Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu057860.1 Olea europaea HOM05D004056 ORTHO05D004894 4.3e-124 448.0 221 100.0
Oeu051533.1 Olea europaea HOM05D004056 ORTHO05D004894 7.9e-78 294.3 203 74.4
MSTRG.18836 Avicennia marina HOM05D004056 ORTHO05D004894 1.7e-75 286.6 203 73.4
SalBow6G2821 Salvia bowleyana HOM05D004056 ORTHO05D004894 1.7e-75 286.6 211 71.6
SalBow6G5583 Salvia bowleyana HOM05D004056 ORTHO05D004894 1.7e-75 286.6 211 71.6
MSTRG.12776 Avicennia marina HOM05D004056 ORTHO05D004894 3.7e-75 285.4 202 70.8
Dinv00576 Davidia involucrata HOM05D004056 ORTHO05D004894 1.2e-73 280.4 209 72.2
Lj1A89T71 Lonicera japonica HOM05D004056 ORTHO05D004894 1.6e-70 270.0 207 68.6
MSTRG.20969 Avicennia marina HOM05D004056 ORTHO05D004894 3.0e-69 265.8 211 67.8
Migut.D02503 Erythranthe guttata HOM05D004056 ORTHO05D004894 1.1e-68 263.8 202 68.3
Cc01_g16690 Coffea canephora HOM05D004056 ORTHO05D004894 2.0e-68 263.1 204 69.6
vmacro14736 Vaccinium macrocarpon HOM05D004056 ORTHO05D004894 2.8e-67 259.2 209 66.5
CAN.G5.40 Capsicum annuum HOM05D004056 ORTHO05D004894 1.1e-66 257.3 212 64.6
Solyc09g059510.3 Solanum lycopersicum HOM05D004056 ORTHO05D004894 2.4e-66 256.1 215 64.2
Dinv12647 Davidia involucrata HOM05D004056 ORTHO05D004894 3.1e-66 255.8 169 78.7
Hma1.2p1_0226F.1_g095370 Hydrangea macrophylla HOM05D004056 ORTHO05D004894 3.1e-66 255.8 209 68.9
SGA_v2.0_scaffold18G08335 Striga asiatica HOM05D004056 ORTHO05D004894 3.1e-66 255.8 211 65.9
Peaxi162Scf00068g00224 Petunia axillaris HOM05D004056 ORTHO05D004894 2.6e-65 252.7 211 64.5
Potri.002G246100 Populus trichocarpa HOM05D004056 ORTHO05D004894 3.5e-65 252.3 208 64.9
Rhsim01G0253300 Rhododendron simsii HOM05D004056 ORTHO05D004894 3.5e-65 252.3 210 65.7
Cfa004161 Carpinus fangiana HOM05D004056 ORTHO05D004894 5.9e-65 251.5 208 64.4
Nitab4.5_0001161g0130 Nicotiana tabacum HOM05D004056 ORTHO05D004894 1.3e-64 250.4 185 71.4
PGSC0003DMG400017485 Solanum tuberosum HOM05D004056 ORTHO05D004894 8.5e-64 247.7 179 70.9
Sabra02G0187400 Salix brachista HOM05D004056 ORTHO05D004894 1.5e-63 246.9 208 63.5
vmacro02784 Vaccinium macrocarpon HOM05D004056 ORTHO05D004894 3.2e-63 245.7 208 63.9
Actinidia39428 Actinidia chinensis HOM05D004056 ORTHO05D004894 4.2e-63 245.4 209 64.6
COL.COLO4_34102 Corchorus olitorius HOM05D004056 ORTHO05D004894 5.5e-63 245.0 209 62.7
Nn1g07984 Nelumbo nucifera HOM05D004056 ORTHO05D004894 7.2e-63 244.6 209 64.6
TWI36G0821 Tripterygium wilfordii HOM05D004056 ORTHO05D004894 1.6e-62 243.4 213 60.1
Actinidia30050 Actinidia chinensis HOM05D004056 ORTHO05D004894 2.1e-62 243.0 209 64.1
Rhsim13G0047900 Rhododendron simsii HOM05D004056 ORTHO05D004894 2.1e-62 243.0 209 61.7
Thecc.01G219700 Theobroma cacao HOM05D004056 ORTHO05D004894 4.7e-62 241.9 209 61.7
TWI18G1219 Tripterygium wilfordii HOM05D004056 ORTHO05D004894 8.0e-62 241.1 212 60.4
Dinv19168 Davidia involucrata HOM05D004056 ORTHO05D004894 1.4e-61 240.4 174 74.1
Nitab4.5_0000045g0550 Nicotiana tabacum HOM05D004056 ORTHO05D004894 1.4e-61 240.4 175 72.0
Duzib133G0422 Durio zibethinus HOM05D004056 ORTHO05D004894 2.3e-61 239.6 208 63.0
CiPaw.01G050800 Carya illinoinensis HOM05D004056 ORTHO05D004894 8.8e-61 237.7 208 60.6
Ciclev10021891m.g Citrus clementina HOM05D004056 ORTHO05D004894 3.3e-60 235.7 223 57.8
Manes.13G049600 Manihot esculenta HOM05D004056 ORTHO05D004894 7.5e-60 234.6 211 60.2
DCAR_012671 Daucus carota HOM05D004056 ORTHO05D004894 2.2e-59 233.0 209 63.2
Sopen09g022670 Solanum pennellii HOM05D004056 ORTHO05D004894 2.2e-59 233.0 189 66.1
Atru.chr6.1427 Acer truncatum HOM05D004056 ORTHO05D004894 2.8e-59 232.6 217 59.4
CiPaw.02G023900 Carya illinoinensis HOM05D004056 ORTHO05D004894 4.8e-59 231.9 207 60.9
Duzib138G1417 Durio zibethinus HOM05D004056 ORTHO05D004894 1.8e-58 229.9 209 60.3
MBI07_g18993_MAGBIO Magnolia biondii HOM05D004056 ORTHO05D004894 1.8e-58 229.9 212 61.3
Cpa.g.sc21.106 Carica papaya HOM05D004056 ORTHO05D004894 4.1e-58 228.8 225 56.9
TAR636G0170 Trochodendron aralioides HOM05D004056 ORTHO05D004894 5.3e-58 228.4 209 61.7
Duzib211G0551 Durio zibethinus HOM05D004056 ORTHO05D004894 7.0e-58 228.0 209 58.4
TAR362G0687 Trochodendron aralioides HOM05D004056 ORTHO05D004894 1.2e-57 227.3 209 60.3
Gorai.001G188300 Gossypium raimondii HOM05D004056 ORTHO05D004894 1.6e-57 226.9 210 60.0
Migut.N00633 Erythranthe guttata HOM05D004056 ORTHO05D004894 2.7e-57 226.1 210 60.0
Gohir.D07G164400 Gossypium hirsutum HOM05D004056 ORTHO05D004894 5.0e-56 221.9 210 58.6
Gohir.A07G093100 Gossypium hirsutum HOM05D004056 ORTHO05D004894 8.5e-56 221.1 207 57.0
Haze_15250 Corylus avellana HOM05D004056 ORTHO05D004894 1.1e-55 220.7 290 46.9
Eucgr.K02136 Eucalyptus grandis HOM05D004056 ORTHO05D004894 2.5e-55 219.5 203 58.6
TAR365G1100 Trochodendron aralioides HOM05D004056 ORTHO05D004894 2.5e-55 219.5 215 57.7
Gohir.A07G198800 Gossypium hirsutum HOM05D004056 ORTHO05D004894 4.2e-55 218.8 186 64.5
Gohir.D07G205300 Gossypium hirsutum HOM05D004056 ORTHO05D004894 4.2e-55 218.8 186 64.5
Gorai.001G231300 Gossypium raimondii HOM05D004056 ORTHO05D004894 4.2e-55 218.8 186 64.5
Prupe.8G198700 Prunus persica HOM05D004056 ORTHO05D004894 4.2e-55 218.8 209 58.4
Gorai.007G156300 Gossypium raimondii HOM05D004056 ORTHO05D004894 5.5e-55 218.4 210 58.6
CANSAT01G2574 Cannabis sativa HOM05D004056 ORTHO05D004894 7.2e-55 218.0 210 58.1
Gohir.D07G097700 Gossypium hirsutum HOM05D004056 ORTHO05D004894 7.2e-55 218.0 207 56.5
Gohir.D11G145800 Gossypium hirsutum HOM05D004056 ORTHO05D004894 7.2e-55 218.0 210 58.6
CDE09G0677 Ceratophyllum demersum HOM05D004056 ORTHO05D004894 9.4e-55 217.6 209 59.8
Gorai.001G105100 Gossypium raimondii HOM05D004056 ORTHO05D004894 1.6e-54 216.9 207 56.0
Manes.12G047500 Manihot esculenta HOM05D004056 ORTHO05D004894 3.6e-54 215.7 208 57.7
Gohir.A11G139600 Gossypium hirsutum HOM05D004056 ORTHO05D004894 6.1e-54 214.9 210 57.1
HPP92_024244 Vanilla planifolia HOM05D004056 ORTHO05D004894 1.0e-53 214.2 209 57.9
Gohir.A07G160800 Gossypium hirsutum HOM05D004056 ORTHO05D004894 1.4e-53 213.8 161 68.3
MD10G1159600 Malus domestica HOM05D004056 ORTHO05D004894 1.4e-53 213.8 198 60.6
VMungo1383G1286 Vigna mungo HOM05D004056 ORTHO05D004894 6.8e-53 211.5 203 58.6
CDE02G4431 Ceratophyllum demersum HOM05D004056 ORTHO05D004894 2.6e-52 209.5 155 72.3
TAR633G1317 Trochodendron aralioides HOM05D004056 ORTHO05D004894 3.4e-52 209.1 156 69.9
Phvul.008G131500 Phaseolus vulgaris HOM05D004056 ORTHO05D004894 7.5e-52 208.0 204 57.8
QL09p051117 Quercus lobata HOM05D004056 ORTHO05D004894 2.2e-51 206.5 135 76.3
MD05G1171400 Malus domestica HOM05D004056 ORTHO05D004894 2.8e-51 206.1 194 59.8
DCAR_018636 Daucus carota HOM05D004056 ORTHO05D004894 3.7e-51 205.7 197 57.9
Lsat_1_v5_gn_5_180841 Lactuca sativa HOM05D004056 ORTHO05D004894 1.4e-50 203.8 208 58.7
Lsat_1_v5_gn_8_89300 Lactuca sativa HOM05D004056 ORTHO05D004894 1.4e-50 203.8 210 56.2
unitig_736.g22344 Utricularia gibba HOM05D004056 ORTHO05D004894 1.4e-50 203.8 152 69.1
FAN24G0472 Fragaria x ananassa HOM05D004056 ORTHO05D008391 4.1e-50 202.2 214 55.1
FvH4_2g18520 Fragaria vesca HOM05D004056 ORTHO05D004894 5.4e-50 201.8 209 55.5
unitig_899.g15016 Utricularia gibba HOM05D004056 ORTHO05D004894 5.4e-50 201.8 155 67.7
Medtr7g055857 Medicago truncatula HOM05D004056 ORTHO05D004894 7.0e-50 201.4 203 59.1
RcHm_v2.0_Chr6g0284081 Rosa chinensis HOM05D004056 ORTHO05D004894 7.0e-50 201.4 186 59.7
GSVIVG01003250001 Vitis vinifera HOM05D004056 ORTHO05D004894 7.0e-50 201.4 134 75.4
Aqoxy5G00024 Aquilegia oxysepala HOM05D004056 ORTHO05D004894 2.0e-49 199.9 179 62.0
FAN27G1039 Fragaria x ananassa HOM05D004056 ORTHO05D004894 2.7e-49 199.5 200 57.0
HanXRQChr01g0015301 Helianthus annuus HOM05D004056 ORTHO05D004894 2.7e-49 199.5 206 56.3
Sed0007046 Sechium edule HOM05D004056 ORTHO05D004894 4.5e-49 198.7 188 59.6
MD10G1039600 Malus domestica HOM05D001916 ORTHO05D004894 7.7e-49 198.0 183 59.6
FAN15G2777 Fragaria x ananassa HOM05D004056 ORTHO05D008391 1.7e-48 196.8 208 55.3
Sc17g0002100 Simmondsia chinensis HOM05D004056 ORTHO05D004894 2.2e-48 196.4 206 53.4
ATR0561G205 Amborella trichopoda HOM05D004056 ORTHO05D004894 2.9e-48 196.1 199 56.8
EL10Ac7g17907 Beta vulgaris HOM05D004056 ORTHO05D004894 2.9e-48 196.1 227 53.7
arahy.Tifrunner.gnm1.ann1.8LB9ZD Arachis hypogaea HOM05D004056 ORTHO05D004894 8.5e-48 194.5 204 54.4
ClCG07G002100 Citrullus lanatus HOM05D004056 ORTHO05D004894 8.5e-48 194.5 205 56.1
Lalb_Chr19g0125861 Lupinus albus HOM05D004056 ORTHO05D004894 1.1e-47 194.1 202 57.4
unitig_26.g9438 Utricularia gibba HOM05D004056 ORTHO05D004894 1.9e-47 193.4 143 71.3
ClCG09G008620 Citrullus lanatus HOM05D004056 ORTHO05D004894 5.5e-47 191.8 193 56.5
HPP92_006215 Vanilla planifolia HOM05D004056 ORTHO05D004894 5.5e-47 191.8 187 57.2
Lj3g0018087 Lotus japonicus HOM05D004056 ORTHO05D004894 1.6e-46 190.3 212 55.2
Psat3g149240 Pisum sativum HOM05D004056 ORTHO05D004894 1.6e-46 190.3 205 55.6
Sed0026975 Sechium edule HOM05D004056 ORTHO05D004894 2.7e-46 189.5 190 57.9
MELO3C022718.2 Cucumis melo HOM05D004056 ORTHO05D004894 8.0e-46 188.0 190 58.4
PGR044G2021 Punica granatum HOM05D004056 ORTHO05D004894 8.0e-46 188.0 211 54.5
CsaV3_3G030040 Cucumis sativus L. HOM05D004056 ORTHO05D004894 1.0e-45 187.6 179 60.3
TPR.G11183 Trifolium pratense HOM05D004056 ORTHO05D004894 1.4e-45 187.2 216 54.2
Ca_23224_v3 Cicer arietinum L. HOM05D004056 ORTHO05D004894 1.8e-45 186.8 215 52.6
Medtr8g012655 Medicago truncatula HOM05D004056 ORTHO05D004894 2.3e-45 186.4 214 54.2
arahy.Tifrunner.gnm1.ann1.2MPX2Y Arachis hypogaea HOM05D004056 ORTHO05D004894 8.8e-45 184.5 135 69.6
CsaV3_7G026330 Cucumis sativus L. HOM05D004056 ORTHO05D004894 8.8e-45 184.5 184 56.5
HanXRQChr04g0108001 Helianthus annuus HOM05D004056 ORTHO05D004894 8.8e-45 184.5 205 53.2
Lj1g0006098 Lotus japonicus HOM05D004056 ORTHO05D004894 4.4e-44 182.2 210 52.4
Os02g0499000 Oryza sativa ssp. japonica HOM05D004056 ORTHO05D004894 7.5e-44 181.4 183 57.9
Glyma.08G348300 Glycine max HOM05D004056 ORTHO05D004894 3.7e-43 179.1 121 72.7
Hund18433 Selenicereus undatus HOM05D004056 ORTHO05D004894 4.9e-43 178.7 189 53.4
unitig_749.g13591 Utricularia gibba HOM05D004056 ORTHO05D004894 4.9e-43 178.7 137 67.9
AUR62001134 Chenopodium quinoa HOM05D004056 ORTHO05D004894 8.3e-43 177.9 221 48.9
Zm00001eb241420 Zea mays HOM05D004056 ORTHO05D004894 1.4e-42 177.2 212 52.4
AUR62016545 Chenopodium quinoa HOM05D004056 ORTHO05D004894 3.1e-42 176.0 202 51.0
Hund05580 Selenicereus undatus HOM05D004056 ORTHO05D004894 4.1e-42 175.6 212 51.4
Glyma.18G159900 Glycine max HOM05D004056 ORTHO05D004894 5.4e-42 175.3 118 72.0
SGA_v2.0_scaffold6G03510 Striga asiatica HOM05D004056 ORTHO05D004894 9.2e-42 174.5 207 50.2
THA.LOC104804624 Tarenaya hassleriana HOM05D004056 ORTHO05D004894 9.2e-42 174.5 108 78.7
ECA248G0601 Erigeron canadensis HOM05D004056 ORTHO05D004894 1.6e-41 173.7 189 55.6
VMungo0331G1907 Vigna mungo HOM05D004056 ORTHO05D004894 5.9e-41 171.8 157 59.9
CARHR218370 Cardamine hirsuta HOM05D004056 ORTHO05D004894 7.7e-41 171.4 103 78.6
TPR.G6483 Trifolium pratense HOM05D004056 ORTHO05D004894 1.7e-40 170.2 127 70.1
Ca_03473_v3 Cicer arietinum L. HOM05D004056 ORTHO05D004894 2.3e-40 169.9 124 71.8
Thhalv10026242m.g Eutrema salsugineum HOM05D004056 ORTHO05D004894 1.5e-39 167.2 103 77.7
Sp7g10210 Schrenkiella parvula HOM05D004056 ORTHO05D004894 2.5e-39 166.4 103 76.7
unitig_699.g19750 Utricularia gibba HOM05D004056 ORTHO05D004894 4.3e-39 165.6 180 52.8
BcaB04g17724 Brassica carinata HOM05D004056 ORTHO05D004894 5.6e-39 165.2 103 77.7
BraA08t32730Z Brassica rapa HOM05D004056 ORTHO05D004894 9.5e-39 164.5 109 72.5
C08p08780 Brassica napus HOM05D004056 ORTHO05D004894 1.2e-38 164.1 106 74.5
Sed0002122 Sechium edule HOM05D004056 ORTHO05D004894 1.2e-38 164.1 126 67.5
Aa31LG9G5020 Aethionema arabicum HOM05D004056 ORTHO05D004894 1.6e-38 163.7 102 77.5
BcaC07g37403 Brassica carinata HOM05D004056 ORTHO05D004894 2.8e-38 162.9 106 73.6
BolC8t47725H Brassica oleracea HOM05D004056 ORTHO05D004894 2.8e-38 162.9 106 73.6
Pp3c6_9830 Physcomitrium patens HOM05D004056 ORTHO05D004894 8.0e-38 161.4 103 74.8
MELO3C028860.2 Cucumis melo HOM05D004056 ORTHO05D004894 1.4e-37 160.6 264 42.4
PSO063G1373 Papaver somniferum HOM05D004056 ORTHO05D004894 2.3e-37 159.8 142 59.9
SMO172G0031 Selaginella moellendorffii HOM05D004056 ORTHO05D004894 5.2e-37 158.7 112 67.0
AL9U11310 Arabidopsis lyrata HOM05D004056 ORTHO05D004894 6.8e-37 158.3 110 72.7
PSO017G4055 Papaver somniferum HOM05D004056 ORTHO05D004894 1.5e-36 157.1 143 58.7
A08p07180 Brassica napus HOM05D004056 ORTHO05D004894 2.0e-36 156.8 125 64.0
AT4G13040 Arabidopsis thaliana HOM05D004056 ORTHO05D004894 3.4e-36 156.0 102 75.5
Pp3c5_19550 Physcomitrium patens HOM05D004056 ORTHO05D004894 5.7e-36 155.2 130 64.6
Ah.08g214620 Amaranthus hybridus HOM05D004056 ORTHO05D004894 7.0e-34 148.3 169 52.7
ECA236G1380 Erigeron canadensis HOM05D004056 ORTHO05D004894 9.2e-34 147.9 114 66.7
C08p08770 Brassica napus HOM05D004056 ORTHO05D004894 1.2e-30 137.5 87 75.9
BolC8t47724H Brassica oleracea HOM05D004056 ORTHO05D004894 1.2e-30 137.5 87 75.9
SMO361G0763 Selaginella moellendorffii HOM05D004056 ORTHO05D004894 1.3e-27 127.5 132 53.8
HanXRQChr08g0235681 Helianthus annuus HOM05D004056 ORTHO05D004894 4.9e-27 125.6 81 71.6
THA.LOC104808796 Tarenaya hassleriana HOM05D004056 ORTHO05D004894 1.9e-26 123.6 160 47.5
CSS0045016 Camellia sinensis var. sinensis HOM05D000011 ORTHO05D000018 1.9e-23 113.6 112 58.0
CSS0004822 Camellia sinensis var. sinensis HOM05D004056 ORTHO05D004894 3.3e-23 112.8 77 72.7
Psat4g203800 Pisum sativum HOM05D004056 ORTHO05D004894 5.2e-21 105.5 142 52.1
Carub.0007s2973 Capsella rubella HOM05D004056 ORTHO05D004894 8.9e-21 104.8 58 84.5
CBR_g38383 Chara braunii HOM05D004056 ORTHO05D004894 6.0e-17 92.0 118 43.2
HPP92_024205 Vanilla planifolia HOM05D004056 ORTHO05D004894 9.5e-15 84.7 209 33.0
Pp3c4_8660 Physcomitrium patens HOM05D004056 ORTHO05D004504 1.3e-11 74.3 80 47.5
Pp3c13_22780 Physcomitrium patens HOM05D004056 ORTHO05D004504 4.9e-11 72.4 127 34.6
RcHm_v2.0_Chr3g0472871 Rosa chinensis HOM05D004056 ORTHO05D004894 1.6e-09 67.4 40 77.5
HanXRQChr12g0358981 Helianthus annuus HOM05D004056 ORTHO05D004894 6.6e-08 62.0 43 62.8


User provided reference genes

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