Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu057857.3 Olea europaea HOM05D003029 ORTHO05D003413 0.0e+00 1149.0 676 100.0
Oeu030588.1 Olea europaea HOM05D003029 ORTHO05D003413 2.4e-61 241.1 298 58.7
Cc01_g16520 Coffea canephora HOM05D003029 ORTHO05D003413 2.6e-47 194.5 538 34.6
Lj2C1122G5 Lonicera japonica HOM05D003029 ORTHO05D003413 6.9e-32 143.3 326 36.8
Dinv14526 Davidia involucrata HOM05D003029 ORTHO05D003413 1.3e-30 139.0 546 29.1
SalBow6G0319 Salvia bowleyana HOM05D003029 ORTHO05D003413 3.6e-28 131.0 546 28.2
SalBow6G1280 Salvia bowleyana HOM05D003029 ORTHO05D003413 3.6e-28 131.0 546 28.2
Rhsim13G0050000 Rhododendron simsii HOM05D003029 ORTHO05D003413 1.6e-25 122.1 552 27.9
DCAR_012677 Daucus carota HOM05D003029 ORTHO05D003413 1.1e-24 119.4 321 31.5
Duzib212G0885 Durio zibethinus HOM05D003029 ORTHO05D003413 5.9e-23 113.6 162 40.1
Haze_11649 Corylus avellana HOM05D003029 ORTHO05D003413 7.7e-23 113.2 193 36.3
vmacro02792 Vaccinium macrocarpon HOM05D003029 ORTHO05D003413 1.7e-22 112.1 601 33.1
COL.COLO4_20221 Corchorus olitorius HOM05D003029 ORTHO05D003413 3.8e-22 110.9 215 34.0
Thecc.04G195700 Theobroma cacao HOM05D003029 ORTHO05D003413 5.0e-22 110.5 172 37.8
Prupe.1G164200 Prunus persica HOM05D003029 ORTHO05D003413 6.5e-22 110.2 150 40.0
TWI18G0251 Tripterygium wilfordii HOM05D003029 ORTHO05D003413 8.5e-22 109.8 164 37.2
Cfa014958 Carpinus fangiana HOM05D003029 ORTHO05D003413 1.4e-21 109.0 193 35.8
Duzib151G1197 Durio zibethinus HOM05D003029 ORTHO05D003413 1.9e-21 108.6 160 39.4
Nn3g20075 Nelumbo nucifera HOM05D003029 ORTHO05D003413 2.5e-21 108.2 158 40.5
Gorai.005G028200 Gossypium raimondii HOM05D003029 ORTHO05D003413 7.2e-21 106.7 172 39.0
Actinidia35843 Actinidia chinensis HOM05D003029 ORTHO05D003413 9.4e-21 106.3 153 40.5
GSVIVG01021020001 Vitis vinifera HOM05D003029 ORTHO05D003413 1.2e-20 105.9 158 41.1
Glyma.18G001900 Glycine max HOM05D003029 ORTHO05D003413 1.6e-20 105.5 154 39.6
TWI75G0963 Tripterygium wilfordii HOM05D003029 ORTHO05D003413 2.7e-20 104.8 151 40.4
Prupe.8G196300 Prunus persica HOM05D003029 ORTHO05D003413 3.6e-20 104.4 168 39.9
CSS0049755 Camellia sinensis var. sinensis HOM05D003029 ORTHO05D003413 4.6e-20 104.0 155 36.8
Gohir.D02G022800 Gossypium hirsutum HOM05D003029 ORTHO05D003413 4.6e-20 104.0 160 40.0
Atru.chr6.1447 Acer truncatum HOM05D003029 ORTHO05D003413 6.1e-20 103.6 169 37.9
Sabra17G0052100 Salix brachista HOM05D003029 ORTHO05D003413 6.1e-20 103.6 168 35.1
Nn3g20072 Nelumbo nucifera HOM05D003029 ORTHO05D003413 1.0e-19 102.8 159 38.4
PSO017G1724 Papaver somniferum HOM05D003029 ORTHO05D003413 1.0e-19 102.8 152 40.8
CiPaw.01G117300 Carya illinoinensis HOM05D003029 ORTHO05D003413 1.4e-19 102.4 150 35.3
Gorai.011G153200 Gossypium raimondii HOM05D003029 ORTHO05D003413 3.0e-19 101.3 160 36.2
CiPaw.02G064700 Carya illinoinensis HOM05D003029 ORTHO05D003413 3.9e-19 100.9 165 35.8
Glyma.11G255200 Glycine max HOM05D003029 ORTHO05D003413 3.9e-19 100.9 233 32.6
Glyma.05G152400 Glycine max HOM05D003029 ORTHO05D003413 5.1e-19 100.5 161 37.9
Gohir.A02G019500 Gossypium hirsutum HOM05D003029 ORTHO05D003413 5.1e-19 100.5 160 38.8
Gohir.A10G127900 Gossypium hirsutum HOM05D003029 ORTHO05D003413 5.1e-19 100.5 162 36.4
Gohir.D10G138100 Gossypium hirsutum HOM05D003029 ORTHO05D003413 5.1e-19 100.5 162 36.4
TAR362G1056 Trochodendron aralioides HOM05D003029 ORTHO05D003413 5.1e-19 100.5 160 38.1
Duzib268G0331 Durio zibethinus HOM05D003029 ORTHO05D003413 6.7e-19 100.1 173 37.0
TWI36G0576 Tripterygium wilfordii HOM05D003029 ORTHO05D003413 6.7e-19 100.1 151 39.1
Glyma.08G110100 Glycine max HOM05D003029 ORTHO05D003413 8.8e-19 99.8 163 38.7
Sc13g0000380 Simmondsia chinensis HOM05D003029 ORTHO05D003413 8.8e-19 99.8 151 37.1
Medtr8g081570 Medicago truncatula HOM05D003029 ORTHO05D003413 1.5e-18 99.0 160 36.9
Psat7g075040 Pisum sativum HOM05D003029 ORTHO05D003413 1.5e-18 99.0 158 37.3
Potri.017G058600 Populus trichocarpa HOM05D003029 ORTHO05D003413 1.5e-18 99.0 153 35.9
Manes.03G144600 Manihot esculenta HOM05D003029 ORTHO05D003413 2.0e-18 98.6 155 35.5
Atru.chr4.1590 Acer truncatum HOM05D003029 ORTHO05D003413 3.3e-18 97.8 149 36.9
Sabra17G0052200 Salix brachista HOM05D003029 ORTHO05D003413 3.3e-18 97.8 154 37.7
Lj4g0000581 Lotus japonicus HOM05D003029 ORTHO05D003413 5.7e-18 97.1 157 37.6
Actinidia21255 Actinidia chinensis HOM05D003029 ORTHO05D003413 7.4e-18 96.7 151 37.7
Sabra16G0202200 Salix brachista HOM05D003029 ORTHO05D003413 7.4e-18 96.7 154 37.0
Potri.017G058500 Populus trichocarpa HOM05D003029 ORTHO05D003413 9.7e-18 96.3 162 38.3
Sabra16G0202400 Salix brachista HOM05D003029 ORTHO05D003413 1.3e-17 95.9 219 34.7
GSVIVG01004954001 Vitis vinifera HOM05D003029 ORTHO05D003413 1.7e-17 95.5 165 37.0
Rhsim02G0061600 Rhododendron simsii HOM05D003029 ORTHO05D003413 2.2e-17 95.1 129 42.6
Actinidia21254 Actinidia chinensis HOM05D003029 ORTHO05D003413 2.8e-17 94.7 152 37.5
Gohir.D09G199800 Gossypium hirsutum HOM05D003029 ORTHO05D003413 2.8e-17 94.7 128 42.2
Gorai.006G223500 Gossypium raimondii HOM05D003029 ORTHO05D003413 2.8e-17 94.7 175 36.6
Lalb_Chr07g0186821 Lupinus albus HOM05D003029 ORTHO05D003413 3.7e-17 94.4 178 32.6
PSO063G2363 Papaver somniferum HOM05D003029 ORTHO05D003413 1.4e-16 92.4 164 37.2
TWI36G1114 Tripterygium wilfordii HOM05D003029 ORTHO05D003413 1.4e-16 92.4 550 24.9
TAR636G0249 Trochodendron aralioides HOM05D003029 ORTHO05D003413 1.4e-16 92.4 543 24.3
MD13G1282000 Malus domestica HOM05D003029 ORTHO05D003413 2.4e-16 91.7 150 36.0
arahy.Tifrunner.gnm1.ann1.R3AU9F Arachis hypogaea HOM05D003029 ORTHO05D003413 3.1e-16 91.3 159 34.6
MD04G1017000 Malus domestica HOM05D003029 ORTHO05D003413 3.1e-16 91.3 150 34.7
arahy.Tifrunner.gnm1.ann1.AU34HA Arachis hypogaea HOM05D003029 ORTHO05D003413 4.1e-16 90.9 159 34.0
MD04G1017100 Malus domestica HOM05D003029 ORTHO05D003413 4.1e-16 90.9 150 34.0
Aqoxy2G03937 Aquilegia oxysepala HOM05D003029 ORTHO05D003413 5.3e-16 90.5 125 40.8
FAN07G2221 Fragaria x ananassa HOM05D003029 ORTHO05D003413 6.9e-16 90.1 157 32.5
Phvul.003G050700 Phaseolus vulgaris HOM05D003029 ORTHO05D003413 1.2e-15 89.4 164 36.0
FvH4_4g13340 Fragaria vesca HOM05D003029 ORTHO05D003413 1.5e-15 89.0 157 32.5
FAN12G1114 Fragaria x ananassa HOM05D003029 ORTHO05D003413 1.5e-15 89.0 157 32.5
FAN22G0425 Fragaria x ananassa HOM05D003029 ORTHO05D003413 1.5e-15 89.0 157 32.5
Nitab4.5_0006920g0030 Nicotiana tabacum HOM05D003029 ORTHO05D003413 1.5e-15 89.0 135 39.3
VMungo0251G2529 Vigna mungo HOM05D003029 ORTHO05D003413 1.5e-15 89.0 160 35.0
Ca_17981_v3 Cicer arietinum L. HOM05D003029 ORTHO05D003413 2.0e-15 88.6 161 36.0
TPR.G11807 Trifolium pratense HOM05D003029 ORTHO05D003413 2.0e-15 88.6 160 35.0
TAR365G0314 Trochodendron aralioides HOM05D003029 ORTHO05D003413 2.0e-15 88.6 566 23.7
Nitab4.5_0006920g0010 Nicotiana tabacum HOM05D003029 ORTHO05D003413 2.6e-15 88.2 158 34.8
Ciclev10005071m.g Citrus clementina HOM05D003029 ORTHO05D003413 3.4e-15 87.8 150 36.0
Cc03_g08440 Coffea canephora HOM05D003029 ORTHO05D003413 3.4e-15 87.8 168 35.1
Lalb_Chr12g0205611 Lupinus albus HOM05D003029 ORTHO05D003413 3.4e-15 87.8 179 34.1
RcHm_v2.0_Chr4g0413691 Rosa chinensis HOM05D003029 ORTHO05D003413 3.4e-15 87.8 159 34.0
Cpa.g.sc157.52 Carica papaya HOM05D003029 ORTHO05D003413 4.5e-15 87.4 158 32.9
FAN17G0226 Fragaria x ananassa HOM05D003029 ORTHO05D003413 4.5e-15 87.4 157 32.5
Phvul.003G050800 Phaseolus vulgaris HOM05D003029 ORTHO05D003413 4.5e-15 87.4 160 35.0
Nitab4.5_0002260g0050 Nicotiana tabacum HOM05D003029 ORTHO05D003413 1.3e-14 85.9 158 34.2
Manes.13G051200 Manihot esculenta HOM05D003029 ORTHO05D003413 1.7e-14 85.5 534 26.6
CSS0036198 Camellia sinensis var. sinensis HOM05D003029 ORTHO05D003413 2.2e-14 85.1 125 43.2
Lalb_Chr13g0294851 Lupinus albus HOM05D003029 ORTHO05D003413 2.2e-14 85.1 169 32.0
Lalb_Chr23g0278361 Lupinus albus HOM05D003029 ORTHO05D003413 2.2e-14 85.1 160 35.6
Actinidia11454 Actinidia chinensis HOM05D003029 ORTHO05D003413 2.9e-14 84.7 69 56.5
Actinidia23384 Actinidia chinensis HOM05D003029 ORTHO05D003413 3.8e-14 84.3 538 27.3
Manes.12G049400 Manihot esculenta HOM05D003029 ORTHO05D003413 3.8e-14 84.3 229 30.1
Haze_03354 Corylus avellana HOM05D003029 ORTHO05D003413 5.0e-14 84.0 184 33.7
Peaxi162Scf00423g00411 Petunia axillaris HOM05D003029 ORTHO05D003413 5.0e-14 84.0 158 35.4
MSTRG.4243 Avicennia marina HOM05D003029 ORTHO05D003413 1.1e-13 82.8 159 34.0
DCAR_004743 Daucus carota HOM05D003029 ORTHO05D003413 1.1e-13 82.8 596 22.7
Oeu043441.1 Olea europaea HOM05D003029 ORTHO05D003413 1.4e-13 82.4 165 32.1
MBI07_g27661_MAGBIO Magnolia biondii HOM05D003029 ORTHO05D003413 2.5e-13 81.6 69 56.5
Migut.D02515 Erythranthe guttata HOM05D003029 ORTHO05D003413 3.2e-13 81.3 181 36.5
VMungo0251G3135 Vigna mungo HOM05D003029 ORTHO05D003413 3.2e-13 81.3 164 34.8
CAN.G767.12 Capsicum annuum HOM05D003029 ORTHO05D003413 4.2e-13 80.9 87 48.3
AUR62020859 Chenopodium quinoa HOM05D003029 ORTHO05D003413 9.4e-13 79.7 188 30.9
MBI07_g42750_MAGBIO Magnolia biondii HOM05D003029 ORTHO05D003413 9.4e-13 79.7 190 32.1
THA.LOC104822483 Tarenaya hassleriana HOM05D003029 ORTHO05D003413 9.4e-13 79.7 126 38.1
Nitab4.5_0000850g0180 Nicotiana tabacum HOM05D003029 ORTHO05D003413 2.1e-12 78.6 176 31.8
Sed0025519 Sechium edule HOM05D003029 ORTHO05D003413 2.1e-12 78.6 199 31.2
Solyc12g098463.1 Solanum lycopersicum HOM05D003029 ORTHO05D003413 2.1e-12 78.6 87 46.0
Sopen12g033250 Solanum pennellii HOM05D003029 ORTHO05D003413 2.1e-12 78.6 87 46.0
BolC1t05561H Brassica oleracea HOM05D003029 ORTHO05D003413 2.7e-12 78.2 168 35.1
DCAR_026643 Daucus carota HOM05D003029 ORTHO05D003413 2.7e-12 78.2 152 28.9
Ah.04g149350 Amaranthus hybridus HOM05D003029 ORTHO05D003413 3.6e-12 77.8 103 40.8
Nitab4.5_0000676g0030 Nicotiana tabacum HOM05D003029 ORTHO05D003413 3.6e-12 77.8 169 32.0
SalBow3G0925 Salvia bowleyana HOM05D003029 ORTHO05D003413 3.6e-12 77.8 69 55.1
EL10Ac3g07458 Beta vulgaris HOM05D003029 ORTHO05D003413 4.7e-12 77.4 130 35.4
Carub.0008s0826 Capsella rubella HOM05D003029 ORTHO05D003413 4.7e-12 77.4 152 36.2
AUR62018560 Chenopodium quinoa HOM05D003029 ORTHO05D003413 4.7e-12 77.4 188 30.3
C03p42770 Brassica napus HOM05D003029 ORTHO05D003413 6.1e-12 77.0 171 32.7
BolC3t16546H Brassica oleracea HOM05D003029 ORTHO05D003413 6.1e-12 77.0 171 32.7
PGSC0003DMG400015747 Solanum tuberosum HOM05D003029 ORTHO05D003413 6.1e-12 77.0 69 50.7
BcaB04g21298 Brassica carinata HOM05D003029 ORTHO05D003413 7.9e-12 76.6 169 36.7
Medtr3g084030 Medicago truncatula HOM05D005635 ORTHO05D006838 7.9e-12 76.6 139 34.5
Hund19006 Selenicereus undatus HOM05D003029 ORTHO05D003413 7.9e-12 76.6 173 34.1
SGA_v2.0_scaffold270G46323 Striga asiatica HOM05D003029 ORTHO05D003413 7.9e-12 76.6 159 32.7
MELO3C020427.2 Cucumis melo HOM05D003029 ORTHO05D003413 1.0e-11 76.3 199 31.2
Sp3g06210 Schrenkiella parvula HOM05D003029 ORTHO05D003413 1.0e-11 76.3 170 35.3
Sp3g06230 Schrenkiella parvula HOM05D003029 ORTHO05D003413 1.0e-11 76.3 138 38.4
Sed0005118 Sechium edule HOM05D003029 ORTHO05D003413 1.0e-11 76.3 108 39.8
MSTRG.9800 Avicennia marina HOM05D003029 ORTHO05D003413 1.8e-11 75.5 161 33.5
BraA01t04389Z Brassica rapa HOM05D003029 ORTHO05D003413 1.8e-11 75.5 239 31.8
SGA_v2.0_scaffold156G37278 Striga asiatica HOM05D003029 ORTHO05D003413 1.8e-11 75.5 74 50.0
BNapus_Darmor_BZH_scaffold_109p00150 Brassica napus HOM05D003029 ORTHO05D003413 2.3e-11 75.1 169 35.5
CAN.G765.36 Capsicum annuum HOM05D003029 ORTHO05D003413 3.0e-11 74.7 70 51.4
ClCG06G007970 Citrullus lanatus HOM05D003029 ORTHO05D003413 3.0e-11 74.7 222 27.9
Sopen05g032240 Solanum pennellii HOM05D003029 ORTHO05D003413 3.0e-11 74.7 69 49.3
A03p35170 Brassica napus HOM05D003029 ORTHO05D003413 3.9e-11 74.3 170 34.7
QL06p026140 Quercus lobata HOM05D003029 ORTHO05D003413 3.9e-11 74.3 158 30.4
ClCG05G003130 Citrullus lanatus HOM05D003029 ORTHO05D003413 5.2e-11 73.9 174 34.5
CsaV3_2G011760 Cucumis sativus L. HOM05D003029 ORTHO05D003413 1.1e-10 72.8 171 33.9
CDE05G0723 Ceratophyllum demersum HOM05D003029 ORTHO05D003413 1.5e-10 72.4 97 39.2
Eucgr.H00027 Eucalyptus grandis HOM05D003029 ORTHO05D003413 2.0e-10 72.0 179 30.7
AL3G18580 Arabidopsis lyrata HOM05D003029 ORTHO05D003413 2.6e-10 71.6 109 42.2
BraA03t12696Z Brassica rapa HOM05D003029 ORTHO05D003413 2.6e-10 71.6 170 33.5
BraA06t26818Z Brassica rapa HOM05D003029 ORTHO05D003413 2.6e-10 71.6 163 34.4
Solyc05g053770.4 Solanum lycopersicum HOM05D003029 ORTHO05D003413 2.6e-10 71.6 69 47.8
AT5G43490 Arabidopsis thaliana HOM05D003029 ORTHO05D003413 3.3e-10 71.2 125 39.2
MELO3C006294.2 Cucumis melo HOM05D003029 ORTHO05D003413 4.4e-10 70.9 146 32.9
HPP92_025250 Vanilla planifolia HOM05D003029 ORTHO05D003413 4.4e-10 70.9 92 44.6
AL625U10010 Arabidopsis lyrata HOM05D003029 ORTHO05D003413 5.7e-10 70.5 165 32.7
Carub.0003s0681 Capsella rubella HOM05D003029 ORTHO05D003413 5.7e-10 70.5 124 36.3
Migut.G00757 Erythranthe guttata HOM05D003029 ORTHO05D003413 7.4e-10 70.1 237 29.1
HanXRQChr01g0022171 Helianthus annuus HOM05D003029 ORTHO05D003413 1.3e-09 69.3 72 51.4
CARHR292000 Cardamine hirsuta HOM05D003029 ORTHO05D003413 1.7e-09 68.9 162 32.1
CsaV3_3G010750 Cucumis sativus L. HOM05D003029 ORTHO05D003413 1.7e-09 68.9 141 33.3
ECA248G1735 Erigeron canadensis HOM05D003029 ORTHO05D003413 2.2e-09 68.6 71 46.5
Zm00001eb210840 Zea mays HOM05D003029 ORTHO05D003413 2.2e-09 68.6 103 36.9
CiPaw.14G040000 Carya illinoinensis HOM05D003029 ORTHO05D003413 2.8e-09 68.2 548 25.0
PGR083G2864 Punica granatum HOM05D003029 ORTHO05D003413 3.7e-09 67.8 126 37.3
Oeu049048.2 Olea europaea HOM05D003029 ORTHO05D003413 4.8e-09 67.4 179 28.5
Ah.13g077980 Amaranthus hybridus HOM05D003029 ORTHO05D003413 6.3e-09 67.0 105 38.1
BcaC06g30775 Brassica carinata HOM05D003029 ORTHO05D003413 6.3e-09 67.0 163 33.1
C07p39290 Brassica napus HOM05D003029 ORTHO05D003413 6.3e-09 67.0 163 33.1
BolC7t44449H Brassica oleracea HOM05D003029 ORTHO05D003413 6.3e-09 67.0 163 33.1
MBI07_g16779_MAGBIO Magnolia biondii HOM05D003029 ORTHO05D003413 1.1e-08 66.2 117 35.9
ATR0561G140 Amborella trichopoda HOM05D003029 ORTHO05D003413 1.4e-08 65.9 69 47.8
Thhalv10004154m.g Eutrema salsugineum HOM05D003029 ORTHO05D003413 1.4e-08 65.9 126 37.3
Thhalv10020618m.g Eutrema salsugineum HOM05D003029 ORTHO05D003413 1.4e-08 65.9 125 40.0
Gohir.A09G206200 Gossypium hirsutum HOM05D003029 ORTHO05D003413 1.4e-08 65.9 140 32.1
Lsat_1_v5_gn_1_70641 Lactuca sativa HOM05D003029 ORTHO05D003413 1.4e-08 65.9 72 48.6
BcaC05g29734 Brassica carinata HOM05D003029 ORTHO05D003413 1.8e-08 65.5 171 31.6
A05p40910 Brassica napus HOM05D003029 ORTHO05D003413 2.4e-08 65.1 121 38.8
BraA05t22820Z Brassica rapa HOM05D003029 ORTHO05D003413 2.4e-08 65.1 121 38.8
unitig_8.g3407 Utricularia gibba HOM05D003029 ORTHO05D003413 3.1e-08 64.7 87 41.4
Zm00001eb064410 Zea mays HOM05D003029 ORTHO05D003413 3.1e-08 64.7 86 36.0
A06p39050 Brassica napus HOM05D003029 ORTHO05D003413 4.1e-08 64.3 163 31.9
Sp2g18960 Schrenkiella parvula HOM05D003029 ORTHO05D003413 7.0e-08 63.5 163 30.1
Sc05g0001900 Simmondsia chinensis HOM05D003029 ORTHO05D003413 1.6e-07 62.4 525 22.9
Rhsim09G0059700 Rhododendron simsii HOM05D003029 ORTHO05D003413 2.0e-07 62.0 61 52.5
HPP92_006969 Vanilla planifolia HOM05D003029 ORTHO05D003413 2.0e-07 62.0 72 43.1
CANSAT78G1052 Cannabis sativa HOM05D003029 ORTHO05D003413 5.9e-07 60.5 64 43.8
Oeu056423.1 Olea europaea HOM05D003029 ORTHO05D003413 1.3e-06 59.3 67 38.8
Zm00001eb036180 Zea mays HOM05D003029 ORTHO05D003413 1.7e-06 58.9 85 34.1
CDE02G0447 Ceratophyllum demersum HOM05D003029 ORTHO05D003413 2.9e-06 58.2 64 46.9
Psat5g100760 Pisum sativum HOM05D003029 ORTHO05D003413 5.0e-06 57.4 176 26.1


User provided reference genes

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