Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu057079.1 Olea europaea HOM05D004336 ORTHO05D005367 0.0e+00 1110.1 540 100.0
Oeu057077.1 Olea europaea HOM05D004336 ORTHO05D005367 0.0e+00 1109.0 540 99.8
Nitab4.5_0010102g0040 Nicotiana tabacum HOM05D004336 ORTHO05D005367 1.0e-232 810.1 545 72.7
Peaxi162Scf00285g00932 Petunia axillaris HOM05D004336 ORTHO05D005367 3.2e-229 798.5 545 71.4
Solyc07g065140.4 Solanum lycopersicum HOM05D004336 ORTHO05D005367 7.0e-229 797.3 553 70.5
Nitab4.5_0001160g0150 Nicotiana tabacum HOM05D004336 ORTHO05D005367 9.2e-229 797.0 552 70.5
PGSC0003DMG400022194 Solanum tuberosum HOM05D004336 ORTHO05D005367 1.6e-228 796.2 554 71.5
MSTRG.13007 Avicennia marina HOM05D004336 ORTHO05D005367 6.0e-228 794.3 543 72.6
Sopen07g033360 Solanum pennellii HOM05D004336 ORTHO05D005367 1.3e-227 793.1 549 70.7
Migut.H01779 Erythranthe guttata HOM05D004336 ORTHO05D005367 3.3e-226 788.5 541 70.4
CAN.G337.39 Capsicum annuum HOM05D004336 ORTHO05D005367 1.2e-225 786.6 551 70.1
Dinv40824 Davidia involucrata HOM05D004336 ORTHO05D005367 3.7e-222 775.0 547 69.7
Actinidia05042 Actinidia chinensis HOM05D004336 ORTHO05D005367 1.6e-220 769.6 543 70.0
SGA_v2.0_scaffold478G52227 Striga asiatica HOM05D004336 ORTHO05D005367 1.6e-220 769.6 542 70.1
CSS0041250 Camellia sinensis var. sinensis HOM05D004336 ORTHO05D005367 1.0e-211 740.3 546 66.7
CSS0047700 Camellia sinensis var. sinensis HOM05D004336 ORTHO05D005367 1.0e-211 740.3 546 66.7
TAR627G0502 Trochodendron aralioides HOM05D004336 ORTHO05D005367 5.1e-211 738.0 551 66.4
CSS0014417 Camellia sinensis var. sinensis HOM05D004336 ORTHO05D005367 6.6e-211 737.6 546 66.3
CSS0044060 Camellia sinensis var. sinensis HOM05D004336 ORTHO05D005367 6.6e-211 737.6 546 66.3
Lsat_1_v5_gn_7_114040 Lactuca sativa HOM05D004336 ORTHO05D005367 4.0e-208 728.4 551 65.3
Actinidia00105 Actinidia chinensis HOM05D004336 ORTHO05D005367 9.0e-208 727.2 544 67.1
Nn1g03279 Nelumbo nucifera HOM05D004336 ORTHO05D005367 1.2e-204 716.8 549 64.8
Nn1g03281 Nelumbo nucifera HOM05D004336 ORTHO05D005367 1.2e-204 716.8 549 64.8
CSS0031037 Camellia sinensis var. sinensis HOM05D004336 ORTHO05D005367 7.8e-204 714.1 547 66.0
HanXRQChr17g0546171 Helianthus annuus HOM05D004336 ORTHO05D005367 7.8e-204 714.1 545 64.2
TWI38G0192 Tripterygium wilfordii HOM05D004336 ORTHO05D005367 1.3e-203 713.4 536 65.5
CSS0013990 Camellia sinensis var. sinensis HOM05D004336 ORTHO05D005367 6.6e-203 711.1 547 65.8
Prupe.4G229800 Prunus persica HOM05D004336 ORTHO05D005367 1.5e-202 709.9 554 64.4
vmacro11570 Vaccinium macrocarpon HOM05D004336 ORTHO05D005367 1.5e-202 709.9 539 65.7
FvH4_3g23790 Fragaria vesca HOM05D004336 ORTHO05D005367 7.3e-202 707.6 546 64.8
MD03G1190200 Malus domestica HOM05D004336 ORTHO05D005367 7.3e-202 707.6 553 64.9
FAN11G0890 Fragaria x ananassa HOM05D004336 ORTHO05D005367 1.3e-201 706.8 546 64.7
FAN25G1677 Fragaria x ananassa HOM05D004336 ORTHO05D005367 1.3e-201 706.8 546 64.7
Thecc.07G024300 Theobroma cacao HOM05D004336 ORTHO05D005367 8.1e-201 704.1 543 65.2
Lj1A883T40 Lonicera japonica HOM05D004336 ORTHO05D005367 1.4e-200 703.4 543 63.5
unitig_8.g4786 Utricularia gibba HOM05D004336 ORTHO05D005367 3.1e-200 702.2 540 64.4
Aqoxy1G04042 Aquilegia oxysepala HOM05D004336 ORTHO05D005367 9.0e-200 700.7 548 64.4
TWI38G0059 Tripterygium wilfordii HOM05D004336 ORTHO05D005367 1.5e-199 699.9 541 64.0
Manes.15G064500 Manihot esculenta HOM05D004336 ORTHO05D005367 7.6e-199 697.6 560 63.2
Duzib170G1061 Durio zibethinus HOM05D004336 ORTHO05D005367 1.7e-198 696.4 548 63.5
Cfa020245 Carpinus fangiana HOM05D004336 ORTHO05D005367 4.9e-198 694.9 540 65.4
Gohir.A01G085900 Gossypium hirsutum HOM05D004336 ORTHO05D005367 4.9e-198 694.9 546 64.3
COL.COLO4_09762 Corchorus olitorius HOM05D004336 ORTHO05D005367 1.4e-197 693.3 547 64.5
Potri.001G360600 Populus trichocarpa HOM05D004336 ORTHO05D005367 2.4e-197 692.6 549 64.5
FAN21G2219 Fragaria x ananassa HOM05D004336 ORTHO05D005367 9.3e-197 690.6 559 63.3
Gorai.002G095200 Gossypium raimondii HOM05D004336 ORTHO05D005367 4.6e-196 688.3 546 63.6
RcHm_v2.0_Chr5g0041971 Rosa chinensis HOM05D004336 ORTHO05D005367 6.0e-196 688.0 546 63.4
Haze_09771 Corylus avellana HOM05D004336 ORTHO05D005367 6.7e-195 684.5 540 65.4
Cpa.g.sc12.209 Carica papaya HOM05D004336 ORTHO05D005367 2.8e-193 679.1 552 62.0
Aqoxy4G01189 Aquilegia oxysepala HOM05D004336 ORTHO05D005367 4.8e-193 678.3 544 62.5
arahy.Tifrunner.gnm1.ann1.KR0ZCF Arachis hypogaea HOM05D004336 ORTHO05D005367 1.1e-192 677.2 549 61.6
CiPaw.11G199400 Carya illinoinensis HOM05D004336 ORTHO05D005367 1.4e-192 676.8 540 63.0
DCAR_016633 Daucus carota HOM05D004336 ORTHO05D005367 6.9e-192 674.5 547 61.4
PGR083G2301 Punica granatum HOM05D004336 ORTHO05D005367 6.9e-192 674.5 555 60.5
arahy.Tifrunner.gnm1.ann1.K6BPDT Arachis hypogaea HOM05D004336 ORTHO05D005367 9.0e-192 674.1 555 61.3
Atru.chr2.3600_Atru.chr2.3601 Acer truncatum HOM05D004336 ORTHO05D005367 2.0e-191 672.9 546 63.4
Lj8A175T74 Lonicera japonica HOM05D004336 ORTHO05D005367 9.9e-191 670.6 525 64.6
ClCG09G020990 Citrullus lanatus HOM05D004336 ORTHO05D005367 3.8e-190 668.7 551 61.7
Medtr3g055690 Medicago truncatula HOM05D004336 ORTHO05D005367 4.9e-190 668.3 548 61.9
Lj6g0007567 Lotus japonicus HOM05D004336 ORTHO05D005367 8.4e-190 667.5 552 62.7
CsaV3_7G018720 Cucumis sativus L. HOM05D004336 ORTHO05D005367 1.9e-189 666.4 546 61.4
Glyma.18G085100 Glycine max HOM05D004336 ORTHO05D005367 2.7e-188 662.5 541 63.2
BraA03t10701Z Brassica rapa HOM05D004336 ORTHO05D005367 1.0e-187 660.6 567 59.4
Gohir.D01G072200 Gossypium hirsutum HOM05D004336 ORTHO05D005367 1.3e-187 660.2 546 61.9
C03p16460 Brassica napus HOM05D004336 ORTHO05D005367 2.3e-187 659.4 566 59.4
A03p14020 Brassica napus HOM05D004336 ORTHO05D005367 3.0e-187 659.1 567 59.1
Carub.0008s1585 Capsella rubella HOM05D004336 ORTHO05D005367 1.1e-186 657.1 571 59.0
AT5G55500 Arabidopsis thaliana HOM05D004336 ORTHO05D005367 1.5e-186 656.8 569 59.6
BolC3t14066H Brassica oleracea HOM05D004336 ORTHO05D005367 2.5e-186 656.0 569 59.6
AL8G31030 Arabidopsis lyrata HOM05D004336 ORTHO05D005367 2.8e-185 652.5 571 58.5
Eucgr.F03516 Eucalyptus grandis HOM05D004336 ORTHO05D005367 4.8e-185 651.7 533 64.0
Sp6g17380 Schrenkiella parvula HOM05D004336 ORTHO05D005367 6.2e-185 651.4 565 59.5
Sed0018719 Sechium edule HOM05D004336 ORTHO05D005367 8.2e-185 651.0 546 60.8
Thhalv10013238m.g Eutrema salsugineum HOM05D004336 ORTHO05D005367 1.1e-184 650.6 565 59.6
Phvul.006G051000 Phaseolus vulgaris HOM05D004336 ORTHO05D005367 1.1e-184 650.6 540 61.5
MBI19_g06156_MAGBIO Magnolia biondii HOM05D004336 ORTHO05D005367 1.4e-184 650.2 540 61.3
PSO302G0308 Papaver somniferum HOM05D004336 ORTHO05D005367 1.4e-184 650.2 546 61.5
Ca_14783_v3 Cicer arietinum L. HOM05D004336 ORTHO05D005367 3.1e-184 649.0 553 60.6
Glyma.08G324900 Glycine max HOM05D004336 ORTHO05D005367 3.1e-184 649.0 533 61.9
CARHR268810 Cardamine hirsuta HOM05D004336 ORTHO05D005367 4.0e-184 648.7 580 58.6
Sed0027079 Sechium edule HOM05D004336 ORTHO05D005367 4.0e-184 648.7 545 60.4
Lalb_Chr18g0050361 Lupinus albus HOM05D004336 ORTHO05D005367 5.3e-184 648.3 557 59.2
Gohir.A04G010200 Gossypium hirsutum HOM05D004336 ORTHO05D005367 2.0e-183 646.4 547 60.3
PSO210G4424 Papaver somniferum HOM05D004336 ORTHO05D005367 7.6e-183 644.4 548 61.1
Aa31LG3G11440 Aethionema arabicum HOM05D004336 ORTHO05D005367 2.2e-182 642.9 555 60.0
Psat5g171920 Pisum sativum HOM05D004336 ORTHO05D005367 2.9e-182 642.5 548 61.1
Eucgr.F00628 Eucalyptus grandis HOM05D004336 ORTHO05D005367 6.5e-182 641.3 558 58.6
VMungo0540G2288 Vigna mungo HOM05D004336 ORTHO05D005367 1.4e-181 640.2 545 60.7
Gorai.009G445600 Gossypium raimondii HOM05D004336 ORTHO05D005367 2.5e-181 639.4 547 60.3
Gohir.D05G377800 Gossypium hirsutum HOM05D004336 ORTHO05D005367 9.3e-181 637.5 547 59.8
Glyma.08G324800 Glycine max HOM05D004336 ORTHO05D005367 3.5e-180 635.6 535 59.1
Glyma.18G085200 Glycine max HOM05D004336 ORTHO05D005367 3.5e-180 635.6 535 59.1
BcaC01g06371 Brassica carinata HOM05D004336 ORTHO05D005367 1.1e-176 624.0 559 58.5
Hund23166 Selenicereus undatus HOM05D004336 ORTHO05D005367 1.2e-175 620.5 538 58.9
THA.LOC104811644 Tarenaya hassleriana HOM05D004336 ORTHO05D005367 1.2e-175 620.5 560 56.1
MELO3C024890.2 Cucumis melo HOM05D004336 ORTHO05D005367 2.9e-174 615.9 544 58.1
EL10Ac4g07633 Beta vulgaris HOM05D004336 ORTHO05D005367 1.0e-171 607.4 547 56.5
Ciclev10008121m.g Citrus clementina HOM05D004336 ORTHO05D005367 1.3e-171 607.1 549 56.8
ATR0712G174 Amborella trichopoda HOM05D004336 ORTHO05D005367 5.7e-170 601.7 491 60.1
Duzib213G0745 Durio zibethinus HOM05D004336 ORTHO05D005367 9.7e-170 600.9 548 58.6
HPP92_018937 Vanilla planifolia HOM05D004336 ORTHO05D005367 3.7e-169 599.0 537 56.1
HPP92_018936 Vanilla planifolia HOM05D004336 ORTHO05D005367 5.3e-168 595.1 523 55.6
Hund01925 Selenicereus undatus HOM05D004336 ORTHO05D005367 2.0e-167 593.2 572 54.2
Rhsim06G0225600 Rhododendron simsii HOM05D004336 ORTHO05D005367 2.6e-167 592.8 446 66.8
Sc03g0008140 Simmondsia chinensis HOM05D004336 ORTHO05D005367 2.2e-166 589.7 437 65.9
ECA236G3940 Erigeron canadensis HOM05D004336 ORTHO05D005367 2.9e-166 589.3 504 60.5
Ah.04g166390 Amaranthus hybridus HOM05D004336 ORTHO05D005367 7.9e-164 581.3 487 58.3
Os08g0503800 Oryza sativa ssp. japonica HOM05D004336 ORTHO05D005367 1.1e-160 570.9 546 54.9
TPR.G23588 Trifolium pratense HOM05D004336 ORTHO05D005367 4.5e-159 565.5 417 66.2
SHI26554 Sapria himalayana HOM05D004336 ORTHO05D005367 8.0e-156 554.7 472 56.8
A10p12600 Brassica napus HOM05D004336 ORTHO05D005367 5.2e-147 525.4 475 56.4
EL10Ac4g07632 Beta vulgaris HOM05D004336 ORTHO05D005367 9.7e-146 521.2 471 54.8
AUR62040678 Chenopodium quinoa HOM05D004336 ORTHO05D005367 1.4e-144 517.3 406 62.1
GSVIVG01037759001 Vitis vinifera HOM05D004336 ORTHO05D005367 2.0e-143 513.5 335 72.8
Cc05_g14530 Coffea canephora HOM05D004336 ORTHO05D005367 2.5e-141 506.5 335 71.9
QL08p008529 Quercus lobata HOM05D004336 ORTHO05D005367 9.8e-138 494.6 290 78.3
RcHm_v2.0_Chr5g0041921 Rosa chinensis HOM05D004336 ORTHO05D005367 1.9e-133 480.3 298 74.2
Oeu019622.1 Olea europaea HOM05D004336 ORTHO05D005367 2.0e-130 470.3 241 92.5
CDE07G1634 Ceratophyllum demersum HOM05D004336 ORTHO05D005367 3.5e-127 459.5 335 64.5
Mapoly0007s0065 Marchantia polymorpha HOM05D004336 ORTHO05D005367 4.9e-121 439.1 496 43.3
Ah.06g181060 Amaranthus hybridus HOM05D004336 ORTHO05D005367 1.6e-119 434.1 288 68.1
AUR62015931 Chenopodium quinoa HOM05D004336 ORTHO05D005367 3.1e-115 419.9 406 53.9
Pp3c14_26580 Physcomitrium patens HOM05D004336 ORTHO05D005367 1.5e-109 401.0 543 40.1
Sabra16G0237900 Salix brachista HOM05D004336 ORTHO05D005367 2.8e-108 396.7 246 76.0
SMO347G0076 Selaginella moellendorffii HOM05D004336 ORTHO05D005367 1.4e-107 394.4 537 40.6
QL04p097747 Quercus lobata HOM05D004336 ORTHO05D005367 2.0e-106 390.6 238 76.9
BcaB08g35906 Brassica carinata HOM05D004336 ORTHO05D005367 8.1e-92 342.0 554 41.0
RcHm_v2.0_Chr5g0080011 Rosa chinensis HOM05D004336 ORTHO05D005367 5.1e-86 322.8 198 74.7
BraA10t43362Z Brassica rapa HOM05D004336 ORTHO05D005367 4.0e-83 313.2 363 49.6
MD11G1206800 Malus domestica HOM05D004336 ORTHO05D005367 1.6e-79 301.2 270 57.0
FvH4_3g12320 Fragaria vesca HOM05D004336 ORTHO05D005367 3.0e-78 297.0 225 63.6
Zm00001eb034690 Zea mays HOM05D004336 ORTHO05D005367 2.4e-75 287.3 348 46.3
BcaB01g04318 Brassica carinata HOM05D004336 ORTHO05D005367 3.2e-72 276.9 294 52.7
MD11G1206700 Malus domestica HOM05D004336 ORTHO05D005367 7.6e-66 255.8 166 72.3
MSTRG.14468 Avicennia marina HOM05D004336 ORTHO05D005367 3.6e-55 220.3 170 63.5
BolC9t57481H Brassica oleracea HOM05D004336 ORTHO05D005367 1.4e-54 218.4 250 50.4
C09p46150 Brassica napus HOM05D004336 ORTHO05D005367 8.8e-54 215.7 250 50.0
C09p46160 Brassica napus HOM05D004336 ORTHO05D005367 1.4e-51 208.4 157 65.6
A03p66870 Brassica napus HOM05D004336 ORTHO05D005367 3.4e-50 203.8 124 72.6
A04p06990 Brassica napus HOM05D004336 ORTHO05D005367 3.4e-50 203.8 130 70.0
BraA04t16398Z Brassica rapa HOM05D004336 ORTHO05D005367 3.4e-50 203.8 130 70.0
QL08p008521 Quercus lobata HOM05D004336 ORTHO05D005367 1.7e-49 201.4 219 50.7
AagrBONN_evm.TU.Sc2ySwM_228.1049 Anthoceros agrestis HOM05D004336 ORTHO05D005367 2.2e-44 184.5 175 50.3
CBR_g22021 Chara braunii HOM05D000019 ORTHO05D000048 1.4e-43 181.8 436 29.8
Eucgr.I00174 Eucalyptus grandis HOM05D004336 ORTHO05D005367 5.0e-41 173.3 109 77.1
BraA01t02793Z Brassica rapa HOM05D004336 ORTHO05D004660 1.4e-38 165.2 106 67.0
SHI26544 Sapria himalayana HOM05D004336 ORTHO05D005367 9.7e-37 159.1 166 50.0
SEGI_14116 Sequoiadendron giganteum HOM05D004336 ORTHO05D005367 9.1e-35 152.5 221 40.7
Ah.06g181050 Amaranthus hybridus HOM05D004336 ORTHO05D005367 4.5e-34 150.2 179 46.4
SHI22211 Sapria himalayana HOM05D004336 ORTHO05D005367 5.5e-32 143.3 291 33.0
SHI40288 Sapria himalayana HOM05D004336 ORTHO05D005367 1.2e-31 142.1 180 42.2
TAR627G0477 Trochodendron aralioides HOM05D000054 ORTHO05D000171 7.5e-29 132.9 95 67.4
CDE07G0680 Ceratophyllum demersum HOM05D004336 ORTHO05D005367 1.7e-28 131.7 124 54.8
BcaC04g20358 Brassica carinata HOM05D003513 ORTHO05D004660 2.2e-28 131.3 79 72.2
BolC9t57326H Brassica oleracea HOM05D004336 ORTHO05D005367 2.2e-28 131.3 79 72.2
AL8G29720 Arabidopsis lyrata HOM05D004336 ORTHO05D005367 3.7e-28 130.6 100 65.0
SHI48138 Sapria himalayana HOM05D004336 ORTHO05D005367 3.7e-28 130.6 294 33.3
BcaB05g23098 Brassica carinata HOM05D004336 ORTHO05D005367 1.7e-25 121.7 85 63.5
RcHm_v2.0_Chr5g0079391 Rosa chinensis HOM05D004336 ORTHO05D005367 5.0e-25 120.2 107 57.0
BcaB01g04317 Brassica carinata HOM05D004336 ORTHO05D005367 2.2e-20 104.8 72 72.2
HanXRQChr04g0109771 Helianthus annuus HOM05D004336 ORTHO05D005367 5.0e-17 93.6 127 42.5
A03p61430 Brassica napus HOM05D003513 ORTHO05D004660 1.9e-16 91.7 59 67.8
TAR612G0001 Trochodendron aralioides HOM05D000054 ORTHO05D000171 3.3e-08 64.3 34 94.1
AagrBONN_evm.TU.Sc2ySwM_228.1050 Anthoceros agrestis HOM05D004336 ORTHO05D005367 7.3e-08 63.2 217 27.2


User provided reference genes

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