Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu057248.1 Olea europaea HOM05D003984 ORTHO05D004740 4.4e-144 514.6 258 100.0
SGA_v2.0_scaffold62G21447 Striga asiatica HOM05D003984 ORTHO05D004740 7.2e-123 444.1 254 85.4
MSTRG.27450 Avicennia marina HOM05D003984 ORTHO05D004740 1.8e-121 439.5 254 84.3
Nitab4.5_0000830g0100 Nicotiana tabacum HOM05D003984 ORTHO05D004740 2.4e-118 429.1 254 83.1
Oeu055063.1 Olea europaea HOM05D003984 ORTHO05D004740 2.4e-118 429.1 255 82.0
Dinv31376 Davidia involucrata HOM05D003984 ORTHO05D004740 4.1e-118 428.3 254 83.1
Cc09_g02350 Coffea canephora HOM05D003984 ORTHO05D004740 1.6e-117 426.4 254 82.3
Dinv11820 Davidia involucrata HOM05D003984 ORTHO05D004740 3.5e-117 425.2 254 81.9
Nitab4.5_0001248g0030 Nicotiana tabacum HOM05D003984 ORTHO05D004740 3.5e-117 425.2 254 82.7
QL08p057270 Quercus lobata HOM05D003984 ORTHO05D004740 3.5e-117 425.2 254 81.1
Solyc04g049710.3 Solanum lycopersicum HOM05D003984 ORTHO05D004740 4.5e-117 424.9 254 82.7
Migut.F02015 Erythranthe guttata HOM05D003984 ORTHO05D004740 5.9e-117 424.5 254 80.7
Sopen04g019960 Solanum pennellii HOM05D003984 ORTHO05D004740 5.9e-117 424.5 254 82.7
CiPaw.01G278000 Carya illinoinensis HOM05D003984 ORTHO05D004740 1.7e-116 422.9 254 80.7
Atru.chr12.610 Acer truncatum HOM05D003984 ORTHO05D004740 1.1e-115 420.2 254 81.5
RcHm_v2.0_Chr1g0364411 Rosa chinensis HOM05D003984 ORTHO05D004740 1.1e-115 420.2 254 81.1
SGA_v2.0_scaffold329G48849 Striga asiatica HOM05D003984 ORTHO05D004740 1.1e-115 420.2 262 80.5
COL.COLO4_23777 Corchorus olitorius HOM05D003984 ORTHO05D004740 2.5e-115 419.1 254 81.5
Peaxi162Scf01024g00120 Petunia axillaris HOM05D003984 ORTHO05D004740 2.5e-115 419.1 254 81.9
Manes.10G040500 Manihot esculenta HOM05D003984 ORTHO05D004740 3.3e-115 418.7 254 81.5
CANSAT56G1305 Cannabis sativa HOM05D003984 ORTHO05D004740 5.5e-115 417.9 254 79.1
Nitab4.5_0004104g0120 Nicotiana tabacum HOM05D003984 ORTHO05D004740 7.2e-115 417.5 250 83.2
Rhsim09G0154900 Rhododendron simsii HOM05D003984 ORTHO05D004740 9.5e-115 417.2 251 82.1
CSS0025505 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 1.6e-114 416.4 254 79.9
MD01G1114200 Malus domestica HOM05D003984 ORTHO05D004740 1.6e-114 416.4 254 79.9
Prupe.2G220800 Prunus persica HOM05D003984 ORTHO05D004740 2.1e-114 416.0 254 79.5
MD07G1182100 Malus domestica HOM05D003984 ORTHO05D004740 2.8e-114 415.6 254 79.9
Peaxi162Scf00195g00824 Petunia axillaris HOM05D003984 ORTHO05D004740 3.6e-114 415.2 254 81.9
Nitab4.5_0000691g0240 Nicotiana tabacum HOM05D003984 ORTHO05D004740 4.7e-114 414.8 254 82.3
Actinidia13840 Actinidia chinensis HOM05D003984 ORTHO05D004740 8.0e-114 414.1 254 80.7
Cfa001574 Carpinus fangiana HOM05D003984 ORTHO05D004740 8.0e-114 414.1 254 79.5
CSS0036351 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 1.4e-113 413.3 254 79.5
Manes.07G104700 Manihot esculenta HOM05D003984 ORTHO05D004740 1.8e-113 412.9 254 80.7
CSS0011111 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 2.3e-113 412.5 254 81.1
Lj8A94T49 Lonicera japonica HOM05D003984 ORTHO05D004740 2.3e-113 412.5 255 80.8
Thecc.10G065000 Theobroma cacao HOM05D003984 ORTHO05D004740 3.0e-113 412.1 254 79.9
CiPaw.02G177500 Carya illinoinensis HOM05D003984 ORTHO05D004740 4.0e-113 411.8 255 80.0
Ciclev10032445m.g Citrus clementina HOM05D003984 ORTHO05D004740 5.2e-113 411.4 255 80.8
Medtr1g116240 Medicago truncatula HOM05D003984 ORTHO05D004740 6.8e-113 411.0 254 81.1
CSS0002243 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 8.9e-113 410.6 250 82.0
ClCG09G020350 Citrullus lanatus HOM05D003984 ORTHO05D004740 1.5e-112 409.8 254 79.9
Potri.008G046000 Populus trichocarpa HOM05D003984 ORTHO05D004740 2.0e-112 409.5 254 80.7
CsaV3_5G026080 Cucumis sativus L. HOM05D003984 ORTHO05D004740 4.4e-112 408.3 254 79.5
Lj5g0020432 Lotus japonicus HOM05D003984 ORTHO05D004740 4.4e-112 408.3 254 79.5
CAN.G186.31 Capsicum annuum HOM05D003984 ORTHO05D004740 5.7e-112 407.9 254 80.7
GSVIVG01032647001 Vitis vinifera HOM05D003984 ORTHO05D004740 9.8e-112 407.1 254 79.1
TWI15G0393 Tripterygium wilfordii HOM05D003984 ORTHO05D004740 6.3e-111 404.4 254 79.5
Potri.010G215500 Populus trichocarpa HOM05D003984 ORTHO05D004740 8.3e-111 404.1 257 80.2
Sed0003028 Sechium edule HOM05D003984 ORTHO05D004740 8.3e-111 404.1 254 78.3
Duzib114G0791 Durio zibethinus HOM05D003984 ORTHO05D004740 1.4e-110 403.3 254 79.9
Sabra08G0032300 Salix brachista HOM05D003984 ORTHO05D004740 1.4e-110 403.3 262 78.6
Psat6g240040 Pisum sativum HOM05D003984 ORTHO05D004740 2.4e-110 402.5 254 78.7
PGR044G2197 Punica granatum HOM05D003984 ORTHO05D004740 2.4e-110 402.5 254 79.1
PGSC0003DMG400032551 Solanum tuberosum HOM05D003984 ORTHO05D004740 2.4e-110 402.5 254 79.5
TPR.G10390 Trifolium pratense HOM05D003984 ORTHO05D004740 2.4e-110 402.5 251 79.7
Lalb_Chr02g0144171 Lupinus albus HOM05D003984 ORTHO05D004740 4.1e-110 401.7 254 78.7
TAR633G2252 Trochodendron aralioides HOM05D003984 ORTHO05D004740 4.1e-110 401.7 254 77.2
FAN10G1795 Fragaria x ananassa HOM05D003984 ORTHO05D004740 9.2e-110 400.6 254 78.0
Migut.F01787 Erythranthe guttata HOM05D003984 ORTHO05D004740 1.2e-109 400.2 255 78.0
FAN03G0045 Fragaria x ananassa HOM05D003984 ORTHO05D004740 2.0e-109 399.4 254 77.2
FAN06G2832 Fragaria x ananassa HOM05D003984 ORTHO05D004740 2.0e-109 399.4 254 77.6
EL10Ac2g03538 Beta vulgaris HOM05D003984 ORTHO05D004740 2.7e-109 399.1 255 78.8
Lalb_Chr21g0307521 Lupinus albus HOM05D003984 ORTHO05D004740 2.7e-109 399.1 261 77.4
Solyc04g009550.3 Solanum lycopersicum HOM05D003984 ORTHO05D004740 3.5e-109 398.7 254 78.3
AUR62036011 Chenopodium quinoa HOM05D003984 ORTHO05D004740 7.8e-109 397.5 254 78.0
FvH4_7g20520 Fragaria vesca HOM05D003984 ORTHO05D004740 1.0e-108 397.1 254 76.8
Lalb_Chr06g0164371 Lupinus albus HOM05D003984 ORTHO05D004740 1.0e-108 397.1 254 78.3
TAR623G0696 Trochodendron aralioides HOM05D003984 ORTHO05D004740 1.0e-108 397.1 256 75.0
Duzib128G0096 Durio zibethinus HOM05D003984 ORTHO05D004740 1.3e-108 396.7 250 80.4
Gohir.D10G216200 Gossypium hirsutum HOM05D003984 ORTHO05D004740 1.3e-108 396.7 254 78.3
AUR62041612 Chenopodium quinoa HOM05D003984 ORTHO05D004740 1.7e-108 396.4 253 77.9
DCAR_015251 Daucus carota HOM05D003984 ORTHO05D004740 2.3e-108 396.0 253 77.1
Glyma.10G294300 Glycine max HOM05D003984 ORTHO05D004740 2.3e-108 396.0 254 77.6
Gorai.011G241800 Gossypium raimondii HOM05D003984 ORTHO05D004740 2.3e-108 396.0 254 78.3
Gohir.A10G208060 Gossypium hirsutum HOM05D003984 ORTHO05D004740 8.6e-108 394.0 254 78.0
TWI63G0288 Tripterygium wilfordii HOM05D003984 ORTHO05D004740 1.1e-107 393.7 254 77.6
Glyma.20G244200 Glycine max HOM05D003984 ORTHO05D004740 1.5e-107 393.3 254 76.8
VMungo0720G0811 Vigna mungo HOM05D003984 ORTHO05D004740 3.3e-107 392.1 255 77.6
DCAR_019150 Daucus carota HOM05D003984 ORTHO05D004740 1.6e-106 389.8 254 76.4
Eucgr.J01137 Eucalyptus grandis HOM05D003984 ORTHO05D004740 2.8e-106 389.0 254 77.2
Gorai.012G092700 Gossypium raimondii HOM05D003984 ORTHO05D004740 2.8e-106 389.0 254 75.6
Hund22456 Selenicereus undatus HOM05D003984 ORTHO05D004740 3.6e-106 388.7 255 79.2
Gohir.A05G343700 Gossypium hirsutum HOM05D003984 ORTHO05D004740 2.3e-105 386.0 254 75.6
Nn2g10608 Nelumbo nucifera HOM05D003984 ORTHO05D004740 5.2e-105 384.8 256 73.4
SalBow3G2899 Salvia bowleyana HOM05D003984 ORTHO05D004740 5.2e-105 384.8 258 75.2
arahy.Tifrunner.gnm1.ann1.V3HSKN Arachis hypogaea HOM05D003984 ORTHO05D004740 6.8e-105 384.4 254 76.4
Phvul.007G005800 Phaseolus vulgaris HOM05D003984 ORTHO05D004740 8.9e-105 384.0 255 76.1
Sabra10G0166500 Salix brachista HOM05D003984 ORTHO05D004740 8.9e-105 384.0 287 70.7
Ah.10g033080 Amaranthus hybridus HOM05D003984 ORTHO05D004740 1.2e-104 383.6 278 71.9
THA.LOC104825886 Tarenaya hassleriana HOM05D003984 ORTHO05D004740 2.6e-104 382.5 254 75.6
Lj1A928T58 Lonicera japonica HOM05D003984 ORTHO05D004740 5.8e-104 381.3 295 67.1
Nn2g12956 Nelumbo nucifera HOM05D003984 ORTHO05D004740 1.3e-103 380.2 255 74.5
PSO384G2137 Papaver somniferum HOM05D003984 ORTHO05D004740 3.7e-103 378.6 254 74.4
PSO339G0239 Papaver somniferum HOM05D003984 ORTHO05D004740 2.4e-102 375.9 255 73.3
Sed0000226 Sechium edule HOM05D003984 ORTHO05D004740 7.0e-102 374.4 254 74.0
ECA238G2056 Erigeron canadensis HOM05D003984 ORTHO05D004740 2.7e-101 372.5 251 73.3
HanXRQChr12g0367731 Helianthus annuus HOM05D003984 ORTHO05D004740 6.0e-101 371.3 254 72.8
THA.LOC104810167 Tarenaya hassleriana HOM05D003984 ORTHO05D004740 6.6e-100 367.9 250 73.6
THA.LOC104824242 Tarenaya hassleriana HOM05D003984 ORTHO05D004740 4.3e-99 365.2 250 74.0
Haze_16954 Corylus avellana HOM05D003984 ORTHO05D004740 2.1e-98 362.8 225 77.3
ATR0594G132 Amborella trichopoda HOM05D003984 ORTHO05D004740 6.2e-98 361.3 255 70.6
arahy.Tifrunner.gnm1.ann1.B234YK Arachis hypogaea HOM05D003984 ORTHO05D004740 6.8e-97 357.8 307 62.9
Aqoxy4G03159 Aquilegia oxysepala HOM05D003984 ORTHO05D004740 1.2e-96 357.1 269 68.4
PSO339G2647 Papaver somniferum HOM05D003984 ORTHO05D004740 4.4e-96 355.1 256 70.3
HanXRQChr07g0200921 Helianthus annuus HOM05D003984 ORTHO05D004740 2.2e-95 352.8 254 70.5
Aa31sc33G70 Aethionema arabicum HOM05D003984 ORTHO05D004740 6.4e-95 351.3 257 70.8
CDE09G0608 Ceratophyllum demersum HOM05D003984 ORTHO05D004740 1.4e-94 350.1 255 69.0
unitig_0.g190 Utricularia gibba HOM05D003984 ORTHO05D004740 1.9e-94 349.7 235 74.5
AL5G36110 Arabidopsis lyrata HOM05D003984 ORTHO05D004740 2.4e-94 349.4 254 70.9
Lsat_1_v5_gn_2_115481 Lactuca sativa HOM05D003984 ORTHO05D004740 3.2e-94 349.0 244 73.0
AT3G55000 Arabidopsis thaliana HOM05D003984 ORTHO05D004740 1.2e-93 347.1 254 70.9
AL5G36120 Arabidopsis lyrata HOM05D003984 ORTHO05D004740 2.7e-93 345.9 254 70.1
Os11g0102600 Oryza sativa ssp. japonica HOM05D003984 ORTHO05D004740 6.0e-93 344.7 256 67.2
Os12g0102200 Oryza sativa ssp. japonica HOM05D003984 ORTHO05D004740 6.0e-93 344.7 256 67.2
HPP92_019786 Vanilla planifolia HOM05D003984 ORTHO05D004740 1.0e-92 344.0 255 68.6
Gohir.D04G082100 Gossypium hirsutum HOM05D003984 ORTHO05D004740 2.3e-92 342.8 227 75.3
AT3G55005 Arabidopsis thaliana HOM05D003984 ORTHO05D004740 3.0e-92 342.4 254 70.1
HPP92_017944 Vanilla planifolia HOM05D003984 ORTHO05D004740 3.0e-92 342.4 256 69.1
Carub.0005s2162 Capsella rubella HOM05D003984 ORTHO05D004740 3.9e-92 342.0 254 69.3
Ca_11380_v3 Cicer arietinum L. HOM05D003984 ORTHO05D004740 1.9e-91 339.7 262 68.7
Thhalv10010647m.g Eutrema salsugineum HOM05D003984 ORTHO05D004740 4.3e-91 338.6 254 68.9
BolC6t37445H Brassica oleracea HOM05D003984 ORTHO05D004740 7.3e-91 337.8 254 68.5
CARHR165000 Cardamine hirsuta HOM05D003984 ORTHO05D004740 7.3e-91 337.8 254 69.3
Lj1C926T5 Lonicera japonica HOM05D003984 ORTHO05D004740 7.3e-91 337.8 234 71.8
MSTRG.9196 Avicennia marina HOM05D003984 ORTHO05D004740 9.5e-91 337.4 197 85.8
HanXRQChr14g0460861 Helianthus annuus HOM05D003984 ORTHO05D004740 1.2e-90 337.0 254 69.7
BcaB02g07705 Brassica carinata HOM05D003984 ORTHO05D004740 1.6e-90 336.7 254 68.5
BcaC08g44716 Brassica carinata HOM05D003984 ORTHO05D004740 1.6e-90 336.7 254 67.7
A07p22390 Brassica napus HOM05D003984 ORTHO05D004740 1.6e-90 336.7 254 68.5
C06p22550 Brassica napus HOM05D003984 ORTHO05D004740 1.6e-90 336.7 254 67.7
CDE02G0952 Ceratophyllum demersum HOM05D003984 ORTHO05D004740 2.8e-90 335.9 252 67.1
Sp5g07420 Schrenkiella parvula HOM05D003984 ORTHO05D004740 2.3e-89 332.8 255 68.2
Sp5g07430 Schrenkiella parvula HOM05D003984 ORTHO05D004740 3.1e-89 332.4 254 68.9
Lsat_1_v5_gn_8_21240 Lactuca sativa HOM05D003984 ORTHO05D004740 8.9e-89 330.9 256 66.4
Zm00001eb094350 Zea mays HOM05D003984 ORTHO05D004740 2.6e-88 329.3 256 65.2
Carub.0005s2163 Capsella rubella HOM05D003984 ORTHO05D004740 3.4e-88 328.9 254 67.7
BraA07t29915Z Brassica rapa HOM05D003984 ORTHO05D004740 3.7e-87 325.5 273 63.7
Sc20g0002240 Simmondsia chinensis HOM05D003984 ORTHO05D004740 1.1e-86 323.9 254 65.7
Zm00001eb163130 Zea mays HOM05D003984 ORTHO05D004740 1.1e-86 323.9 256 65.2
MELO3C025490.2 Cucumis melo HOM05D003984 ORTHO05D004740 2.3e-84 316.2 211 76.8
CARHR165010 Cardamine hirsuta HOM05D003984 ORTHO05D004740 3.0e-84 315.8 255 65.5
Sopen04g004710 Solanum pennellii HOM05D003984 ORTHO05D004740 1.5e-83 313.5 198 79.8
BraA09t40255Z Brassica rapa HOM05D003984 ORTHO05D004740 2.8e-82 309.3 254 63.0
C08p30240 Brassica napus HOM05D003984 ORTHO05D004740 8.9e-81 304.3 255 62.7
A09p48020 Brassica napus HOM05D003984 ORTHO05D004740 7.6e-80 301.2 254 61.8
BcaB01g00136 Brassica carinata HOM05D003984 ORTHO05D004740 3.5e-77 292.4 250 60.8
BcaNung04652 Brassica carinata HOM05D003984 ORTHO05D004740 4.6e-77 292.0 255 60.4
Thhalv10010676m.g Eutrema salsugineum HOM05D003984 ORTHO05D004740 1.7e-76 290.0 241 65.1
BolC8t50631H Brassica oleracea HOM05D003984 ORTHO05D004740 1.3e-74 283.9 254 58.3
Sc20g0002230 Simmondsia chinensis HOM05D003984 ORTHO05D004740 4.9e-71 271.9 191 71.2
FAN01G2342 Fragaria x ananassa HOM05D003984 ORTHO05D004740 4.8e-66 255.4 144 85.4
FAN06G1180 Fragaria x ananassa HOM05D003984 ORTHO05D004740 1.4e-57 227.3 161 68.3
AagrBONN_evm.TU.Sc2ySwM_344.1695 Anthoceros agrestis HOM05D003984 ORTHO05D004740 6.3e-42 175.3 213 49.8
Pp3c14_5580 Physcomitrium patens HOM05D003984 ORTHO05D004740 1.1e-38 164.5 151 54.3
Cpa.g.sc1.281 Carica papaya HOM05D003984 ORTHO05D004740 2.5e-38 163.3 108 75.0
Mapoly0066s0078 Marchantia polymorpha HOM05D003984 ORTHO05D004740 7.2e-38 161.8 146 57.5
SEGI_35779 Sequoiadendron giganteum HOM05D003984 ORTHO05D004740 5.7e-35 152.1 233 40.3
Actinidia29191 Actinidia chinensis HOM05D003984 ORTHO05D004740 3.1e-33 146.4 110 69.1
FAN06G2469 Fragaria x ananassa HOM05D003984 ORTHO05D004740 9.4e-30 134.8 74 91.9
TAR624G0784 Trochodendron aralioides HOM05D003984 ORTHO05D004740 7.9e-29 131.7 93 68.8
SEGI_13922 Sequoiadendron giganteum HOM05D003984 ORTHO05D004740 4.8e-26 122.5 89 70.8
CBR_g37750 Chara braunii HOM05D000019 ORTHO05D000002 5.3e-25 119.0 231 38.1
SMO356G0399 Selaginella moellendorffii HOM05D003984 ORTHO05D004740 2.0e-19 100.5 182 36.3
CBR_g10977 Chara braunii HOM05D003984 ORTHO05D004740 1.2e-16 91.3 129 41.1
AUR62035988 Chenopodium quinoa HOM05D003984 ORTHO05D004740 2.2e-15 87.0 54 70.4
SHI42769 Sapria himalayana HOM05D003984 ORTHO05D004740 2.2e-10 70.5 59 59.3
CSS0046661 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 1.8e-09 67.4 40 75.0
RcHm_v2.0_Chr2g0140211 Rosa chinensis HOM05D003984 ORTHO05D004740 5.4e-09 65.9 43 67.4
MCO05G642 Micromonas commoda HOM05D003984 ORTHO05D004740 1.6e-08 64.3 86 37.2
HanXRQChr17g0557371 Helianthus annuus HOM05D000549 ORTHO05D004740 2.7e-08 63.5 40 65.0
PRCOL_00000040 Prasinoderma coloniale HOM05D003984 ORTHO05D004740 3.5e-08 63.2 136 32.4
Nn6g33815 Nelumbo nucifera HOM05D003984 ORTHO05D004740 5.0e-07 59.3 40 62.5
Sabra18G0026300 Salix brachista HOM05D002732 ORTHO05D002955 1.1e-06 58.2 32 90.6


User provided reference genes

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