Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu057164.1 Olea europaea HOM05D006098 ORTHO05D007470 6.3e-266 920.2 471 100.0
Oeu042192.1 Olea europaea HOM05D006098 ORTHO05D007470 5.7e-235 817.4 471 90.0
Oeu042191.1 Olea europaea HOM05D006098 ORTHO05D007470 2.8e-234 815.1 471 89.8
Oeu046790.1 Olea europaea HOM05D006098 ORTHO05D007470 9.2e-201 703.7 476 77.9
SalBow4G1396 Salvia bowleyana HOM05D006098 ORTHO05D007470 1.3e-194 683.3 448 78.6
Cc08_g05440 Coffea canephora HOM05D006098 ORTHO05D007470 2.1e-189 666.0 455 77.1
Migut.A00537 Erythranthe guttata HOM05D006098 ORTHO05D007470 5.4e-185 651.4 471 73.2
Peaxi162Scf00045g00071 Petunia axillaris HOM05D006098 ORTHO05D007470 9.3e-185 650.6 438 76.0
Peaxi162Scf00053g00062 Petunia axillaris HOM05D006098 ORTHO05D007470 1.0e-183 647.1 469 73.3
MSTRG.1762 Avicennia marina HOM05D006098 ORTHO05D007470 3.0e-183 645.6 472 73.1
CAN.G1026.8 Capsicum annuum HOM05D006098 ORTHO05D007470 3.9e-183 645.2 469 72.7
Solyc08g075520.4 Solanum lycopersicum HOM05D006098 ORTHO05D007470 2.5e-182 642.5 469 72.9
Nitab4.5_0011712g0010 Nicotiana tabacum HOM05D006098 ORTHO05D007470 2.8e-181 639.0 456 73.9
Sopen08g001580 Solanum pennellii HOM05D006098 ORTHO05D007470 1.4e-180 636.7 455 74.7
PGSC0003DMG400018483 Solanum tuberosum HOM05D006098 ORTHO05D007470 3.1e-180 635.6 458 74.5
Nitab4.5_0000985g0060 Nicotiana tabacum HOM05D006098 ORTHO05D007470 1.5e-179 633.3 469 72.9
Dinv41811 Davidia involucrata HOM05D006098 ORTHO05D007470 2.0e-179 632.9 432 76.6
Nitab4.5_0000898g0120 Nicotiana tabacum HOM05D006098 ORTHO05D007470 9.3e-177 624.0 459 73.6
Nitab4.5_0001175g0140 Nicotiana tabacum HOM05D006098 ORTHO05D007470 9.3e-177 624.0 507 67.5
Solyc08g005560.3 Solanum lycopersicum HOM05D006098 ORTHO05D007470 1.0e-175 620.5 454 72.7
CAN.G884.9 Capsicum annuum HOM05D006098 ORTHO05D007470 3.9e-175 618.6 456 72.4
SGA_v2.0_scaffold111G31352 Striga asiatica HOM05D006098 ORTHO05D007470 1.3e-173 613.6 430 75.1
CSS0030969 Camellia sinensis var. sinensis HOM05D006098 ORTHO05D007470 2.8e-173 612.5 422 75.4
CAN.G884.14 Capsicum annuum HOM05D006098 ORTHO05D007470 4.0e-172 608.6 457 70.9
Nitab4.5_0000030g0370 Nicotiana tabacum HOM05D006098 ORTHO05D007470 1.7e-170 603.2 484 69.4
COL.COLO4_10360 Corchorus olitorius HOM05D006098 ORTHO05D007470 1.4e-169 600.1 396 78.5
Actinidia01257 Actinidia chinensis HOM05D006098 ORTHO05D007470 1.9e-169 599.7 413 75.8
Actinidia14735 Actinidia chinensis HOM05D006098 ORTHO05D007470 2.5e-169 599.4 420 74.5
Thecc.03G318000 Theobroma cacao HOM05D006098 ORTHO05D007470 3.2e-169 599.0 396 78.3
Duzib205G1615 Durio zibethinus HOM05D006098 ORTHO05D007470 2.1e-168 596.3 377 80.9
Rhsim11G0034900 Rhododendron simsii HOM05D006098 ORTHO05D007470 7.9e-168 594.3 420 73.6
vmacro00080 Vaccinium macrocarpon HOM05D006098 ORTHO05D007470 1.9e-166 589.7 479 66.6
GSVIVG01036872001 Vitis vinifera HOM05D006098 ORTHO05D007470 1.9e-166 589.7 395 77.0
Gorai.008G220000 Gossypium raimondii HOM05D006098 ORTHO05D007470 2.2e-165 586.3 393 76.8
DCAR_028369 Daucus carota HOM05D006098 ORTHO05D007470 6.3e-165 584.7 403 74.2
ECA246G0847 Erigeron canadensis HOM05D006098 ORTHO05D007470 4.1e-164 582.0 399 74.2
Nn1g09368 Nelumbo nucifera HOM05D006098 ORTHO05D007470 6.9e-164 581.3 418 72.5
Lsat_1_v5_gn_3_19721 Lactuca sativa HOM05D006098 ORTHO05D007470 3.4e-163 578.9 374 77.0
TAR629G3250 Trochodendron aralioides HOM05D006098 ORTHO05D007470 7.7e-163 577.8 384 77.1
HanXRQChr13g0411151 Helianthus annuus HOM05D006098 ORTHO05D007470 5.0e-162 575.1 400 74.2
Potri.003G033300 Populus trichocarpa HOM05D006098 ORTHO05D007470 5.0e-162 575.1 392 74.2
Atru.chr8.2640 Acer truncatum HOM05D006098 ORTHO05D007470 2.5e-161 572.8 383 75.5
Gorai.004G178500 Gossypium raimondii HOM05D006098 ORTHO05D007470 2.5e-161 572.8 393 75.3
SalBow8G2199 Salvia bowleyana HOM05D006098 ORTHO05D007470 3.2e-161 572.4 457 67.8
Actinidia18166 Actinidia chinensis HOM05D006098 ORTHO05D007470 7.2e-161 571.2 395 75.2
Sabra01G0135500 Salix brachista HOM05D006098 ORTHO05D007470 1.6e-160 570.1 396 73.5
Manes.15G184300 Manihot esculenta HOM05D006098 ORTHO05D007470 3.6e-160 568.9 383 75.5
Rhsim11G0035500 Rhododendron simsii HOM05D006098 ORTHO05D007470 4.6e-160 568.5 462 66.5
Cpa.g.sc71.63 Carica papaya HOM05D006098 ORTHO05D007470 1.0e-159 567.4 436 68.8
Potri.001G193400 Populus trichocarpa HOM05D006098 ORTHO05D007470 1.0e-159 567.4 392 73.2
ECA240G1264 Erigeron canadensis HOM05D006098 ORTHO05D007470 1.4e-159 567.0 401 72.8
Gohir.A08G150000 Gossypium hirsutum HOM05D006098 ORTHO05D007470 6.7e-159 564.7 393 74.3
PGR031G3371 Punica granatum HOM05D006098 ORTHO05D007470 4.3e-158 562.0 389 74.3
Dinv37422 Davidia involucrata HOM05D006098 ORTHO05D007470 1.7e-157 560.1 427 71.0
EL10Ac5g12579 Beta vulgaris HOM05D006098 ORTHO05D007470 2.8e-157 559.3 388 73.7
FvH4_2g37220 Fragaria vesca HOM05D006098 ORTHO05D007470 2.8e-157 559.3 422 69.2
Nn7g37397 Nelumbo nucifera HOM05D006098 ORTHO05D007470 3.7e-157 558.9 406 72.7
HanXRQChr17g0537231 Helianthus annuus HOM05D006098 ORTHO05D007470 4.8e-157 558.5 409 71.1
Lsat_1_v5_gn_5_57121 Lactuca sativa HOM05D006098 ORTHO05D007470 1.1e-156 557.4 440 68.9
FAN27G2650 Fragaria x ananassa HOM05D006098 ORTHO05D007470 3.1e-156 555.8 422 68.7
AUR62010477 Chenopodium quinoa HOM05D006098 ORTHO05D007470 1.2e-155 553.9 388 72.9
Lj8A337G13 Lonicera japonica HOM05D006098 ORTHO05D007470 2.0e-155 553.1 360 78.1
FAN20G1855 Fragaria x ananassa HOM05D006098 ORTHO05D007470 3.4e-155 552.4 422 68.7
HanXRQChr03g0081041 Helianthus annuus HOM05D006098 ORTHO05D007470 4.5e-155 552.0 439 67.2
Actinidia32783 Actinidia chinensis HOM05D006098 ORTHO05D007470 1.7e-154 550.1 444 68.0
RcHm_v2.0_Chr6g0304491 Rosa chinensis HOM05D006098 ORTHO05D007470 2.9e-154 549.3 422 68.2
MBI15_g33454_MAGBIO Magnolia biondii HOM05D006098 ORTHO05D007470 4.2e-153 545.4 402 72.6
Duzib068G0239 Durio zibethinus HOM05D006098 ORTHO05D007470 7.2e-153 544.7 394 72.3
FAN15G0890 Fragaria x ananassa HOM05D006098 ORTHO05D007470 1.5e-150 537.0 425 67.3
Ah.12g058500 Amaranthus hybridus HOM05D006098 ORTHO05D007470 2.0e-150 536.6 418 67.5
AUR62030416 Chenopodium quinoa HOM05D006098 ORTHO05D007470 2.6e-150 536.2 420 67.1
Gohir.D12G205100 Gossypium hirsutum HOM05D006098 ORTHO05D007470 2.6e-147 526.2 333 80.5
THA.LOC104811082 Tarenaya hassleriana HOM05D006098 ORTHO05D007470 1.0e-146 524.2 437 65.7
Gohir.A12G202400 Gossypium hirsutum HOM05D006098 ORTHO05D007470 1.3e-146 523.9 333 80.2
Sabra03G0019100 Salix brachista HOM05D006098 ORTHO05D007470 5.0e-146 521.9 481 59.5
PSO541G2197 Papaver somniferum HOM05D006098 ORTHO05D007470 1.9e-145 520.0 395 68.9
PSO675G7908 Papaver somniferum HOM05D006098 ORTHO05D007470 4.7e-144 515.4 387 69.8
unitig_37.g12121 Utricularia gibba HOM05D006098 ORTHO05D007470 7.4e-142 508.1 455 62.9
ATR0568G039 Amborella trichopoda HOM05D006098 ORTHO05D007470 3.7e-141 505.8 401 66.8
Sopen08g024170 Solanum pennellii HOM05D006098 ORTHO05D007470 8.2e-141 504.6 391 70.1
PGSC0003DMG400016110 Solanum tuberosum HOM05D006098 ORTHO05D007470 1.1e-140 504.2 391 70.3
CDE01G0744 Ceratophyllum demersum HOM05D006098 ORTHO05D007470 6.3e-133 478.4 391 64.2
AT4G19160 Arabidopsis thaliana HOM05D006098 ORTHO05D007470 1.4e-132 477.2 425 61.4
Peaxi162Scf00876g00435 Petunia axillaris HOM05D006098 ORTHO05D007470 5.3e-132 475.3 375 67.2
AL7G34930 Arabidopsis lyrata HOM05D006098 ORTHO05D007470 5.9e-131 471.9 395 64.1
Carub.0007s2199 Capsella rubella HOM05D006098 ORTHO05D007470 5.2e-127 458.8 422 59.2
SEGI_14227 Sequoiadendron giganteum HOM05D006098 ORTHO05D007470 1.5e-126 457.2 450 56.2
Aa31LG6G1850 Aethionema arabicum HOM05D006098 ORTHO05D007470 1.8e-124 450.3 391 62.1
Sp7g17860 Schrenkiella parvula HOM05D006098 ORTHO05D007470 5.0e-122 442.2 443 57.6
Manes.17G016300 Manihot esculenta HOM05D006098 ORTHO05D007470 1.9e-121 440.3 364 65.7
CARHR226030 Cardamine hirsuta HOM05D006098 ORTHO05D007470 1.2e-118 431.0 508 52.6
BcaC09g51434 Brassica carinata HOM05D006098 ORTHO05D007470 5.7e-118 428.7 409 59.9
Thhalv10025127m.g Eutrema salsugineum HOM05D006098 ORTHO05D007470 7.5e-118 428.3 429 58.3
C01p13160 Brassica napus HOM05D006098 ORTHO05D007470 2.8e-117 426.4 410 60.0
BolC1t01289H Brassica oleracea HOM05D006098 ORTHO05D007470 2.8e-117 426.4 410 60.0
BraA01t01058Z Brassica rapa HOM05D006098 ORTHO05D007470 7.0e-116 421.8 391 61.4
A01p11120 Brassica napus HOM05D006098 ORTHO05D007470 2.0e-115 420.2 404 59.4
BcaNung04007 Brassica carinata HOM05D006098 ORTHO05D007470 5.9e-115 418.7 424 56.4
A08p14200 Brassica napus HOM05D006098 ORTHO05D007470 1.7e-106 390.6 407 55.8
BraA08t33414Z Brassica rapa HOM05D006098 ORTHO05D007470 1.7e-106 390.6 407 55.8
BcaC01g00601 Brassica carinata HOM05D006098 ORTHO05D007470 3.9e-106 389.4 415 54.9
C03p81800 Brassica napus HOM05D006098 ORTHO05D007470 3.3e-105 386.3 412 55.6
BolC3t20457H Brassica oleracea HOM05D006098 ORTHO05D007470 3.3e-105 386.3 412 55.6
MSTRG.13909 Avicennia marina HOM05D006098 ORTHO05D007470 1.6e-104 384.0 324 63.9
CAN.G947.35 Capsicum annuum HOM05D006098 ORTHO05D007470 4.7e-104 382.5 378 59.0
BcaB04g18531 Brassica carinata HOM05D006098 ORTHO05D007470 4.4e-102 375.9 394 55.1
Gohir.D08G171101 Gossypium hirsutum HOM05D006098 ORTHO05D007470 3.2e-92 343.2 235 74.5
FAN27G0800 Fragaria x ananassa HOM05D006098 ORTHO05D007470 9.9e-86 321.6 239 70.7
Oeu042198.1 Olea europaea HOM05D006098 ORTHO05D007470 1.3e-72 278.1 420 48.1
AagrBONN_evm.TU.Sc2ySwM_368.631 Anthoceros agrestis HOM05D006098 ORTHO05D007470 3.0e-66 256.9 363 41.3
HanXRQChr05g0158621 Helianthus annuus HOM05D006098 ORTHO05D007470 5.8e-62 242.7 160 78.1
Pp3c12_14620 Physcomitrium patens HOM05D006098 ORTHO05D007470 5.8e-54 216.1 400 36.2
FvH4_2g37180 Fragaria vesca HOM05D006098 ORTHO05D007470 2.2e-53 214.2 139 76.3
Rhsim11G0035700 Rhododendron simsii HOM05D006098 ORTHO05D007470 1.4e-52 211.5 423 39.0
SMO364G0549 Selaginella moellendorffii HOM05D006098 ORTHO05D007470 1.2e-51 208.4 487 32.4
Oeu015533.1 Olea europaea HOM05D006098 ORTHO05D007470 3.7e-48 196.8 152 67.1
Hund11040 Selenicereus undatus HOM05D006098 ORTHO05D007470 6.3e-48 196.1 404 35.9
HanXRQChr11g0344761 Helianthus annuus HOM05D006098 ORTHO05D007470 4.6e-43 179.9 160 61.9
HanXRQChr09g0271561 Helianthus annuus HOM05D006098 ORTHO05D007470 1.4e-42 178.3 124 73.4
Eucgr.D02551 Eucalyptus grandis HOM05D006098 ORTHO05D007470 7.4e-41 172.6 117 73.5
Eucgr.D02550 Eucalyptus grandis HOM05D006098 ORTHO05D007470 1.7e-37 161.4 122 68.9
Peaxi162Scf00527g00718 Petunia axillaris HOM05D006098 ORTHO05D007470 2.8e-32 144.1 201 44.8
Pp3c4_2130 Physcomitrium patens HOM05D006098 ORTHO05D007470 2.0e-25 121.3 310 31.6
RcHm_v2.0_Chr4g0402301 Rosa chinensis HOM05D006098 ORTHO05D007470 7.0e-23 112.8 126 51.6
HanXRQChr11g0344831 Helianthus annuus HOM05D006098 ORTHO05D007470 2.6e-22 110.9 78 69.2
Prupe.1G352900 Prunus persica HOM05D006098 ORTHO05D007470 1.2e-19 102.1 79 65.8
Sc11g0006450 Simmondsia chinensis HOM05D007414 ORTHO05D009482 4.7e-11 73.6 383 24.5
Aa31sc19G30 Aethionema arabicum HOM05D006098 ORTHO05D007470 1.4e-10 72.0 212 30.7
Ah.12g062800 Amaranthus hybridus HOM05D007414 ORTHO05D009482 2.6e-09 67.8 276 27.2
Cre14.g621850 Chlamydomonas reinhardtii HOM05D006098 ORTHO05D007470 2.6e-09 67.8 238 27.3
Mapoly0007s0139 Marchantia polymorpha HOM05D007414 ORTHO05D009482 3.4e-09 67.4 420 25.2
AagrBONN_evm.TU.Sc2ySwM_362.1466 Anthoceros agrestis HOM05D007414 ORTHO05D009482 1.3e-08 65.5 415 23.6
AUR62032647 Chenopodium quinoa HOM05D007414 ORTHO05D009482 2.8e-08 64.3 271 24.4
Pp3c11_910 Physcomitrium patens HOM05D007414 ORTHO05D009482 2.8e-08 64.3 421 23.8
AUR62026859 Chenopodium quinoa HOM05D007414 ORTHO05D009482 4.9e-08 63.5 271 23.6
Manes.11G006000 Manihot esculenta HOM05D007414 ORTHO05D009482 2.4e-07 61.2 378 22.5
Cc02_g30210 Coffea canephora HOM05D007414 ORTHO05D009482 4.1e-07 60.5 276 26.1
Ciclev10028543m.g Citrus clementina HOM05D007414 ORTHO05D009482 5.4e-07 60.1 397 22.7
EL10Ac2g02800 Beta vulgaris HOM05D007414 ORTHO05D009482 7.0e-07 59.7 403 24.3
CsaV3_5G024500 Cucumis sativus L. HOM05D007414 ORTHO05D009482 7.0e-07 59.7 390 23.3
Hund13359 Selenicereus undatus HOM05D007414 ORTHO05D009482 7.0e-07 59.7 389 24.7
COL.COLO4_20658 Corchorus olitorius HOM05D007414 ORTHO05D009482 9.1e-07 59.3 279 24.4
Thecc.10G154500 Theobroma cacao HOM05D007414 ORTHO05D009482 9.1e-07 59.3 278 24.1
PSO384G0147 Papaver somniferum HOM05D007414 ORTHO05D009482 1.2e-06 58.9 352 23.6
Sabra01G0020000 Salix brachista HOM05D007414 ORTHO05D009482 1.6e-06 58.5 388 24.2
PGSC0003DMG400018334 Solanum tuberosum HOM05D007414 ORTHO05D009482 1.6e-06 58.5 361 24.1
arahy.Tifrunner.gnm1.ann1.XZAR1L Arachis hypogaea HOM05D007414 ORTHO05D009482 2.0e-06 58.2 352 23.0
CAN.G1045.37 Capsicum annuum HOM05D007414 ORTHO05D009482 2.0e-06 58.2 371 22.4
Aa31LG3G3710 Aethionema arabicum HOM05D006098 ORTHO05D007470 2.7e-06 57.8 59 50.8
Nitab4.5_0004955g0030 Nicotiana tabacum HOM05D007414 ORTHO05D009482 2.7e-06 57.8 365 23.8
FvH4_7g03070 Fragaria vesca HOM05D006097 ORTHO05D008538 3.5e-06 57.4 288 24.3
FAN06G2659 Fragaria x ananassa HOM05D007414 ORTHO05D009482 3.5e-06 57.4 288 24.3
Hma1.2p1_1202F.1_g266840 Hydrangea macrophylla HOM05D007414 ORTHO05D009482 3.5e-06 57.4 367 22.9
PSO339G0457 Papaver somniferum HOM05D007414 ORTHO05D009482 4.5e-06 57.0 400 22.8
Atru.chr12.1333 Acer truncatum HOM05D007414 ORTHO05D009482 5.9e-06 56.6 289 24.6
ClCG01G007530 Citrullus lanatus HOM05D007414 ORTHO05D009482 5.9e-06 56.6 282 23.0
arahy.Tifrunner.gnm1.ann1.GMDI7B Arachis hypogaea HOM05D007414 ORTHO05D009482 7.7e-06 56.2 350 23.4
TWI15G0498 Tripterygium wilfordii HOM05D007414 ORTHO05D009482 7.7e-06 56.2 292 23.6
GSVIVG01013487001 Vitis vinifera HOM05D007414 ORTHO05D009482 7.7e-06 56.2 276 24.6


User provided reference genes

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