Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu057829.1 Olea europaea HOM05D005211 ORTHO05D006148 9.0e-75 283.5 142 100.0
Oeu003658.1 Olea europaea HOM05D005211 ORTHO05D006148 3.4e-58 228.4 152 76.3
Oeu013415.1 Olea europaea HOM05D005211 ORTHO05D006148 4.1e-35 151.8 152 52.6
Lj2P1117T13 Lonicera japonica HOM05D005211 ORTHO05D006148 8.0e-31 137.5 149 49.7
Cc01_g16110 Coffea canephora HOM05D005211 ORTHO05D006148 8.8e-30 134.0 140 54.3
TAR636G0814 Trochodendron aralioides HOM05D005211 ORTHO05D006148 1.7e-28 129.8 150 48.7
QL10p044103 Quercus lobata HOM05D005211 ORTHO05D006148 2.8e-28 129.0 141 46.8
CSS0012153 Camellia sinensis var. sinensis HOM05D005211 ORTHO05D006148 1.1e-27 127.1 145 55.2
CSS0028586 Camellia sinensis var. sinensis HOM05D005211 ORTHO05D006148 1.1e-27 127.1 145 55.2
MD05G1158800 Malus domestica HOM05D005211 ORTHO05D006148 2.4e-27 125.9 146 47.3
MD10G1151700 Malus domestica HOM05D005211 ORTHO05D006148 4.1e-27 125.2 145 47.6
Lj1P101T27 Lonicera japonica HOM05D005211 ORTHO05D006148 7.0e-27 124.4 149 50.3
Nn1g08305 Nelumbo nucifera HOM05D005211 ORTHO05D006148 2.0e-26 122.9 151 46.4
TAR365G0119 Trochodendron aralioides HOM05D005211 ORTHO05D006148 3.5e-26 122.1 148 47.3
Migut.D00738 Erythranthe guttata HOM05D005211 ORTHO05D006148 4.5e-26 121.7 164 44.5
TAR633G2277 Trochodendron aralioides HOM05D005211 ORTHO05D006148 5.9e-26 121.3 142 51.4
Aqoxy2G03955 Aquilegia oxysepala HOM05D005211 ORTHO05D006148 8.5e-25 117.5 147 42.2
Gohir.D07G203100 Gossypium hirsutum HOM05D005211 ORTHO05D006148 8.5e-25 117.5 157 43.9
CiPaw.01G108100 Carya illinoinensis HOM05D005211 ORTHO05D006148 1.9e-24 116.3 144 46.5
Duzib133G1390 Durio zibethinus HOM05D005211 ORTHO05D006148 1.9e-24 116.3 164 42.1
RcHm_v2.0_Chr6g0282791 Rosa chinensis HOM05D005211 ORTHO05D006148 1.9e-24 116.3 155 43.2
CiPaw.14G044000 Carya illinoinensis HOM05D005211 ORTHO05D006148 2.5e-24 115.9 151 43.7
Gohir.A07G196700 Gossypium hirsutum HOM05D005211 ORTHO05D006148 2.5e-24 115.9 157 43.3
Prupe.8G190100 Prunus persica HOM05D005211 ORTHO05D006148 2.5e-24 115.9 148 45.9
Cpa.g.sc8.70 Carica papaya HOM05D005211 ORTHO05D006148 3.2e-24 115.5 156 44.2
Gorai.001G228500 Gossypium raimondii HOM05D005211 ORTHO05D006148 3.2e-24 115.5 157 43.3
Duzib211G0461 Durio zibethinus HOM05D005211 ORTHO05D006148 4.2e-24 115.2 166 41.6
Oeu049588.1 Olea europaea HOM05D005211 ORTHO05D006148 4.2e-24 115.2 99 57.6
TWI18G0981 Tripterygium wilfordii HOM05D005211 ORTHO05D006148 5.5e-24 114.8 150 42.0
CiPaw.13G055500 Carya illinoinensis HOM05D005211 ORTHO05D006148 9.4e-24 114.0 150 44.7
Duzib138G1875 Durio zibethinus HOM05D005211 ORTHO05D006148 2.1e-23 112.8 158 43.7
EL10Ac5g10623 Beta vulgaris HOM05D005211 ORTHO05D006148 2.7e-23 112.5 155 43.2
FAN24G0649 Fragaria x ananassa HOM05D005211 ORTHO05D006148 2.7e-23 112.5 157 42.7
Gohir.A11G142700 Gossypium hirsutum HOM05D005211 ORTHO05D006148 2.7e-23 112.5 167 41.9
FAN27G2625 Fragaria x ananassa HOM05D005211 ORTHO05D006148 3.6e-23 112.1 157 43.3
SGA_v2.0_scaffold77G25295 Striga asiatica HOM05D005211 ORTHO05D006148 3.6e-23 112.1 139 44.6
Gohir.D11G149000 Gossypium hirsutum HOM05D005211 ORTHO05D006148 4.7e-23 111.7 167 41.9
Eucgr.H00724 Eucalyptus grandis HOM05D005211 ORTHO05D006148 6.1e-23 111.3 162 42.0
Actinidia23357 Actinidia chinensis HOM05D005211 ORTHO05D006148 8.0e-23 110.9 141 48.2
Gorai.007G159800 Gossypium raimondii HOM05D005211 ORTHO05D006148 8.0e-23 110.9 172 41.3
Manes.11G114000 Manihot esculenta HOM05D005211 ORTHO05D006148 8.0e-23 110.9 146 41.8
TWI36G1602 Tripterygium wilfordii HOM05D005211 ORTHO05D006148 1.4e-22 110.2 149 43.6
Dinv28809 Davidia involucrata HOM05D005211 ORTHO05D006148 1.8e-22 109.8 147 46.9
Manes.13G054600 Manihot esculenta HOM05D005211 ORTHO05D006148 2.3e-22 109.4 163 39.9
Sc17g0001650 Simmondsia chinensis HOM05D005211 ORTHO05D006148 2.3e-22 109.4 136 44.1
FAN27G1389 Fragaria x ananassa HOM05D005211 ORTHO05D006148 4.0e-22 108.6 156 46.2
RcHm_v2.0_Chr6g0282781 Rosa chinensis HOM05D005211 ORTHO05D006148 4.0e-22 108.6 156 42.9
Migut.N00665 Erythranthe guttata HOM05D005211 ORTHO05D006148 8.8e-22 107.5 138 44.2
Cfa008551 Carpinus fangiana HOM05D005211 ORTHO05D006148 1.2e-21 107.1 148 41.2
MD05G1158700 Malus domestica HOM05D005211 ORTHO05D006148 1.5e-21 106.7 157 40.1
CDE07G0882 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 2.0e-21 106.3 151 40.4
FAN15G0641 Fragaria x ananassa HOM05D005211 ORTHO05D006148 2.6e-21 105.9 156 44.9
FvH4_2g17750 Fragaria vesca HOM05D005211 ORTHO05D006148 5.7e-21 104.8 157 43.3
FAN24G3081 Fragaria x ananassa HOM05D005211 ORTHO05D006148 5.7e-21 104.8 157 43.3
Potri.002G232500 Populus trichocarpa HOM05D005211 ORTHO05D006148 7.5e-21 104.4 146 41.1
PGSC0003DMG400005560 Solanum tuberosum HOM05D005211 ORTHO05D006148 9.8e-21 104.0 142 45.1
Thecc.01G210700 Theobroma cacao HOM05D005211 ORTHO05D006148 9.8e-21 104.0 149 42.3
QL93p0263_0042 Quercus lobata HOM05D005211 ORTHO05D006148 1.3e-20 103.6 144 45.8
FvH4_2g17760 Fragaria vesca HOM05D005211 ORTHO05D006148 1.7e-20 103.2 148 42.6
COL.COLO4_26568 Corchorus olitorius HOM05D005211 ORTHO05D006148 2.2e-20 102.8 152 42.8
MBI07_g35368_MAGBIO Magnolia biondii HOM05D005211 ORTHO05D006148 2.8e-20 102.4 135 43.0
FAN22G0070 Fragaria x ananassa HOM05D005211 ORTHO05D006148 4.8e-20 101.7 146 38.4
FAN12G3367 Fragaria x ananassa HOM05D005211 ORTHO05D006148 8.3e-20 100.9 143 37.8
MD10G1151600 Malus domestica HOM05D005211 ORTHO05D006148 8.3e-20 100.9 169 38.5
FAN07G0144 Fragaria x ananassa HOM05D005211 ORTHO05D006148 1.1e-19 100.5 143 38.5
RcHm_v2.0_Chr4g0409781 Rosa chinensis HOM05D005211 ORTHO05D006148 1.1e-19 100.5 146 39.7
FAN12G0052 Fragaria x ananassa HOM05D005211 ORTHO05D006148 1.4e-19 100.1 141 37.6
Sabra02G0177300 Salix brachista HOM05D005211 ORTHO05D006148 2.4e-19 99.4 146 41.1
CDE04G3135 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 3.1e-19 99.0 151 41.1
AUR62028696 Chenopodium quinoa HOM05D005211 ORTHO05D006148 7.0e-19 97.8 149 42.3
Hma1.2p1_0959F.1_g241620 Hydrangea macrophylla HOM05D005211 ORTHO05D006148 7.0e-19 97.8 119 43.7
Ciclev10016996m.g Citrus clementina HOM05D005211 ORTHO05D006148 9.1e-19 97.4 157 39.5
HanXRQChr01g0007251 Helianthus annuus HOM05D005211 ORTHO05D006148 1.6e-18 96.7 154 37.7
CiPaw.02G059600 Carya illinoinensis HOM05D005211 ORTHO05D006148 2.0e-18 96.3 148 39.9
Prupe.8G190000 Prunus persica HOM05D005211 ORTHO05D006148 2.7e-18 95.9 139 43.9
Haze_11077 Corylus avellana HOM05D005211 ORTHO05D006148 3.5e-18 95.5 126 40.5
Prupe.1G178500 Prunus persica HOM05D005211 ORTHO05D006148 4.5e-18 95.1 152 36.2
Lsat_1_v5_gn_5_178301 Lactuca sativa HOM05D005211 ORTHO05D006148 5.9e-18 94.7 165 38.8
PGR083G0764 Punica granatum HOM05D005211 ORTHO05D006148 5.9e-18 94.7 150 41.3
Sabra14G0113200 Salix brachista HOM05D005211 ORTHO05D006148 5.9e-18 94.7 151 35.8
Potri.014G149800 Populus trichocarpa HOM05D005211 ORTHO05D006148 7.7e-18 94.4 155 38.7
MSTRG.18497 Avicennia marina HOM05D005211 ORTHO05D006148 1.0e-17 94.0 135 45.2
vmacro02818 Vaccinium macrocarpon HOM05D005211 ORTHO05D006148 1.3e-17 93.6 161 38.5
PSO675G5714 Papaver somniferum HOM05D005211 ORTHO05D006148 1.7e-17 93.2 162 35.2
Sed0015684 Sechium edule HOM05D005211 ORTHO05D006148 2.3e-17 92.8 107 46.7
Eucgr.H00442 Eucalyptus grandis HOM05D005211 ORTHO05D006148 2.9e-17 92.4 143 35.7
MELO3C026134.2 Cucumis melo HOM05D005211 ORTHO05D006148 5.0e-17 91.7 137 38.0
unitig_0.g414 Utricularia gibba HOM05D005211 ORTHO05D006148 5.0e-17 91.7 134 37.3
CANSAT78G0009 Cannabis sativa HOM05D005211 ORTHO05D006148 8.6e-17 90.9 173 31.2
QL09p046680 Quercus lobata HOM05D005211 ORTHO05D006148 8.6e-17 90.9 139 43.2
Solyc12g042010.1 Solanum lycopersicum HOM05D005211 ORTHO05D006148 1.1e-16 90.5 135 43.7
DCAR_004769 Daucus carota HOM05D005211 ORTHO05D006148 1.5e-16 90.1 136 41.9
CANSAT01G0934 Cannabis sativa HOM05D005211 ORTHO05D006148 1.9e-16 89.7 156 37.2
PGR142G0694 Punica granatum HOM05D005211 ORTHO05D006148 1.9e-16 89.7 166 33.1
Dinv10443 Davidia involucrata HOM05D005211 ORTHO05D006148 4.2e-16 88.6 161 37.9
Hma1.2p1_0412F.1_g147140 Hydrangea macrophylla HOM05D005211 ORTHO05D006148 4.2e-16 88.6 115 41.7
ClCG08G003780 Citrullus lanatus HOM05D005211 ORTHO05D006148 7.2e-16 87.8 138 37.7
unitig_52.g17443 Utricularia gibba HOM05D005211 ORTHO05D006148 7.2e-16 87.8 140 39.3
FAN22G0040 Fragaria x ananassa HOM05D005211 ORTHO05D006148 9.5e-16 87.4 107 41.1
HPP92_023344 Vanilla planifolia HOM05D005211 ORTHO05D006148 1.2e-15 87.0 137 41.6
Actinidia30014 Actinidia chinensis HOM05D005211 ORTHO05D006148 2.8e-15 85.9 89 51.7
ATR0686G247 Amborella trichopoda HOM05D005211 ORTHO05D006148 4.7e-15 85.1 141 39.0
CDE02G4090 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 8.0e-15 84.3 145 37.9
Manes.12G059000 Manihot esculenta HOM05D005211 ORTHO05D006148 8.0e-15 84.3 132 36.4
Aa31LG1G24830 Aethionema arabicum HOM05D005211 ORTHO05D006148 1.0e-14 84.0 134 40.3
CsaV3_6G003020 Cucumis sativus L. HOM05D005211 ORTHO05D006148 1.4e-14 83.6 94 45.7
Nitab4.5_0004516g0010 Nicotiana tabacum HOM05D005211 ORTHO05D006148 2.3e-14 82.8 79 55.7
TWI63G1319 Tripterygium wilfordii HOM05D005211 ORTHO05D006148 2.3e-14 82.8 141 38.3
THA.LOC104803428 Tarenaya hassleriana HOM05D005211 ORTHO05D006148 3.0e-14 82.4 158 36.1
Rhsim13G0052900 Rhododendron simsii HOM05D005211 ORTHO05D006148 5.2e-14 81.6 120 42.5
THA.LOC104802290 Tarenaya hassleriana HOM05D005211 ORTHO05D006148 1.2e-13 80.5 151 36.4
BNapus_Darmor_BZH_scaffold_64p00090 Brassica napus HOM05D005211 ORTHO05D006148 2.6e-13 79.3 145 36.6
BraA04t18707Z Brassica rapa HOM05D005211 ORTHO05D006148 2.6e-13 79.3 145 36.6
ECA247G2119 Erigeron canadensis HOM05D005211 ORTHO05D006148 2.6e-13 79.3 116 41.4
Thhalv10017615m.g Eutrema salsugineum HOM05D005211 ORTHO05D006148 2.6e-13 79.3 135 38.5
Peaxi162Scf00335g00067 Petunia axillaris HOM05D005211 ORTHO05D006148 2.6e-13 79.3 84 52.4
Gorai.N002800 Gossypium raimondii HOM05D005211 ORTHO05D006148 3.4e-13 79.0 138 42.8
Gohir.D07G167400 Gossypium hirsutum HOM05D005211 ORTHO05D006148 5.7e-13 78.2 102 43.1
Sopen09g012960 Solanum pennellii HOM05D005211 ORTHO05D006148 7.5e-13 77.8 108 44.4
Carub.0004s2554 Capsella rubella HOM05D005211 ORTHO05D006148 9.8e-13 77.4 141 39.7
Gohir.A07G159000 Gossypium hirsutum HOM05D005211 ORTHO05D006148 1.7e-12 76.6 130 43.8
BcaNung03535 Brassica carinata HOM05D005211 ORTHO05D006148 2.8e-12 75.9 144 36.8
AL4G41710 Arabidopsis lyrata HOM05D005211 ORTHO05D006148 6.3e-12 74.7 145 37.9
AT2G43060 Arabidopsis thaliana HOM05D005211 ORTHO05D006148 6.3e-12 74.7 141 36.2
BcaB06g29284 Brassica carinata HOM05D005211 ORTHO05D006148 6.3e-12 74.7 150 37.3
BcaB06g29285 Brassica carinata HOM05D005211 ORTHO05D006148 6.3e-12 74.7 150 37.3
Sp4g25190 Schrenkiella parvula HOM05D005211 ORTHO05D006148 6.3e-12 74.7 144 37.5
FAN15G2376 Fragaria x ananassa HOM05D005211 ORTHO05D006148 1.1e-11 73.9 100 43.0
CDE09G1368 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 1.4e-11 73.6 142 38.0
CSS0032639 Camellia sinensis var. sinensis HOM05D005211 ORTHO05D006148 1.8e-11 73.2 71 50.7
A05p03550 Brassica napus HOM05D005211 ORTHO05D006148 2.4e-11 72.8 139 37.4
BraA05t19341Z Brassica rapa HOM05D005211 ORTHO05D006148 2.4e-11 72.8 139 37.4
CARHR138130 Cardamine hirsuta HOM05D005211 ORTHO05D006148 4.1e-11 72.0 148 33.1
Ah.11g050990 Amaranthus hybridus HOM05D005211 ORTHO05D006148 9.2e-11 70.9 113 40.7
Atru.chr6.3543 Acer truncatum HOM05D005211 ORTHO05D006148 4.5e-10 68.6 145 37.2
BcaC02g12418 Brassica carinata HOM05D005211 ORTHO05D006148 1.3e-09 67.0 146 33.6
BolC4t22051H Brassica oleracea HOM05D005211 ORTHO05D006148 1.3e-09 67.0 146 33.6
Os04g0660100 Oryza sativa ssp. japonica HOM05D005211 ORTHO05D006148 2.3e-09 66.2 165 30.3
C04p04120 Brassica napus HOM05D005211 ORTHO05D006148 5.0e-09 65.1 145 33.8
C04p70060 Brassica napus HOM05D005211 ORTHO05D006148 2.5e-08 62.8 132 37.1
BolC4t28506H Brassica oleracea HOM05D005211 ORTHO05D006148 2.5e-08 62.8 132 37.1
Zm00001eb432720 Zea mays HOM05D005211 ORTHO05D006148 7.3e-08 61.2 164 29.9
QL10p006175 Quercus lobata HOM05D000022 ORTHO05D006148 1.4e-06 57.0 80 45.0


User provided reference genes

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