118.6 92 63.0
Haze_15255 Corylus avellana HOM05D005604 ORTHO05D006745 2.7e-25 118.6 80 72.5
A05p41000 Brassica napus HOM05D005604 ORTHO05D006745 3.6e-25 118.2 87 64.4
BraA05t22827Z Brassica rapa HOM05D005604 ORTHO05D006745 3.6e-25 118.2 87 64.4
CiPaw.01G050300 Carya illinoinensis HOM05D005604 ORTHO05D006745 3.6e-25 118.2 84 69.0
Nitab4.5_0003020g0080 Nicotiana tabacum HOM05D005604 ORTHO05D006745 4.6e-25 117.9 67 85.1
AUR62001131 Chenopodium quinoa HOM05D005604 ORTHO05D006745 6.1e-25 117.5 101 59.4
PSO017G3308 Papaver somniferum HOM05D005604 ORTHO05D006745 6.1e-25 117.5 80 71.2
PSO063G0087 Papaver somniferum HOM05D005604 ORTHO05D006745 6.1e-25 117.5 80 71.2
Aa31LG5G17790 Aethionema arabicum HOM05D005604 ORTHO05D006745 7.9e-25 117.1 86 64.0
AT3G07210 Arabidopsis thaliana HOM05D005604 ORTHO05D006745 7.9e-25 117.1 86 62.8
Sp3g06160 Schrenkiella parvula HOM05D005604 ORTHO05D006745 7.9e-25 117.1 86 62.8
CiPaw.02G023400 Carya illinoinensis HOM05D005604 ORTHO05D006745 1.0e-24 116.7 84 69.0
Sed0019682 Sechium edule HOM05D005604 ORTHO05D006745 1.0e-24 116.7 85 70.6
Aqoxy2G03983 Aquilegia oxysepala HOM05D005604 ORTHO05D006745 1.4e-24 116.3 85 68.2
AUR62016550 Chenopodium quinoa HOM05D005604 ORTHO05D006745 1.4e-24 116.3 101 59.4
MD05G1171800 Malus domestica HOM05D005604 ORTHO05D006745 1.4e-24 116.3 84 69.0
QL09p051278 Quercus lobata HOM05D005604 ORTHO05D006745 1.4e-24 116.3 84 70.2
RcHm_v2.0_Chr6g0284121 Rosa chinensis HOM05D005604 ORTHO05D006745 1.4e-24 116.3 84 69.0
BcaC05g29850 Brassica carinata HOM05D005604 ORTHO05D006745 1.8e-24 115.9 87 63.2
Prupe.8G199200 Prunus persica HOM05D005604 ORTHO05D006745 3.0e-24 115.2 84 69.0
FAN15G1583 Fragaria x ananassa HOM05D005604 ORTHO05D006745 3.9e-24 114.8 84 67.9
Nitab4.5_0000045g0530 Nicotiana tabacum HOM05D005604 ORTHO05D006745 3.9e-24 114.8 76 72.4
Thecc.01G220400 Theobroma cacao HOM05D005604 ORTHO05D006745 3.9e-24 114.8 85 68.2
MD10G1160100 Malus domestica HOM05D005604 ORTHO05D006745 5.1e-24 114.4 84 69.0
Manes.12G047141 Manihot esculenta HOM05D005604 ORTHO05D006745 5.1e-24 114.4 85 67.1
Hund05575 Selenicereus undatus HOM05D005604 ORTHO05D006745 5.1e-24 114.4 95 63.2
BcaC05g29746 Brassica carinata HOM05D005604 ORTHO05D006745 6.7e-24 114.0 86 61.6
COL.COLO4_15621 Corchorus olitorius HOM05D005604 ORTHO05D006745 1.1e-23 113.2 90 64.4
FvH4_2g18560 Fragaria vesca HOM05D005604 ORTHO05D006745 1.1e-23 113.2 84 66.7
FAN24G1841 Fragaria x ananassa HOM05D005604 ORTHO05D006745 1.1e-23 113.2 84 66.7
FAN27G1924 Fragaria x ananassa HOM05D005604 ORTHO05D006745 1.1e-23 113.2 84 66.7
CANSAT01G1141 Cannabis sativa HOM05D005604 ORTHO05D006745 2.0e-23 112.5 84 66.7
TAR633G2144 Trochodendron aralioides HOM05D005604 ORTHO05D006745 2.0e-23 112.5 85 65.9
arahy.Tifrunner.gnm1.ann1.S4VI32 Arachis hypogaea HOM05D005604 ORTHO05D006745 4.3e-23 111.3 79 67.1
PGR044G1204 Punica granatum HOM05D005604 ORTHO05D006745 5.7e-23 110.9 84 65.5
Duzib133G0023 Durio zibethinus HOM05D005604 ORTHO05D006745 7.4e-23 110.5 85 64.7
Duzib138G1747 Durio zibethinus HOM05D005604 ORTHO05D006745 1.3e-22 109.8 85 64.7
Gohir.A07G199300 Gossypium hirsutum HOM05D005604 ORTHO05D006745 1.3e-22 109.8 85 64.7
Gohir.D07G205700 Gossypium hirsutum HOM05D005604 ORTHO05D006745 1.3e-22 109.8 85 64.7
Gorai.001G231700 Gossypium raimondii HOM05D005604 ORTHO05D006745 1.3e-22 109.8 85 64.7
HanXRQChr10g0279511 Helianthus annuus HOM05D005604 ORTHO05D006745 1.7e-22 109.4 78 70.5
arahy.Tifrunner.gnm1.ann1.6511ZK Arachis hypogaea HOM05D005604 ORTHO05D006745 4.8e-22 107.8 85 64.7
Glyma.18G167400 Glycine max HOM05D005604 ORTHO05D006745 4.8e-22 107.8 86 64.0
VMungo1383G0872 Vigna mungo HOM05D005604 ORTHO05D006745 1.1e-21 106.7 85 62.4
Glyma.08G349100 Glycine max HOM05D005604 ORTHO05D006745 5.3e-21 104.4 90 60.0
Gohir.A05G304001 Gossypium hirsutum HOM05D005604 ORTHO05D006745 1.2e-20 103.2 82 67.1
Lj1g0022594 Lotus japonicus HOM05D005604 ORTHO05D006745 1.2e-20 103.2 85 62.4
TPR.G6487 Trifolium pratense HOM05D005604 ORTHO05D006745 1.5e-20 102.8 83 63.9
Psat3g148680 Pisum sativum HOM05D005604 ORTHO05D006745 2.6e-20 102.1 86 59.3
Hma1.2p1_1324F.1_g275630 Hydrangea macrophylla HOM05D005604 ORTHO05D006745 4.5e-20 101.3 65 73.8
HPP92_011784 Vanilla planifolia HOM05D005604 ORTHO05D006745 1.0e-19 100.1 99 56.6
Medtr7g056243 Medicago truncatula HOM05D005604 ORTHO05D006745 1.3e-19 99.8 87 57.5
ATR0561G172 Amborella trichopoda HOM05D005604 ORTHO05D006745 5.5e-18 94.4 79 59.5
EL10Ac7g17895 Beta vulgaris HOM05D005604 ORTHO05D006745 1.2e-17 93.2 78 62.8
Phvul.008G130900 Phaseolus vulgaris HOM05D005604 ORTHO05D006745 2.7e-17 92.0 75 64.0
Lalb_Chr13g0291101 Lupinus albus HOM05D005604 ORTHO05D006745 8.8e-16 87.0 86 57.0
Zm00001eb143450 Zea mays HOM05D005604 ORTHO05D006745 1.5e-15 86.3 96 55.2
CDE05G2031 Ceratophyllum demersum HOM05D005604 ORTHO05D006745 3.3e-15 85.1 78 55.1
ECA236G4946 Erigeron canadensis HOM05D005604 ORTHO05D006745 1.8e-13 79.3 53 73.6
Nn1g07990 Nelumbo nucifera HOM05D005604 ORTHO05D006745 2.4e-13 79.0 64 62.5
Zm00001eb175070 Zea mays HOM05D005604 ORTHO05D006745 3.5e-12 75.1 93 46.2
ECA247G0587 Erigeron canadensis HOM05D005604 ORTHO05D006745 3.2e-10 68.6 56 64.3
Peaxi162Scf00068g02416 Petunia axillaris HOM05D005604 ORTHO05D006745 6.1e-09 64.3 40 75.0
Os01g0917200 Oryza sativa ssp. japonica HOM05D005604 ORTHO05D006745 6.3e-06 54.3 91 40.7


User provided reference genes

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