Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu057105.1 Olea europaea HOM05D000026 ORTHO05D290363 1.0e-24 115.9 58 100.0
Oeu014363.1 Olea europaea HOM05D000026 ORTHO05D001292 1.5e-12 75.5 54 64.8
Oeu046936.1 Olea europaea HOM05D000026 ORTHO05D001292 2.2e-11 71.6 54 64.8
Nn1g07521 Nelumbo nucifera HOM05D000026 ORTHO05D001292 4.9e-11 70.5 54 64.8
MSTRG.13021 Avicennia marina HOM05D000026 ORTHO05D001292 1.1e-10 69.3 54 64.8
SGA_v2.0_scaffold42G15983 Striga asiatica HOM05D000026 ORTHO05D001292 2.4e-10 68.2 54 59.3
Aqoxy4G02293 Aquilegia oxysepala HOM05D000026 ORTHO05D001292 5.4e-10 67.0 54 66.7
Solyc07g065610.1 Solanum lycopersicum HOM05D000026 ORTHO05D001292 2.1e-09 65.1 54 59.3
Sopen07g033820 Solanum pennellii HOM05D000026 ORTHO05D001292 2.1e-09 65.1 54 59.3
Nitab4.5_0007415g0010 Nicotiana tabacum HOM05D000026 ORTHO05D001292 3.5e-09 64.3 55 61.8
Cc05_g14970 Coffea canephora HOM05D000026 ORTHO05D001292 4.6e-09 63.9 53 58.5
MSTRG.14488 Avicennia marina HOM05D000026 ORTHO05D001292 1.0e-08 62.8 54 61.1
DCAR_013237 Daucus carota HOM05D000026 ORTHO05D001292 2.3e-08 61.6 54 55.6
QL08p004008 Quercus lobata HOM05D000026 ORTHO05D001292 2.3e-08 61.6 53 60.4
Hma1.2p1_1402F.1_g281080 Hydrangea macrophylla HOM05D000026 ORTHO05D001292 3.0e-08 61.2 54 57.4
Nitab4.5_0002736g0030 Nicotiana tabacum HOM05D000026 ORTHO05D001292 3.0e-08 61.2 52 61.5
CAN.G623.11 Capsicum annuum HOM05D000026 ORTHO05D001292 3.9e-08 60.8 45 66.7
Ah.04g166600 Amaranthus hybridus HOM05D000026 ORTHO05D001292 6.6e-08 60.1 54 57.4
Prupe.6G024000 Prunus persica HOM05D000026 ORTHO05D001292 6.6e-08 60.1 49 63.3
EL10Ac4g07561 Beta vulgaris HOM05D000026 ORTHO05D017167 1.9e-07 58.5 53 62.3
AUR62017109 Chenopodium quinoa HOM05D000026 ORTHO05D001292 1.9e-07 58.5 42 71.4
AUR62036462 Chenopodium quinoa HOM05D000026 ORTHO05D001292 1.9e-07 58.5 42 71.4
Hma1.2p1_2829F.1_g329170 Hydrangea macrophylla HOM05D000026 ORTHO05D001292 2.5e-07 58.2 40 72.5
Phvul.008G279300 Phaseolus vulgaris HOM05D000026 ORTHO05D001292 2.5e-07 58.2 54 53.7
FAN25G3075 Fragaria x ananassa HOM05D000026 ORTHO05D001292 3.3e-07 57.8 55 52.7
arahy.Tifrunner.gnm1.ann1.W6VWGY Arachis hypogaea HOM05D000026 ORTHO05D001292 7.3e-07 56.6 54 53.7
arahy.Tifrunner.gnm1.ann1.YN37NC Arachis hypogaea HOM05D000026 ORTHO05D001292 7.3e-07 56.6 54 53.7
LjContig00081g0022422 Lotus japonicus HOM05D000026 ORTHO05D001292 7.3e-07 56.6 43 65.1
TWI38G0371 Tripterygium wilfordii HOM05D000026 ORTHO05D001292 7.3e-07 56.6 42 64.3
HanXRQChr11g0333331 Helianthus annuus HOM05D000026 ORTHO05D001292 9.5e-07 56.2 43 65.1
Sc03g0011430 Simmondsia chinensis HOM05D000026 ORTHO05D001292 9.5e-07 56.2 48 60.4
Actinidia35402 Actinidia chinensis HOM05D000026 ORTHO05D001292 1.2e-06 55.8 55 56.4
FvH4_3g42990 Fragaria vesca HOM05D000026 ORTHO05D001292 1.2e-06 55.8 48 58.3
FAN11G2488 Fragaria x ananassa HOM05D000026 ORTHO05D001292 1.2e-06 55.8 48 58.3
FAN11G3457 Fragaria x ananassa HOM05D000026 ORTHO05D001292 1.2e-06 55.8 48 58.3
FAN16G1032 Fragaria x ananassa HOM05D000026 ORTHO05D001292 1.2e-06 55.8 48 58.3
FAN21G1305 Fragaria x ananassa HOM05D000026 ORTHO05D001292 1.2e-06 55.8 48 58.3
Psat2g007240 Pisum sativum HOM05D000026 ORTHO05D001292 1.2e-06 55.8 59 52.5
VMungo0647G0640 Vigna mungo HOM05D000026 ORTHO05D001292 1.2e-06 55.8 43 62.8
Eucgr.F02045 Eucalyptus grandis HOM05D000026 ORTHO05D001292 1.6e-06 55.5 43 62.8
Lalb_Chr17g0348971 Lupinus albus HOM05D000026 ORTHO05D001292 1.6e-06 55.5 43 60.5
MD03G1026600 Malus domestica HOM05D000026 ORTHO05D001292 1.6e-06 55.5 54 53.7
Manes.15G059400 Manihot esculenta HOM05D000026 ORTHO05D001292 2.8e-06 54.7 42 64.3
RcHm_v2.0_Chr5g0077031 Rosa chinensis HOM05D000026 ORTHO05D001292 2.8e-06 54.7 45 60.0
Lj6g0028033 Lotus japonicus HOM05D000026 ORTHO05D001292 3.6e-06 54.3 42 61.9
TPR.G8613 Trifolium pratense HOM05D000026 ORTHO05D001292 3.6e-06 54.3 43 62.8
GSVIVG01014693001 Vitis vinifera HOM05D000026 ORTHO05D001292 4.7e-06 53.9 48 60.4
Migut.H01754 Erythranthe guttata HOM05D000026 ORTHO05D001292 6.2e-06 53.5 38 65.8
TAR626G0329 Trochodendron aralioides HOM05D000026 ORTHO05D001292 6.2e-06 53.5 54 48.1
CSS0043157 Camellia sinensis var. sinensis HOM05D000026 ORTHO05D001292 8.1e-06 53.1 45 57.8
CDE10G0133 Ceratophyllum demersum HOM05D000026 ORTHO05D001292 8.1e-06 53.1 44 63.6
Medtr3g460810 Medicago truncatula HOM05D000026 ORTHO05D001292 8.1e-06 53.1 54 51.9


User provided reference genes

Program Settings