Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu057608.1 Olea europaea HOM05D004793 ORTHO05D004423 1.6e-55 219.2 112 100.0
Oeu064364.1 Olea europaea HOM05D004793 ORTHO05D004423 1.6e-55 219.2 112 100.0
Oeu029974.1 Olea europaea HOM05D027131 ORTHO05D013900 4.4e-24 114.8 98 67.3
Thecc.01G191000 Theobroma cacao HOM05D004793 ORTHO05D004423 2.6e-16 89.0 129 48.8
Atru.chr6.3360 Acer truncatum HOM05D004793 ORTHO05D004423 4.1e-14 81.6 135 42.2
TAR627G0453 Trochodendron aralioides HOM05D004793 ORTHO05D004423 4.1e-14 81.6 126 46.8
Migut.M00035 Erythranthe guttata HOM05D004793 ORTHO05D004423 5.3e-14 81.3 127 49.6
Gohir.A07G190700 Gossypium hirsutum HOM05D004793 ORTHO05D004423 7.0e-14 80.9 127 44.9
Manes.13G062900 Manihot esculenta HOM05D004793 ORTHO05D004423 2.7e-13 79.0 128 45.3
Gohir.D07G197000 Gossypium hirsutum HOM05D004793 ORTHO05D004423 4.5e-13 78.2 123 44.7
Gorai.001G220800 Gossypium raimondii HOM05D004793 ORTHO05D004423 4.5e-13 78.2 123 44.7
Lalb_Chr04g0247291 Lupinus albus HOM05D004793 ORTHO05D004423 5.9e-13 77.8 117 42.7
Lalb_Chr04g0247481 Lupinus albus HOM05D004793 ORTHO05D004423 5.9e-13 77.8 117 42.7
Hma1.2p1_0133F.1_g061430 Hydrangea macrophylla HOM05D004793 ORTHO05D004423 7.7e-13 77.4 129 42.6
Hma1.2p1_1825F.1_g304390 Hydrangea macrophylla HOM05D004793 ORTHO05D004423 7.7e-13 77.4 129 42.6
MSTRG.6642 Avicennia marina HOM05D004793 ORTHO05D004423 1.0e-12 77.0 121 47.9
CiPaw.03G278900 Carya illinoinensis HOM05D004793 ORTHO05D004423 1.3e-12 76.6 129 41.9
Duzib138G1142 Durio zibethinus HOM05D004793 ORTHO05D004423 1.7e-12 76.3 129 42.6
Cpa.g.sc211.5 Carica papaya HOM05D004793 ORTHO05D004423 3.8e-12 75.1 139 43.2
COL.COLO4_08493 Corchorus olitorius HOM05D004793 ORTHO05D004423 3.8e-12 75.1 139 38.1
Medtr5g097300 Medicago truncatula HOM05D004793 ORTHO05D004423 3.8e-12 75.1 118 43.2
TPR.G1320 Trifolium pratense HOM05D004793 ORTHO05D004423 3.8e-12 75.1 117 42.7
Psat2g004520 Pisum sativum HOM05D004793 ORTHO05D004423 6.5e-12 74.3 125 44.8
SalBow7G3719 Salvia bowleyana HOM05D004793 ORTHO05D004423 8.5e-12 73.9 125 46.4
Ciclev10017917m.g Citrus clementina HOM05D004793 ORTHO05D004423 1.1e-11 73.6 132 44.7
Nn1g07451 Nelumbo nucifera HOM05D004793 ORTHO05D004423 1.5e-11 73.2 128 42.2
Manes.12G061300 Manihot esculenta HOM05D004793 ORTHO05D004423 1.9e-11 72.8 127 42.5
Glyma.14G007800 Glycine max HOM05D004793 ORTHO05D004423 2.5e-11 72.4 123 40.7
QL08p028591 Quercus lobata HOM05D004793 ORTHO05D004423 2.5e-11 72.4 128 41.4
Sabra14G0125700 Salix brachista HOM05D004793 ORTHO05D004423 5.5e-11 71.2 140 40.0
FvH4_6g41090 Fragaria vesca HOM05D004793 ORTHO05D004423 1.2e-10 70.1 131 38.9
FAN14G5076 Fragaria x ananassa HOM05D004793 ORTHO05D004423 1.2e-10 70.1 131 38.9
Ca_06456_v3 Cicer arietinum L. HOM05D004793 ORTHO05D004423 2.1e-10 69.3 125 41.6
CSS0020838 Camellia sinensis var. sinensis HOM05D004793 ORTHO05D004423 2.7e-10 68.9 131 40.5
CSS0047668 Camellia sinensis var. sinensis HOM05D004793 ORTHO05D004423 2.7e-10 68.9 131 40.5
Glyma.02G305500 Glycine max HOM05D004793 ORTHO05D004423 3.6e-10 68.6 128 39.1
RcHm_v2.0_Chr2g0156651 Rosa chinensis HOM05D004793 ORTHO05D004423 4.7e-10 68.2 130 36.9
Potri.001G362000 Populus trichocarpa HOM05D004793 ORTHO05D004423 6.1e-10 67.8 128 38.3
Prupe.3G201300 Prunus persica HOM05D004793 ORTHO05D004423 6.1e-10 67.8 143 37.8
Lsat_1_v5_gn_5_121620 Lactuca sativa HOM05D004793 ORTHO05D004423 1.0e-09 67.0 130 39.2
Manes.03G138300 Manihot esculenta HOM05D004793 ORTHO05D004423 1.0e-09 67.0 128 37.5
Potri.014G165000 Populus trichocarpa HOM05D004793 ORTHO05D004423 1.0e-09 67.0 148 38.5
Eucgr.A01045 Eucalyptus grandis HOM05D004793 ORTHO05D004423 1.4e-09 66.6 139 33.8
GSVIVG01037785001 Vitis vinifera HOM05D004793 ORTHO05D004423 1.4e-09 66.6 127 40.9
Gorai.001G099200 Gossypium raimondii HOM05D004793 ORTHO05D004423 1.8e-09 66.2 122 42.6
Gohir.D07G092600 Gossypium hirsutum HOM05D004793 ORTHO05D004423 3.0e-09 65.5 122 42.6
Nn1g03234 Nelumbo nucifera HOM05D004793 ORTHO05D004423 3.0e-09 65.5 127 43.3
Thecc.07G019600 Theobroma cacao HOM05D004793 ORTHO05D004423 4.0e-09 65.1 128 41.4
Cc02_g34950 Coffea canephora HOM05D004793 ORTHO05D004423 5.2e-09 64.7 141 38.3
Gohir.A07G087700 Gossypium hirsutum HOM05D004793 ORTHO05D004423 5.2e-09 64.7 122 41.8
LjContig00081g0018270 Lotus japonicus HOM05D004793 ORTHO05D004423 5.2e-09 64.7 132 37.9
Lsat_1_v5_gn_7_95461 Lactuca sativa HOM05D004793 ORTHO05D004423 1.5e-08 63.2 111 40.5
TWI36G0659 Tripterygium wilfordii HOM05D004793 ORTHO05D004423 1.5e-08 63.2 133 39.1
Cfa020226 Carpinus fangiana HOM05D004793 ORTHO05D004423 2.0e-08 62.8 118 40.7
ECA234G3783 Erigeron canadensis HOM05D004793 ORTHO05D004423 2.0e-08 62.8 158 34.2
Manes.15G062700 Manihot esculenta HOM05D004793 ORTHO05D004423 2.6e-08 62.4 128 37.5
DCAR_019706 Daucus carota HOM05D004793 ORTHO05D004423 3.4e-08 62.0 126 38.1
VMungo0647G0475 Vigna mungo HOM05D004793 ORTHO05D004423 3.4e-08 62.0 143 37.1
Aqoxy4G02224 Aquilegia oxysepala HOM05D004793 ORTHO05D004423 4.4e-08 61.6 49 69.4
HPP92_012227 Vanilla planifolia HOM05D004793 ORTHO05D004423 4.4e-08 61.6 114 42.1
Oeu063642.1 Olea europaea HOM05D004793 ORTHO05D004423 5.7e-08 61.2 58 58.6
Sed0008787 Sechium edule HOM05D004793 ORTHO05D004423 5.7e-08 61.2 126 37.3
Rhsim04G0014600 Rhododendron simsii HOM05D004793 ORTHO05D004423 7.5e-08 60.8 116 42.2
MSTRG.14923 Avicennia marina HOM05D004793 ORTHO05D004423 9.8e-08 60.5 128 39.8
Phvul.008G285200 Phaseolus vulgaris HOM05D004793 ORTHO05D004423 9.8e-08 60.5 125 37.6
Haze_09795 Corylus avellana HOM05D004793 ORTHO05D004423 1.3e-07 60.1 118 39.8
Lalb_Chr15g0088081 Lupinus albus HOM05D004793 ORTHO05D004423 1.7e-07 59.7 148 33.8
QL05p068371 Quercus lobata HOM05D004793 ORTHO05D004423 2.2e-07 59.3 138 34.8
Cc09_g04750 Coffea canephora HOM05D004793 ORTHO05D004423 2.8e-07 58.9 138 37.0
Phvul.006G141500 Phaseolus vulgaris HOM05D004793 ORTHO05D004423 2.8e-07 58.9 59 55.9
SGA_v2.0_scaffold73G24508 Striga asiatica HOM05D004793 ORTHO05D004423 2.8e-07 58.9 120 43.3
HPP92_014035 Vanilla planifolia HOM05D004793 ORTHO05D004423 2.8e-07 58.9 120 37.5
Eucgr.K00650 Eucalyptus grandis HOM05D004793 ORTHO05D004423 3.7e-07 58.5 133 36.8
Lj6g0021600 Lotus japonicus HOM05D004793 ORTHO05D004423 3.7e-07 58.5 136 37.5
Sc17g0007950 Simmondsia chinensis HOM05D004793 ORTHO05D004423 4.8e-07 58.2 135 33.3
CSS0019001 Camellia sinensis var. sinensis HOM05D004793 ORTHO05D004423 6.3e-07 57.8 135 37.0
Medtr2g026510 Medicago truncatula HOM05D004793 ORTHO05D004423 6.3e-07 57.8 52 61.5
Cpa.g.sc2750.2 Carica papaya HOM05D004793 ORTHO05D004423 1.1e-06 57.0 128 38.3
Potri.016G009200 Populus trichocarpa HOM05D004793 ORTHO05D004423 1.1e-06 57.0 56 57.1
CiPaw.11G201300 Carya illinoinensis HOM05D004793 ORTHO05D004423 1.4e-06 56.6 130 38.5
Glyma.15G116700 Glycine max HOM05D004793 ORTHO05D004423 1.4e-06 56.6 54 59.3
Gohir.A01G087700 Gossypium hirsutum HOM05D004793 ORTHO05D004423 1.4e-06 56.6 123 38.2
QL05p068872 Quercus lobata HOM05D004793 ORTHO05D004423 1.4e-06 56.6 138 34.8
Rhsim06G0174500 Rhododendron simsii HOM05D003210 ORTHO05D000001 1.4e-06 56.6 118 39.0
Actinidia21442 Actinidia chinensis HOM05D004793 ORTHO05D004423 2.4e-06 55.8 46 60.9
Gohir.D01G074100 Gossypium hirsutum HOM05D004793 ORTHO05D004423 2.4e-06 55.8 123 39.0
Psat1g178240 Pisum sativum HOM05D004793 ORTHO05D004423 2.4e-06 55.8 48 60.4
Prupe.4G234900 Prunus persica HOM05D004793 ORTHO05D004423 2.4e-06 55.8 139 40.3
CiPaw.10G079700 Carya illinoinensis HOM05D004793 ORTHO05D004423 3.1e-06 55.5 145 33.8
Rhsim04G0038500 Rhododendron simsii HOM05D004793 ORTHO05D004423 3.1e-06 55.5 120 41.7
CANSAT56G2188 Cannabis sativa HOM05D004793 ORTHO05D004423 4.1e-06 55.1 47 59.6
Haze_06976 Corylus avellana HOM05D004793 ORTHO05D004423 4.1e-06 55.1 45 60.0
Glyma.09G012000 Glycine max HOM05D004793 ORTHO05D004423 4.1e-06 55.1 52 59.6
FAN16G3200 Fragaria x ananassa HOM05D017646 ORTHO05D004423 5.4e-06 54.7 119 37.0
TPR.G10593 Trifolium pratense HOM05D004793 ORTHO05D004423 5.4e-06 54.7 52 57.7
RcHm_v2.0_Chr5g0042781 Rosa chinensis HOM05D017646 ORTHO05D004423 7.0e-06 54.3 117 37.6
Solyc07g047827.1 Solanum lycopersicum HOM05D037802 ORTHO05D004423 7.0e-06 54.3 129 34.9
CSS0013569 Camellia sinensis var. sinensis HOM05D004793 ORTHO05D004423 9.1e-06 53.9 120 36.7
FvH4_3g24120 Fragaria vesca HOM05D017646 ORTHO05D004423 9.1e-06 53.9 119 36.1
FAN11G0385 Fragaria x ananassa HOM05D017646 ORTHO05D004423 9.1e-06 53.9 119 36.1
FAN25G0781 Fragaria x ananassa HOM05D017646 ORTHO05D004423 9.1e-06 53.9 119 36.1
FAN25G3449 Fragaria x ananassa HOM05D017646 ORTHO05D004423 9.1e-06 53.9 119 36.1
Lj2P260T34 Lonicera japonica HOM05D004793 ORTHO05D004423 9.1e-06 53.9 55 49.1


User provided reference genes

Program Settings