Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu057730.1 Olea europaea HOM05D007903 ORTHO05D009925 2.0e-101 372.5 190 100.0
Hma1.2p1_1875F.1_g306260 Hydrangea macrophylla HOM05D007903 ORTHO05D009925 6.3e-31 138.3 167 52.1
CSS0015489 Camellia sinensis var. sinensis HOM05D007903 ORTHO05D009925 3.1e-30 136.0 166 51.2
TAR374G1449 Trochodendron aralioides HOM05D007903 ORTHO05D009925 5.9e-29 131.7 164 47.6
Haze_00633 Corylus avellana HOM05D007903 ORTHO05D009925 3.8e-28 129.0 159 49.7
Cfa015866 Carpinus fangiana HOM05D007903 ORTHO05D009925 3.2e-27 125.9 162 47.5
Hma1.2p1_2787F.1_g328510 Hydrangea macrophylla HOM05D007903 ORTHO05D009925 1.6e-26 123.6 141 53.2
CAN.G25.18 Capsicum annuum HOM05D007903 ORTHO05D009925 6.1e-26 121.7 174 46.6
CiPaw.05G239700 Carya illinoinensis HOM05D007903 ORTHO05D009925 1.8e-25 120.2 171 44.4
PGSC0003DMG400006002 Solanum tuberosum HOM05D007903 ORTHO05D009925 1.8e-25 120.2 173 46.2
Peaxi162Scf00564g00039 Petunia axillaris HOM05D007903 ORTHO05D009925 1.1e-22 110.9 128 50.0
Potri.008G122700 Populus trichocarpa HOM05D007903 ORTHO05D009925 1.8e-22 110.2 162 45.7
QL01p040711 Quercus lobata HOM05D007903 ORTHO05D009925 3.1e-22 109.4 140 45.7
Potri.010G122600 Populus trichocarpa HOM05D007903 ORTHO05D009925 1.2e-21 107.5 162 45.7
Thecc.02G225400 Theobroma cacao HOM05D007903 ORTHO05D009925 1.5e-21 107.1 170 41.8
Aqoxy3G00252 Aquilegia oxysepala HOM05D007903 ORTHO05D009925 7.7e-21 104.8 173 45.1
Solyc04g007360.1 Solanum lycopersicum HOM05D007903 ORTHO05D009925 2.2e-20 103.2 173 41.0
Nn4g23903 Nelumbo nucifera HOM05D007903 ORTHO05D009925 2.9e-20 102.8 173 42.2
Ciclev10017603m.g Citrus clementina HOM05D007903 ORTHO05D009925 3.8e-20 102.4 174 42.0
CSS0009081 Camellia sinensis var. sinensis HOM05D007903 ORTHO05D009925 5.0e-20 102.1 142 42.3
DCAR_030171 Daucus carota HOM05D007903 ORTHO05D009925 2.5e-19 99.8 158 39.2
Manes.14G104700 Manihot esculenta HOM05D007903 ORTHO05D009925 2.1e-18 96.7 168 41.1
FAN12G2568 Fragaria x ananassa HOM05D007903 ORTHO05D009925 3.6e-18 95.9 159 37.1
Sopen04g002420 Solanum pennellii HOM05D007903 ORTHO05D009925 4.6e-18 95.5 131 42.7
CSS0036148 Camellia sinensis var. sinensis HOM05D007903 ORTHO05D009925 6.1e-18 95.1 142 40.1
Migut.E00359 Erythranthe guttata HOM05D007903 ORTHO05D009925 2.3e-17 93.2 162 42.0
FAN07G0160 Fragaria x ananassa HOM05D007903 ORTHO05D009925 2.3e-17 93.2 158 37.3
CsaV3_5G034450 Cucumis sativus L. HOM05D007903 ORTHO05D009925 3.0e-17 92.8 146 39.7
FAN22G0942 Fragaria x ananassa HOM05D007903 ORTHO05D009925 5.1e-17 92.0 161 36.6
Gohir.A09G042700 Gossypium hirsutum HOM05D007903 ORTHO05D009925 5.1e-17 92.0 158 41.1
FvH4_4g27040 Fragaria vesca HOM05D007903 ORTHO05D009925 8.8e-17 91.3 160 36.2
FAN12G1984 Fragaria x ananassa HOM05D007903 ORTHO05D009925 8.8e-17 91.3 160 36.2
PGR119G1971 Punica granatum HOM05D007903 ORTHO05D009925 8.8e-17 91.3 164 41.5
Lalb_Chr06g0165971 Lupinus albus HOM05D007903 ORTHO05D009925 1.5e-16 90.5 161 39.8
Sabra10G0092700 Salix brachista HOM05D007903 ORTHO05D009925 1.5e-16 90.5 163 39.3
RcHm_v2.0_Chr4g0434841 Rosa chinensis HOM05D007903 ORTHO05D009925 3.3e-16 89.4 157 36.9
Sabra08G0093200 Salix brachista HOM05D007903 ORTHO05D009925 3.3e-16 89.4 150 41.3
SalBow8G0258 Salvia bowleyana HOM05D065226 ORTHO05D009925 7.4e-16 88.2 166 42.2
SalBow8G1517 Salvia bowleyana HOM05D065226 ORTHO05D009925 7.4e-16 88.2 166 42.2
FAN17G2767 Fragaria x ananassa HOM05D007903 ORTHO05D009925 9.7e-16 87.8 159 35.2
MD16G1040300 Malus domestica HOM05D007903 ORTHO05D009925 1.3e-15 87.4 156 41.0
Duzib268G0450 Durio zibethinus HOM05D007903 ORTHO05D009925 2.2e-15 86.7 154 39.6
Thhalv10019802m.g Eutrema salsugineum HOM05D007903 ORTHO05D009925 2.2e-15 86.7 161 38.5
Carub.0002s1485 Capsella rubella HOM05D007903 ORTHO05D009925 4.8e-15 85.5 162 40.1
BcaB03g15412 Brassica carinata HOM05D007903 ORTHO05D009925 8.2e-15 84.7 157 39.5
CARHR061060 Cardamine hirsuta HOM05D007903 ORTHO05D009925 8.2e-15 84.7 157 41.4
Lj5g0001705 Lotus japonicus HOM05D007903 ORTHO05D009925 8.2e-15 84.7 150 39.3
COL.COLO4_08991 Corchorus olitorius HOM05D007903 ORTHO05D009925 1.8e-14 83.6 149 41.6
MD13G1039400 Malus domestica HOM05D007903 ORTHO05D009925 1.8e-14 83.6 154 39.6
Sc04g0006190 Simmondsia chinensis HOM05D007903 ORTHO05D009925 2.4e-14 83.2 153 39.9
THA.LOC104821918 Tarenaya hassleriana HOM05D007903 ORTHO05D009925 2.4e-14 83.2 159 35.8
Gorai.006G050300 Gossypium raimondii HOM05D007903 ORTHO05D009925 3.1e-14 82.8 160 39.4
Gohir.D09G043400 Gossypium hirsutum HOM05D007903 ORTHO05D009925 4.1e-14 82.4 160 39.4
AT1G68350 Arabidopsis thaliana HOM05D007903 ORTHO05D009925 6.9e-14 81.6 164 36.6
AL2G27200 Arabidopsis lyrata HOM05D007903 ORTHO05D009925 1.5e-13 80.5 157 39.5
VMungo0720G0077 Vigna mungo HOM05D007903 ORTHO05D009925 3.4e-13 79.3 168 35.7
BcaB05g24366 Brassica carinata HOM05D007903 ORTHO05D009925 5.9e-13 78.6 156 40.4
Sp5g23400 Schrenkiella parvula HOM05D007903 ORTHO05D009925 7.7e-13 78.2 156 37.8
BcaC08g45975 Brassica carinata HOM05D007903 ORTHO05D009925 1.3e-12 77.4 157 36.9
C06p37650 Brassica napus HOM05D007903 ORTHO05D009925 1.3e-12 77.4 157 36.9
BolC6t38868H Brassica oleracea HOM05D007903 ORTHO05D009925 1.3e-12 77.4 157 36.9
CANSAT01G0431 Cannabis sativa HOM05D007903 ORTHO05D009925 1.3e-12 77.4 165 39.4
TWI31G0067 Tripterygium wilfordii HOM05D007903 ORTHO05D009925 1.3e-12 77.4 165 38.2
BraA02t06557Z Brassica rapa HOM05D007903 ORTHO05D009925 1.7e-12 77.0 156 35.9
Dinv31619 Davidia involucrata HOM05D007903 ORTHO05D009925 1.7e-12 77.0 163 41.1
ClCG05G022570 Citrullus lanatus HOM05D007903 ORTHO05D009925 5.0e-12 75.5 140 35.0
Prupe.1G313800 Prunus persica HOM05D007903 ORTHO05D009925 1.9e-11 73.6 169 35.5
EL10Ac6g14355 Beta vulgaris HOM05D007903 ORTHO05D009925 4.2e-11 72.4 152 39.5
Phvul.007G029300 Phaseolus vulgaris HOM05D007903 ORTHO05D009925 3.6e-10 69.3 152 38.2
Sed0015064 Sechium edule HOM05D007903 ORTHO05D009925 4.7e-10 68.9 147 34.0
Glyma.20G117500 Glycine max HOM05D007903 ORTHO05D009925 1.8e-09 67.0 162 37.7
ATR1125G087 Amborella trichopoda HOM05D007903 ORTHO05D009925 2.3e-09 66.6 179 31.8
HPP92_004796 Vanilla planifolia HOM05D007903 ORTHO05D009925 2.2e-07 60.1 142 33.8
Eucgr.G02306 Eucalyptus grandis HOM05D007903 ORTHO05D009925 3.7e-07 59.3 175 34.9
Cpa.g.sc65.47 Carica papaya HOM05D007903 ORTHO05D009925 7.0e-06 55.1 147 35.4


User provided reference genes

Program Settings