Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu057684.1 Olea europaea HOM05D002553 ORTHO05D002767 3.4e-189 664.8 335 100.0
Migut.M00920 Erythranthe guttata HOM05D002553 ORTHO05D002767 1.6e-106 390.2 367 58.3
MSTRG.16234 Avicennia marina HOM05D002553 ORTHO05D002767 1.3e-100 370.5 372 57.0
Sopen10g005180 Solanum pennellii HOM05D002553 ORTHO05D002767 6.3e-95 351.7 391 51.7
Solyc10g009400.3 Solanum lycopersicum HOM05D002553 ORTHO05D002767 4.1e-94 349.0 391 51.4
Nitab4.5_0000176g0030 Nicotiana tabacum HOM05D002553 ORTHO05D002767 1.0e-92 344.4 397 50.1
Nitab4.5_0001510g0020 Nicotiana tabacum HOM05D002553 ORTHO05D002767 3.6e-90 335.9 410 48.0
CSS0035336 Camellia sinensis var. sinensis HOM05D002553 ORTHO05D002767 1.8e-89 333.6 398 49.5
Actinidia19805 Actinidia chinensis HOM05D002553 ORTHO05D002767 3.0e-89 332.8 402 49.3
Cc02_g32700 Coffea canephora HOM05D002553 ORTHO05D002767 1.5e-88 330.5 403 48.4
GSVIVG01000009001 Vitis vinifera HOM05D002553 ORTHO05D002767 1.4e-86 323.9 372 51.3
SGA_v2.0_scaffold1G00162 Striga asiatica HOM05D002553 ORTHO05D002767 1.8e-86 323.6 377 50.1
DCAR_029434 Daucus carota HOM05D002553 ORTHO05D002767 1.2e-85 320.9 400 47.5
RcHm_v2.0_Chr3g0454111 Rosa chinensis HOM05D002553 ORTHO05D002767 1.0e-84 317.8 392 46.9
MD04G1209100 Malus domestica HOM05D002553 ORTHO05D002767 4.3e-83 312.4 396 45.7
Peaxi162Scf01441g00005 Petunia axillaris HOM05D002553 ORTHO05D002767 5.6e-83 312.0 486 41.4
Atru.chr2.474 Acer truncatum HOM05D002553 ORTHO05D002767 1.2e-82 310.8 383 47.8
FvH4_6g05341 Fragaria vesca HOM05D002553 ORTHO05D002767 1.2e-82 310.8 392 46.7
Gorai.004G243500 Gossypium raimondii HOM05D002553 ORTHO05D002767 1.6e-82 310.5 402 47.5
Ciclev10003913m.g Citrus clementina HOM05D002553 ORTHO05D002767 2.8e-82 309.7 365 47.7
TWI56G0412 Tripterygium wilfordii HOM05D002553 ORTHO05D002767 6.2e-82 308.5 386 45.6
CiPaw.07G014700 Carya illinoinensis HOM05D002553 ORTHO05D002767 1.1e-81 307.8 419 45.1
FAN02G2444 Fragaria x ananassa HOM05D002553 ORTHO05D002767 3.1e-81 306.2 395 44.6
Gohir.D08G229300 Gossypium hirsutum HOM05D002553 ORTHO05D002767 3.1e-81 306.2 398 47.0
THA.LOC104818678 Tarenaya hassleriana HOM05D002553 ORTHO05D002767 3.1e-81 306.2 363 47.9
CANSAT25G3036 Cannabis sativa HOM05D002553 ORTHO05D002767 1.2e-80 304.3 373 46.9
FAN05G5165 Fragaria x ananassa HOM05D002553 ORTHO05D002767 4.4e-80 302.4 384 46.1
arahy.Tifrunner.gnm1.ann1.Y4B2Z0 Arachis hypogaea HOM05D002553 ORTHO05D002767 5.8e-80 302.0 397 45.3
FAN05G4192 Fragaria x ananassa HOM05D002553 ORTHO05D002767 5.8e-80 302.0 384 46.6
Phvul.006G093922 Phaseolus vulgaris HOM05D002553 ORTHO05D002767 1.7e-79 300.4 396 45.2
arahy.Tifrunner.gnm1.ann1.NG2XET Arachis hypogaea HOM05D002553 ORTHO05D002767 2.9e-79 299.7 379 45.6
Duzib177G0165 Durio zibethinus HOM05D002553 ORTHO05D002767 2.9e-79 299.7 413 42.4
HanXRQChr14g0445961 Helianthus annuus HOM05D002553 ORTHO05D002767 3.7e-79 299.3 370 45.7
ECA238G2267 Erigeron canadensis HOM05D002553 ORTHO05D002767 4.9e-79 298.9 386 46.6
Rhsim05G0144400 Rhododendron simsii HOM05D002553 ORTHO05D002767 4.9e-79 298.9 405 44.9
Glyma.19G237200 Glycine max HOM05D002553 ORTHO05D002767 6.4e-79 298.5 396 45.2
Psat3g010200 Pisum sativum HOM05D002553 ORTHO05D002767 8.3e-79 298.1 389 44.5
Lj1g0019778 Lotus japonicus HOM05D002553 ORTHO05D002767 1.1e-78 297.7 393 45.0
Sc09g0003350 Simmondsia chinensis HOM05D002553 ORTHO05D002767 1.1e-78 297.7 390 45.1
BcaNung04367 Brassica carinata HOM05D002553 ORTHO05D002767 5.4e-78 295.4 372 46.5
Lalb_Chr15g0077101 Lupinus albus HOM05D002553 ORTHO05D002767 2.0e-77 293.5 400 44.0
AL6G39610 Arabidopsis lyrata HOM05D002553 ORTHO05D002767 4.6e-77 292.4 371 46.4
Potri.005G039000 Populus trichocarpa HOM05D002553 ORTHO05D002767 1.0e-76 291.2 422 42.9
Carub.0006s2514 Capsella rubella HOM05D002553 ORTHO05D002767 1.3e-76 290.8 371 45.8
Ca_09373_v3 Cicer arietinum L. HOM05D002553 ORTHO05D002767 1.3e-76 290.8 386 45.1
PGSC0003DMG400018888 Solanum tuberosum HOM05D002553 ORTHO05D002767 1.3e-76 290.8 387 47.0
QL03p004484 Quercus lobata HOM05D002553 ORTHO05D002767 1.7e-76 290.4 465 40.0
BcaNung02464 Brassica carinata HOM05D002553 ORTHO05D002767 5.0e-76 288.9 362 46.1
Thecc.05G308100 Theobroma cacao HOM05D002553 ORTHO05D002767 6.6e-76 288.5 412 42.2
Manes.09G163850 Manihot esculenta HOM05D002553 ORTHO05D002767 8.6e-76 288.1 428 43.9
CARHR186000 Cardamine hirsuta HOM05D002553 ORTHO05D002767 1.5e-75 287.3 373 46.4
PGR031G3980 Punica granatum HOM05D002553 ORTHO05D002767 1.5e-75 287.3 358 47.8
Haze_04234 Corylus avellana HOM05D002553 ORTHO05D002767 3.3e-75 286.2 393 45.5
Phvul.006G093933 Phaseolus vulgaris HOM05D002553 ORTHO05D002767 9.5e-75 284.6 397 43.8
AT5G27400 Arabidopsis thaliana HOM05D002553 ORTHO05D002767 6.2e-74 282.0 371 45.3
Cfa006549 Carpinus fangiana HOM05D002553 ORTHO05D002767 6.2e-74 282.0 400 44.2
Lsat_1_v5_gn_2_67941 Lactuca sativa HOM05D002553 ORTHO05D002767 1.4e-73 280.8 344 46.8
Medtr7g113850 Medicago truncatula HOM05D002553 ORTHO05D002767 4.0e-73 279.3 379 44.1
C07p40730 Brassica napus HOM05D002553 ORTHO05D002767 2.0e-72 276.9 357 46.2
BolC7t44601H Brassica oleracea HOM05D002553 ORTHO05D002767 2.0e-72 276.9 357 46.2
FAN14G0929 Fragaria x ananassa HOM05D002553 ORTHO05D002767 2.0e-72 276.9 366 45.4
Sp2g20630 Schrenkiella parvula HOM05D002553 ORTHO05D002767 3.4e-72 276.2 362 43.9
Aa31LG11G9180 Aethionema arabicum HOM05D002553 ORTHO05D002767 4.4e-72 275.8 358 45.3
VMungo0540G2049 Vigna mungo HOM05D002553 ORTHO05D002767 1.3e-71 274.2 388 43.3
A06p37580 Brassica napus HOM05D002553 ORTHO05D002767 1.7e-71 273.9 368 46.2
BraA06t26677Z Brassica rapa HOM05D002553 ORTHO05D002767 1.7e-71 273.9 368 46.2
AT5G27410 Arabidopsis thaliana HOM05D002553 ORTHO05D002767 3.2e-70 269.6 359 45.4
Lj7C475G4 Lonicera japonica HOM05D002553 ORTHO05D002767 9.2e-70 268.1 344 45.6
AUR62000868 Chenopodium quinoa HOM05D002553 ORTHO05D002767 1.6e-69 267.3 392 41.8
Thhalv10003627m.g Eutrema salsugineum HOM05D002553 ORTHO05D002767 7.8e-69 265.0 354 45.8
PSO832G1112 Papaver somniferum HOM05D002553 ORTHO05D002767 1.3e-68 264.2 418 41.6
PSO210G0829 Papaver somniferum HOM05D002553 ORTHO05D002767 1.1e-67 261.2 418 40.7
TPR.G33193 Trifolium pratense HOM05D002553 ORTHO05D002767 1.5e-67 260.8 360 43.3
Dinv40259 Davidia involucrata HOM05D002553 ORTHO05D002767 5.6e-67 258.8 259 56.4
COL.COLO4_13516 Corchorus olitorius HOM05D002553 ORTHO05D002767 2.1e-66 256.9 338 45.9
CDE08G1662 Ceratophyllum demersum HOM05D002553 ORTHO05D002767 1.4e-65 254.2 383 40.7
EL10Ac4g09309 Beta vulgaris HOM05D002553 ORTHO05D002767 1.8e-65 253.8 358 42.7
Aqoxy1G02454 Aquilegia oxysepala HOM05D002553 ORTHO05D002767 1.5e-64 250.8 420 38.6
Hund07046 Selenicereus undatus HOM05D002553 ORTHO05D002767 5.8e-64 248.8 378 42.1
Cpa.g.sc48.13 Carica papaya HOM05D002553 ORTHO05D002767 1.3e-63 247.7 334 46.4
Hma1.2p1_0666F.1_g199460 Hydrangea macrophylla HOM05D002553 ORTHO05D002767 3.8e-63 246.1 283 53.4
Prupe.6G330100 Prunus persica HOM05D002553 ORTHO05D002767 3.2e-62 243.0 345 41.7
Sabra05G0037600 Salix brachista HOM05D002553 ORTHO05D002767 1.6e-61 240.7 566 32.2
Nn1g02088 Nelumbo nucifera HOM05D002553 ORTHO05D002767 6.0e-61 238.8 377 40.8
ClCG02G016020 Citrullus lanatus HOM05D002553 ORTHO05D002767 6.6e-60 235.3 401 39.4
ATR0626G345 Amborella trichopoda HOM05D002553 ORTHO05D002767 1.2e-58 231.1 431 37.1
TAR633G1107 Trochodendron aralioides HOM05D002553 ORTHO05D002767 2.6e-56 223.4 366 39.9
HPP92_017205 Vanilla planifolia HOM05D002553 ORTHO05D002767 5.4e-54 215.7 375 37.6
AUR62005108 Chenopodium quinoa HOM05D002553 ORTHO05D002767 4.6e-53 212.6 336 40.5
Gohir.A08G212300 Gossypium hirsutum HOM05D002553 ORTHO05D002767 1.6e-50 204.1 309 43.4
unitig_32.g11004 Utricularia gibba HOM05D002553 ORTHO05D002767 1.5e-48 197.6 330 41.2
Zm00001eb417780 Zea mays HOM05D002553 ORTHO05D002767 4.5e-48 196.1 360 37.8
MBI17_g29610_MAGBIO Magnolia biondii HOM05D002553 ORTHO05D002767 1.3e-47 194.5 382 35.9
vmacro19643 Vaccinium macrocarpon HOM05D002553 ORTHO05D002767 2.3e-44 183.7 196 52.6
vmacro19642 Vaccinium macrocarpon HOM05D002553 ORTHO05D002767 1.3e-36 157.9 221 44.3
Pp3c27_4830 Physcomitrium patens HOM05D002553 ORTHO05D002767 3.0e-36 156.8 366 32.0
Mapoly0153s0022 Marchantia polymorpha HOM05D002553 ORTHO05D002767 3.7e-34 149.8 391 30.7
Sed0024851 Sechium edule HOM05D002553 ORTHO05D002767 6.9e-33 145.6 268 38.1
SalBow8G2918 Salvia bowleyana HOM05D002553 ORTHO05D002767 1.3e-31 141.4 178 46.1
CAN.G271.7 Capsicum annuum HOM05D002553 ORTHO05D002767 4.6e-29 132.9 101 63.4
CSS0010777 Camellia sinensis var. sinensis HOM05D002553 ORTHO05D002767 3.0e-28 130.2 103 64.1
SMO307G0066 Selaginella moellendorffii HOM05D002553 ORTHO05D002767 6.7e-28 129.0 351 29.1
CAN.G271.6 Capsicum annuum HOM05D000541 ORTHO05D000137 7.4e-27 125.6 159 46.5
Glyma.03G240200 Glycine max HOM05D002553 ORTHO05D002767 1.5e-24 117.9 163 40.5
CSS0028745 Camellia sinensis var. sinensis HOM05D002553 ORTHO05D002767 3.7e-18 96.7 135 45.2
Pp3c6_24550 Physcomitrium patens HOM05D002553 ORTHO05D002767 6.3e-18 95.9 314 29.3
SEGI_18575 Sequoiadendron giganteum HOM05D002553 ORTHO05D002767 1.4e-17 94.7 153 35.9
AagrBONN_evm.TU.Sc2ySwM_368.1399 Anthoceros agrestis HOM05D002553 ORTHO05D002767 5.7e-11 72.8 148 30.4
Os05g0143200 Oryza sativa ssp. japonica HOM05D002553 ORTHO05D002767 7.4e-11 72.4 86 45.3


User provided reference genes

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