Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu057587.1 Olea europaea HOM05D005910 ORTHO05D007088 1.7e-100 369.4 194 100.0
Dinv16345 Davidia involucrata HOM05D005910 ORTHO05D007088 4.8e-87 324.7 194 86.1
Cc06_g15530 Coffea canephora HOM05D005910 ORTHO05D007088 2.4e-86 322.4 194 86.1
SGA_v2.0_scaffold69G23042 Striga asiatica HOM05D005910 ORTHO05D007088 4.1e-86 321.6 197 86.3
Migut.J01866 Erythranthe guttata HOM05D005910 ORTHO05D007088 1.5e-85 319.7 197 85.3
DCAR_019862 Daucus carota HOM05D005910 ORTHO05D007088 2.6e-85 318.9 195 86.7
MSTRG.19925 Avicennia marina HOM05D005910 ORTHO05D007088 1.0e-84 317.0 188 88.3
Solyc10g079000.1 Solanum lycopersicum HOM05D005910 ORTHO05D007088 1.7e-84 316.2 189 85.7
Sopen10g029620 Solanum pennellii HOM05D005910 ORTHO05D007088 1.7e-84 316.2 189 85.7
PGSC0003DMG400011451 Solanum tuberosum HOM05D005910 ORTHO05D007088 1.7e-84 316.2 189 85.7
Hma1.2p1_0124F.1_g058350 Hydrangea macrophylla HOM05D005910 ORTHO05D007088 3.8e-84 315.1 194 84.5
CSS0007798 Camellia sinensis var. sinensis HOM05D005910 ORTHO05D007088 1.4e-83 313.2 194 83.5
unitig_26.g10040 Utricularia gibba HOM05D005910 ORTHO05D007088 2.5e-83 312.4 198 81.8
Rhsim04G0093900 Rhododendron simsii HOM05D005910 ORTHO05D007088 2.1e-82 309.3 197 82.7
AL6G16750 Arabidopsis lyrata HOM05D005910 ORTHO05D007088 3.6e-82 308.5 191 83.8
Rhsim04G0095300 Rhododendron simsii HOM05D005910 ORTHO05D007088 3.6e-82 308.5 197 82.7
BcaC09g48209 Brassica carinata HOM05D005910 ORTHO05D007088 4.7e-82 308.1 190 82.6
Thhalv10022159m.g Eutrema salsugineum HOM05D005910 ORTHO05D007088 4.7e-82 308.1 190 82.6
Actinidia17287 Actinidia chinensis HOM05D005910 ORTHO05D007088 7.9e-82 307.4 193 81.9
CAN.G960.19 Capsicum annuum HOM05D005910 ORTHO05D007088 1.0e-81 307.0 194 84.0
CARHR206550 Cardamine hirsuta HOM05D005910 ORTHO05D007088 1.0e-81 307.0 191 83.2
BraA01t04144Z Brassica rapa HOM05D005910 ORTHO05D007088 1.4e-81 306.6 190 82.1
AT5G06660 Arabidopsis thaliana HOM05D005910 ORTHO05D007088 1.8e-81 306.2 191 83.8
BolC1t05270H Brassica oleracea HOM05D005910 ORTHO05D007088 1.8e-81 306.2 190 82.1
Sp3g10260 Schrenkiella parvula HOM05D005910 ORTHO05D007088 3.9e-81 305.1 190 82.1
AL3G23640 Arabidopsis lyrata HOM05D005910 ORTHO05D007088 5.1e-81 304.7 191 82.7
Carub.0006s0554 Capsella rubella HOM05D005910 ORTHO05D007088 8.8e-81 303.9 191 82.7
AT3G12030 Arabidopsis thaliana HOM05D005910 ORTHO05D007088 1.5e-80 303.1 191 82.2
Manes.09G037701 Manihot esculenta HOM05D005910 ORTHO05D007088 1.5e-80 303.1 189 84.7
Sp6g36210 Schrenkiella parvula HOM05D005910 ORTHO05D007088 2.0e-80 302.8 191 82.7
THA.LOC104799285 Tarenaya hassleriana HOM05D005910 ORTHO05D007088 2.0e-80 302.8 191 81.7
Carub.0003s1137 Capsella rubella HOM05D005910 ORTHO05D007088 2.6e-80 302.4 191 81.7
Lsat_1_v5_gn_2_56160 Lactuca sativa HOM05D005910 ORTHO05D007088 2.6e-80 302.4 193 82.9
GSVIVG01033465001 Vitis vinifera HOM05D005910 ORTHO05D007088 2.6e-80 302.4 192 82.8
CARHR086590 Cardamine hirsuta HOM05D005910 ORTHO05D007088 3.3e-80 302.0 191 82.2
MD12G1054500 Malus domestica HOM05D005910 ORTHO05D007088 3.3e-80 302.0 193 81.3
Peaxi162Scf00463g00044 Petunia axillaris HOM05D005910 ORTHO05D007088 3.3e-80 302.0 194 81.4
Actinidia38597 Actinidia chinensis HOM05D005910 ORTHO05D007088 4.4e-80 301.6 193 80.3
Aa31LG3G5420 Aethionema arabicum HOM05D005910 ORTHO05D007088 9.7e-80 300.4 191 81.2
BcaB04g21099 Brassica carinata HOM05D005910 ORTHO05D007088 9.7e-80 300.4 192 80.7
FAN05G0623 Fragaria x ananassa HOM05D005910 ORTHO05D007088 1.3e-79 300.1 191 83.2
FAN14G5103 Fragaria x ananassa HOM05D005910 ORTHO05D007088 1.3e-79 300.1 191 83.2
Cpa.g.sc85.46 Carica papaya HOM05D005910 ORTHO05D007088 1.7e-79 299.7 194 81.4
Sed0016712 Sechium edule HOM05D005910 ORTHO05D007088 1.7e-79 299.7 191 82.7
Thhalv10016091m.g Eutrema salsugineum HOM05D005910 ORTHO05D007088 2.2e-79 299.3 191 81.2
FvH4_6g21840 Fragaria vesca HOM05D005910 ORTHO05D007088 2.8e-79 298.9 191 82.7
Nitab4.5_0009361g0020 Nicotiana tabacum HOM05D005910 ORTHO05D007088 3.7e-79 298.5 194 78.9
RcHm_v2.0_Chr3g0479191 Rosa chinensis HOM05D005910 ORTHO05D007088 3.7e-79 298.5 191 83.2
FAN02G0902 Fragaria x ananassa HOM05D005910 ORTHO05D007088 6.3e-79 297.7 191 82.7
CiPaw.09G028200 Carya illinoinensis HOM05D005910 ORTHO05D007088 1.1e-78 297.0 190 82.1
ClCG10G017690 Citrullus lanatus HOM05D005910 ORTHO05D007088 1.8e-78 296.2 190 81.6
CiPaw.10G025100 Carya illinoinensis HOM05D005910 ORTHO05D007088 2.4e-78 295.8 190 81.6
Gohir.D09G124900 Gossypium hirsutum HOM05D005910 ORTHO05D007088 2.4e-78 295.8 188 81.9
Gorai.006G143800 Gossypium raimondii HOM05D005910 ORTHO05D007088 2.4e-78 295.8 188 81.9
Atru.chr8.1156 Acer truncatum HOM05D005910 ORTHO05D007088 3.1e-78 295.4 194 80.4
Nitab4.5_0000009g0230 Nicotiana tabacum HOM05D005910 ORTHO05D007088 4.1e-78 295.0 194 78.4
CANSAT64G0849 Cannabis sativa HOM05D005910 ORTHO05D007088 5.3e-78 294.7 191 81.7
Psat3g091080 Pisum sativum HOM05D005910 ORTHO05D007088 5.3e-78 294.7 189 83.6
Glyma.16G043900 Glycine max HOM05D005910 ORTHO05D007088 9.1e-78 293.9 190 82.6
Gohir.A09G128900 Gossypium hirsutum HOM05D005910 ORTHO05D007088 9.1e-78 293.9 188 81.4
Thecc.05G175100 Theobroma cacao HOM05D005910 ORTHO05D007088 9.1e-78 293.9 188 81.4
MELO3C009607.2 Cucumis melo HOM05D005910 ORTHO05D007088 1.6e-77 293.1 190 80.5
Ca_08246_v3 Cicer arietinum L. HOM05D005910 ORTHO05D007088 2.6e-77 292.4 189 83.1
Medtr7g085050 Medicago truncatula HOM05D005910 ORTHO05D007088 2.6e-77 292.4 189 83.1
COL.COLO4_29362 Corchorus olitorius HOM05D005910 ORTHO05D007088 3.5e-77 292.0 188 80.3
TWI77G0716 Tripterygium wilfordii HOM05D005910 ORTHO05D007088 3.5e-77 292.0 191 79.6
Duzib106G1486 Durio zibethinus HOM05D005910 ORTHO05D007088 4.5e-77 291.6 188 80.9
QL07p024560 Quercus lobata HOM05D005910 ORTHO05D007088 4.5e-77 291.6 196 78.6
TPR.G5912 Trifolium pratense HOM05D005910 ORTHO05D007088 4.5e-77 291.6 189 83.1
Prupe.7G082200 Prunus persica HOM05D005910 ORTHO05D007088 5.9e-77 291.2 195 81.0
Lalb_Chr22g0359441 Lupinus albus HOM05D005910 ORTHO05D007088 7.7e-77 290.8 189 81.0
Phvul.001G097100 Phaseolus vulgaris HOM05D005910 ORTHO05D007088 7.7e-77 290.8 189 82.0
AUR62012008 Chenopodium quinoa HOM05D005910 ORTHO05D007088 1.0e-76 290.4 194 79.9
TAR623G1561 Trochodendron aralioides HOM05D005910 ORTHO05D007088 1.0e-76 290.4 192 79.7
VMungo1383G3424 Vigna mungo HOM05D005910 ORTHO05D007088 1.0e-76 290.4 189 82.0
Glyma.19G108300 Glycine max HOM05D005910 ORTHO05D007088 2.9e-76 288.9 189 81.5
Lj1g0011929 Lotus japonicus HOM05D005910 ORTHO05D007088 3.8e-76 288.5 189 81.0
Lalb_Chr14g0364291 Lupinus albus HOM05D005910 ORTHO05D007088 3.8e-76 288.5 189 81.5
AUR62015329 Chenopodium quinoa HOM05D005910 ORTHO05D007088 8.5e-76 287.3 194 77.8
PGR142G2565 Punica granatum HOM05D005910 ORTHO05D007088 1.1e-75 287.0 186 82.8
Manes.08G042400 Manihot esculenta HOM05D005910 ORTHO05D007088 1.5e-75 286.6 188 80.9
TAR369G0766 Trochodendron aralioides HOM05D005910 ORTHO05D007088 3.2e-75 285.4 192 77.6
Aqoxy7G00427 Aquilegia oxysepala HOM05D005910 ORTHO05D007088 4.2e-75 285.0 189 80.4
Sc13g0002410 Simmondsia chinensis HOM05D005910 ORTHO05D007088 4.2e-75 285.0 194 75.8
PSO478G2464 Papaver somniferum HOM05D005910 ORTHO05D007088 7.2e-75 284.3 195 78.5
EL10Ac3g06882 Beta vulgaris HOM05D005910 ORTHO05D007088 9.4e-75 283.9 194 77.3
ECA238G3575 Erigeron canadensis HOM05D005910 ORTHO05D007088 6.7e-73 277.7 193 77.7
HanXRQChr14g0438251 Helianthus annuus HOM05D005910 ORTHO05D007088 3.3e-72 275.4 190 78.4
Haze_20022 Corylus avellana HOM05D005910 ORTHO05D007088 1.3e-71 273.5 190 77.4
Haze_20025 Corylus avellana HOM05D005910 ORTHO05D007088 1.3e-71 273.5 190 77.4
CsaV3_3G038630 Cucumis sativus L. HOM05D005910 ORTHO05D007088 6.3e-71 271.2 175 80.6
Potri.016G060300 Populus trichocarpa HOM05D005910 ORTHO05D007088 1.8e-70 269.6 189 78.3
Lsat_1_v5_gn_6_36581 Lactuca sativa HOM05D005910 ORTHO05D007088 3.1e-70 268.9 179 78.2
vmacro22120 Vaccinium macrocarpon HOM05D005910 ORTHO05D007088 9.1e-70 267.3 174 81.6
ATR0598G129 Amborella trichopoda HOM05D005910 ORTHO05D007088 1.0e-68 263.8 185 74.6
Cfa020141 Carpinus fangiana HOM05D005910 ORTHO05D007088 5.0e-68 261.5 190 74.2
Sed0026900 Sechium edule HOM05D005910 ORTHO05D007088 6.5e-68 261.2 194 74.2
Mapoly0107s0023 Marchantia polymorpha HOM05D005910 ORTHO05D007088 4.2e-67 258.5 185 71.4
Pp3c21_11350 Physcomitrium patens HOM05D005910 ORTHO05D007088 4.2e-67 258.5 183 72.7
HPP92_021275 Vanilla planifolia HOM05D005910 ORTHO05D007088 4.2e-67 258.5 197 68.0
HanXRQChr03g0075461 Helianthus annuus HOM05D005910 ORTHO05D007088 9.4e-67 257.3 195 72.8
SHI31753 Sapria himalayana HOM05D005910 ORTHO05D007088 6.1e-66 254.6 185 73.0
AagrBONN_evm.TU.Sc2ySwM_117.1513 Anthoceros agrestis HOM05D005910 ORTHO05D007088 5.7e-64 248.1 190 67.9
Zm00001eb055560 Zea mays HOM05D005910 ORTHO05D007088 3.5e-61 238.8 201 63.7
Zm00001eb215980 Zea mays HOM05D005910 ORTHO05D007088 5.9e-61 238.0 203 63.1
SMO367G0437 Selaginella moellendorffii HOM05D005910 ORTHO05D007088 2.9e-60 235.7 186 68.3
Os03g0721400 Oryza sativa ssp. japonica HOM05D005910 ORTHO05D007088 8.5e-60 234.2 211 60.7
CBR_g49549 Chara braunii HOM05D005910 ORTHO05D007088 5.2e-57 224.9 186 61.3
Dinv24042 Davidia involucrata HOM05D005910 ORTHO05D007088 8.8e-57 224.2 193 66.8
Lj1P1133T16 Lonicera japonica HOM05D005910 ORTHO05D007088 5.7e-56 221.5 136 82.4
CSS0031188 Camellia sinensis var. sinensis HOM05D005910 ORTHO05D007088 1.8e-54 216.5 196 62.8
Ciclev10013918m.g Citrus clementina HOM05D005910 ORTHO05D007088 1.0e-52 210.7 137 81.8
Sabra16G0063200 Salix brachista HOM05D005910 ORTHO05D007088 2.5e-51 206.1 137 81.0
CSS0042896 Camellia sinensis var. sinensis HOM05D005910 ORTHO05D007088 1.2e-50 203.8 194 61.3
SEGI_08450 Sequoiadendron giganteum HOM05D005910 ORTHO05D007088 2.3e-49 199.5 167 67.7
CSS0024230 Camellia sinensis var. sinensis HOM05D005910 ORTHO05D007088 8.3e-47 191.0 199 55.8
Actinidia38594 Actinidia chinensis HOM05D005910 ORTHO05D007088 1.0e-41 174.1 126 74.6
MD14G1053500 Malus domestica HOM05D005910 ORTHO05D007088 7.5e-40 167.9 115 76.5
DCAR_009688 Daucus carota HOM05D005910 ORTHO05D007088 9.8e-40 167.5 101 80.2
MD11G1118600 Malus domestica HOM05D005910 ORTHO05D007088 3.7e-39 165.6 122 73.0
Haze_26182 Corylus avellana HOM05D005910 ORTHO05D007088 4.7e-34 148.7 166 44.6
MD03G1239200 Malus domestica HOM05D005910 ORTHO05D007088 6.0e-29 131.7 135 58.5
MD00G1019800 Malus domestica HOM05D005910 ORTHO05D007088 1.1e-27 127.5 93 69.9
QL03p020127 Quercus lobata HOM05D005910 ORTHO05D007088 4.7e-26 122.1 107 62.6
QL07p006238 Quercus lobata HOM05D005910 ORTHO05D007088 2.0e-24 116.7 106 60.4
CDE06G1328 Ceratophyllum demersum HOM05D005910 ORTHO05D007088 3.8e-23 112.5 84 73.8
Glyma.07G000600 Glycine max HOM05D005910 ORTHO05D007088 9.6e-19 97.8 80 71.2
PRCOL_00005630 Prasinoderma coloniale HOM05D005910 ORTHO05D007088 2.8e-18 96.3 172 34.3
AUR62043130 Chenopodium quinoa HOM05D005910 ORTHO05D007088 4.7e-18 95.5 79 70.9
Sabra08G0162900 Salix brachista HOM05D003359 ORTHO05D007088 1.7e-15 87.0 45 88.9
Cre03.g182900 Chlamydomonas reinhardtii HOM05D005910 ORTHO05D007088 3.2e-14 82.8 162 33.3
HanXRQChr13g0398341 Helianthus annuus HOM05D005910 ORTHO05D007088 6.6e-12 75.1 64 62.5
SGA_v2.0_scaffold131G34402 Striga asiatica HOM05D005910 ORTHO05D007088 1.5e-08 63.9 52 75.0
SGA_v2.0_scaffold472G52090 Striga asiatica HOM05D005910 ORTHO05D007088 2.0e-08 63.5 52 75.0
SGA_v2.0_scaffold105G30513 Striga asiatica HOM05D000825 ORTHO05D002486 8.4e-07 58.2 82 57.3


User provided reference genes

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