Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu057538.1 Olea europaea HOM05D007247 ORTHO05D009208 1.9e-47 192.2 99 100.0
MSTRG.13349 Avicennia marina HOM05D007247 ORTHO05D009208 2.2e-19 99.0 98 59.2
Dinv15222 Davidia involucrata HOM05D007247 ORTHO05D009208 3.2e-18 95.1 95 62.1
Oeu001697.1 Olea europaea HOM05D007247 ORTHO05D009208 3.2e-18 95.1 93 58.1
Dinv14726 Davidia involucrata HOM05D007247 ORTHO05D009208 5.4e-18 94.4 100 58.0
Actinidia15099 Actinidia chinensis HOM05D000233 ORTHO05D000020 1.6e-17 92.8 86 59.3
Hma1.2p1_0079F.1_g041000 Hydrangea macrophylla HOM05D007247 ORTHO05D009208 2.7e-17 92.0 93 53.8
Lj6E813T0 Lonicera japonica HOM05D007247 ORTHO05D009208 3.5e-17 91.7 96 57.3
QL03p057801 Quercus lobata HOM05D007247 ORTHO05D009208 8.6e-16 87.0 88 58.0
Solyc05g013560.3 Solanum lycopersicum HOM05D007247 ORTHO05D009208 1.5e-15 86.3 93 60.2
Duzib251G0560 Durio zibethinus HOM05D007247 ORTHO05D009208 4.3e-15 84.7 95 54.7
CiPaw.05G181400 Carya illinoinensis HOM05D007247 ORTHO05D009208 5.6e-15 84.3 88 60.2
Haze_12254 Corylus avellana HOM05D007247 ORTHO05D009208 1.2e-14 83.2 81 55.6
Sopen05g008460 Solanum pennellii HOM05D007247 ORTHO05D009208 1.2e-14 83.2 93 58.1
Thecc.02G261000 Theobroma cacao HOM05D007247 ORTHO05D009208 1.2e-14 83.2 95 54.7
Rhsim12G0040300 Rhododendron simsii HOM05D007247 ORTHO05D009208 1.6e-14 82.8 78 62.8
Actinidia01350 Actinidia chinensis HOM05D000233 ORTHO05D000020 2.1e-14 82.4 80 61.2
Potri.008G186200 Populus trichocarpa HOM05D007247 ORTHO05D009208 2.8e-14 82.0 94 52.1
Cfa009217 Carpinus fangiana HOM05D007247 ORTHO05D009208 4.7e-14 81.3 88 51.1
Duzib248G0486 Durio zibethinus HOM05D007247 ORTHO05D009208 6.2e-14 80.9 95 53.7
CiPaw.06G067400 Carya illinoinensis HOM05D007247 ORTHO05D009208 1.1e-13 80.1 92 51.1
Cfa009218 Carpinus fangiana HOM05D007247 ORTHO05D009208 1.8e-13 79.3 94 52.1
Lj4g0020020 Lotus japonicus HOM05D007247 ORTHO05D009208 1.8e-13 79.3 79 58.2
Actinidia08135 Actinidia chinensis HOM05D007247 ORTHO05D009208 3.1e-13 78.6 77 59.7
Lsat_1_v5_gn_4_4161 Lactuca sativa HOM05D007247 ORTHO05D009208 5.2e-13 77.8 65 64.6
Medtr5g032790 Medicago truncatula HOM05D007247 ORTHO05D009208 5.2e-13 77.8 69 62.3
Psat2g084240 Pisum sativum HOM05D007247 ORTHO05D009208 5.2e-13 77.8 78 59.0
HanXRQChr12g0385811 Helianthus annuus HOM05D007247 ORTHO05D009208 6.8e-13 77.4 84 52.4
Peaxi162Scf00128g00216 Petunia axillaris HOM05D007247 ORTHO05D009208 6.8e-13 77.4 70 61.4
TPR.G38802 Trifolium pratense HOM05D007247 ORTHO05D009208 6.8e-13 77.4 69 60.9
Ciclev10033189m.g Citrus clementina HOM05D007247 ORTHO05D009208 1.2e-12 76.6 85 60.0
Potri.010G046700 Populus trichocarpa HOM05D007247 ORTHO05D009208 1.2e-12 76.6 92 52.2
Psat4g115600 Pisum sativum HOM05D007247 ORTHO05D009208 1.5e-12 76.3 78 56.4
SalBow8G0600 Salvia bowleyana HOM05D007247 ORTHO05D009208 1.5e-12 76.3 90 47.8
Sabra10G0021600 Salix brachista HOM05D007247 ORTHO05D009208 2.0e-12 75.9 92 52.2
CANSAT01G0364 Cannabis sativa HOM05D007247 ORTHO05D009208 3.4e-12 75.1 94 53.2
THA.LOC104825564 Tarenaya hassleriana HOM05D007247 ORTHO05D009208 4.4e-12 74.7 91 51.6
Atru.chr11.2143 Acer truncatum HOM05D007247 ORTHO05D009208 5.8e-12 74.3 80 57.5
Manes.12G022500 Manihot esculenta HOM05D007247 ORTHO05D009208 5.8e-12 74.3 93 50.5
GSVIVG01005747001 Vitis vinifera HOM05D000233 ORTHO05D000020 5.8e-12 74.3 87 50.6
Lalb_Chr09g0326081 Lupinus albus HOM05D007247 ORTHO05D009208 7.5e-12 73.9 79 55.7
Gohir.A03G134800 Gossypium hirsutum HOM05D007247 ORTHO05D009208 9.9e-12 73.6 101 49.5
Gohir.D02G158400 Gossypium hirsutum HOM05D007247 ORTHO05D009208 9.9e-12 73.6 101 49.5
Gorai.005G177800 Gossypium raimondii HOM05D007247 ORTHO05D009208 9.9e-12 73.6 101 49.5
Aqoxy5G03750 Aquilegia oxysepala HOM05D007247 ORTHO05D009208 1.3e-11 73.2 90 51.1
Aa31sc790G10 Aethionema arabicum HOM05D007247 ORTHO05D009208 1.7e-11 72.8 77 51.9
Carub.0002s1440 Capsella rubella HOM05D007247 ORTHO05D009208 1.7e-11 72.8 71 54.9
Eucgr.H02494 Eucalyptus grandis HOM05D007247 ORTHO05D009208 1.7e-11 72.8 77 54.5
Medtr8g069350 Medicago truncatula HOM05D007247 ORTHO05D009208 2.2e-11 72.4 86 52.3
Ca_22588_v3 Cicer arietinum L. HOM05D007247 ORTHO05D009208 2.9e-11 72.0 81 51.9
Glyma.18G144900 Glycine max HOM05D007247 ORTHO05D009208 2.9e-11 72.0 90 50.0
COL.COLO4_04829 Corchorus olitorius HOM05D007247 ORTHO05D009208 4.9e-11 71.2 100 50.0
A08p26670 Brassica napus HOM05D007247 ORTHO05D009208 6.4e-11 70.9 76 52.6
Prupe.1G245600 Prunus persica HOM05D007247 ORTHO05D009208 6.4e-11 70.9 66 63.6
BraA08t34615Z Brassica rapa HOM05D007247 ORTHO05D009208 8.3e-11 70.5 76 52.6
C03p73320 Brassica napus HOM05D007247 ORTHO05D009208 1.4e-10 69.7 76 52.6
Glyma.08G281800 Glycine max HOM05D007247 ORTHO05D009208 1.9e-10 69.3 91 47.3
VMungo0251G0750 Vigna mungo HOM05D007247 ORTHO05D009208 1.9e-10 69.3 98 48.0
BcaB03g15384 Brassica carinata HOM05D007247 ORTHO05D009208 3.2e-10 68.6 71 50.7
BcaC08g46018 Brassica carinata HOM05D007247 ORTHO05D009208 3.2e-10 68.6 75 49.3
A07p32290 Brassica napus HOM05D007247 ORTHO05D009208 3.2e-10 68.6 75 49.3
C06p38130 Brassica napus HOM05D007247 ORTHO05D009208 3.2e-10 68.6 75 49.3
BolC6t38910H Brassica oleracea HOM05D007247 ORTHO05D009208 3.2e-10 68.6 75 49.3
BraA07t30854Z Brassica rapa HOM05D007247 ORTHO05D009208 3.2e-10 68.6 75 49.3
HanXRQChr17g0569581 Helianthus annuus HOM05D007247 ORTHO05D009208 4.1e-10 68.2 67 56.7
Nn4g22599 Nelumbo nucifera HOM05D007247 ORTHO05D009208 5.4e-10 67.8 75 57.3
BcaB03g12051 Brassica carinata HOM05D007247 ORTHO05D009208 9.2e-10 67.0 71 54.9
Phvul.003G064700 Phaseolus vulgaris HOM05D007247 ORTHO05D009208 9.2e-10 67.0 79 50.6
Sc04g0009510 Simmondsia chinensis HOM05D007247 ORTHO05D009208 9.2e-10 67.0 95 43.2
BcaC01g01656 Brassica carinata HOM05D007247 ORTHO05D009208 1.2e-09 66.6 76 51.3
BolC3t19629H Brassica oleracea HOM05D007247 ORTHO05D009208 1.2e-09 66.6 76 51.3
Migut.E00205 Erythranthe guttata HOM05D000233 ORTHO05D000020 1.2e-09 66.6 45 73.3
AL1G40330 Arabidopsis lyrata HOM05D007247 ORTHO05D009208 1.6e-09 66.2 67 52.2
MD13G1100900 Malus domestica HOM05D007247 ORTHO05D009208 2.1e-09 65.9 70 57.1
MD16G1101300 Malus domestica HOM05D007247 ORTHO05D009208 2.1e-09 65.9 80 56.2
TPR.G17749 Trifolium pratense HOM05D007247 ORTHO05D009208 2.1e-09 65.9 75 53.3
CARHR026490 Cardamine hirsuta HOM05D007247 ORTHO05D009208 6.0e-09 64.3 59 57.6
DCAR_026511 Daucus carota HOM05D007247 ORTHO05D009208 1.0e-08 63.5 91 47.3
FvH4_4g25640 Fragaria vesca HOM05D007247 ORTHO05D009208 1.0e-08 63.5 98 44.9
Manes.13G023600 Manihot esculenta HOM05D007247 ORTHO05D009208 1.0e-08 63.5 83 50.6
ECA234G3809 Erigeron canadensis HOM05D007247 ORTHO05D009208 1.3e-08 63.2 88 45.5
CSS0032991 Camellia sinensis var. sinensis HOM05D007247 ORTHO05D009208 1.7e-08 62.8 53 67.9
CSS0043579 Camellia sinensis var. sinensis HOM05D007247 ORTHO05D009208 1.7e-08 62.8 53 67.9
Thhalv10009220m.g Eutrema salsugineum HOM05D007247 ORTHO05D009208 1.7e-08 62.8 75 48.0
FAN17G2797 Fragaria x ananassa HOM05D007247 ORTHO05D009208 1.7e-08 62.8 98 44.9
Sp1g23190 Schrenkiella parvula HOM05D007247 ORTHO05D009208 1.7e-08 62.8 60 56.7
unitig_8.g3935 Utricularia gibba HOM05D007247 ORTHO05D009208 3.0e-08 62.0 81 50.6
AT1G67910 Arabidopsis thaliana HOM05D007247 ORTHO05D009208 3.9e-08 61.6 80 50.0
FAN12G2765 Fragaria x ananassa HOM05D007247 ORTHO05D009208 3.9e-08 61.6 98 43.9
AL2G26710 Arabidopsis lyrata HOM05D007247 ORTHO05D009208 5.1e-08 61.2 71 46.5
EL10Ac6g13820 Beta vulgaris HOM05D007247 ORTHO05D009208 5.1e-08 61.2 79 51.9
Carub.0001s2551 Capsella rubella HOM05D007247 ORTHO05D009208 5.1e-08 61.2 60 53.3
TAR636G3342 Trochodendron aralioides HOM05D007247 ORTHO05D009208 6.6e-08 60.8 70 54.3
FAN07G0181 Fragaria x ananassa HOM05D007247 ORTHO05D009208 8.6e-08 60.5 98 42.9
Aqoxy3G01230 Aquilegia oxysepala HOM05D007247 ORTHO05D009208 1.5e-07 59.7 52 59.6
TAR622G0973 Trochodendron aralioides HOM05D007247 ORTHO05D009208 1.9e-07 59.3 79 44.3
FAN22G0007 Fragaria x ananassa HOM05D007247 ORTHO05D009208 2.5e-07 58.9 94 42.6
FAN22G1782 Fragaria x ananassa HOM05D007247 ORTHO05D009208 2.5e-07 58.9 94 42.6
unitig_22.g5530 Utricularia gibba HOM05D007247 ORTHO05D009208 2.5e-07 58.9 59 55.9
ATR0824G192 Amborella trichopoda HOM05D007247 ORTHO05D009208 5.6e-07 57.8 77 46.8
AUR62005467 Chenopodium quinoa HOM05D007247 ORTHO05D009208 5.6e-07 57.8 63 54.0
TAR624G0983 Trochodendron aralioides HOM05D006736 ORTHO05D008459 5.6e-07 57.8 41 63.4
TAR636G3092 Trochodendron aralioides HOM05D007247 ORTHO05D009208 7.3e-07 57.4 70 52.9
Lj6g0005510 Lotus japonicus HOM05D006736 ORTHO05D008459 2.8e-06 55.5 51 52.9
Sabra16G0244100 Salix brachista HOM05D006736 ORTHO05D008459 2.8e-06 55.5 49 55.1
AT1G24577 Arabidopsis thaliana HOM05D007247 ORTHO05D009208 3.6e-06 55.1 64 45.3
AUR62024275 Chenopodium quinoa HOM05D007247 ORTHO05D009208 3.6e-06 55.1 84 45.2
TAR629G1528 Trochodendron aralioides HOM05D007247 ORTHO05D009208 3.6e-06 55.1 66 51.5
Rhsim06G0178800 Rhododendron simsii HOM05D006736 ORTHO05D008459 6.2e-06 54.3 59 45.8
RcHm_v2.0_Chr4g0433081 Rosa chinensis HOM05D007247 ORTHO05D009208 8.1e-06 53.9 96 44.8


User provided reference genes

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