Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu057036.1 Olea europaea HOM05D004987 ORTHO05D005960 8.2e-263 909.8 454 100.0
Oeu030104.1 Olea europaea HOM05D004987 ORTHO05D005960 8.3e-231 803.5 463 87.5
MSTRG.13111 Avicennia marina HOM05D004987 ORTHO05D005960 2.3e-220 768.8 463 83.2
MSTRG.14600 Avicennia marina HOM05D004987 ORTHO05D005960 8.9e-217 756.9 463 80.8
Migut.M01428 Erythranthe guttata HOM05D004987 ORTHO05D005960 4.9e-215 751.1 463 80.1
SalBow8G4301 Salvia bowleyana HOM05D004987 ORTHO05D005960 8.3e-215 750.4 463 81.0
SGA_v2.0_scaffold54G19512 Striga asiatica HOM05D004987 ORTHO05D005960 1.4e-214 749.6 463 80.3
SGA_v2.0_scaffold111G31506 Striga asiatica HOM05D004987 ORTHO05D005960 1.1e-211 740.0 483 77.4
Peaxi162Scf00488g00925 Petunia axillaris HOM05D004987 ORTHO05D005960 2.5e-203 712.2 476 74.2
CAN.G9.5 Capsicum annuum HOM05D004987 ORTHO05D005960 9.5e-203 710.3 473 74.4
Hma1.2p1_0657F.1_g196910 Hydrangea macrophylla HOM05D004987 ORTHO05D005960 3.6e-202 708.4 478 74.3
Nitab4.5_0000318g0050 Nicotiana tabacum HOM05D004987 ORTHO05D005960 3.6e-202 708.4 473 74.4
PGSC0003DMG400025463 Solanum tuberosum HOM05D004987 ORTHO05D005960 1.4e-201 706.4 474 74.7
ECA248G1395 Erigeron canadensis HOM05D004987 ORTHO05D005960 1.8e-201 706.1 478 74.1
Sopen08g019660 Solanum pennellii HOM05D004987 ORTHO05D005960 4.0e-201 704.9 473 73.6
Sed0000076 Sechium edule HOM05D004987 ORTHO05D005960 1.2e-200 703.4 478 72.8
Solyc08g065990.3 Solanum lycopersicum HOM05D004987 ORTHO05D005960 1.5e-200 703.0 473 73.4
Dinv01708 Davidia involucrata HOM05D004987 ORTHO05D005960 4.4e-200 701.4 490 73.1
Actinidia26840 Actinidia chinensis HOM05D004987 ORTHO05D005960 3.7e-199 698.4 483 72.3
CsaV3_1G015810 Cucumis sativus L. HOM05D004987 ORTHO05D005960 6.4e-199 697.6 479 72.2
QL05p068327 Quercus lobata HOM05D004987 ORTHO05D005960 1.9e-198 696.0 477 72.3
QL05p068818 Quercus lobata HOM05D004987 ORTHO05D005960 1.9e-198 696.0 477 72.3
ClCG01G010690 Citrullus lanatus HOM05D004987 ORTHO05D005960 2.4e-198 695.7 479 71.8
Cc09_g00600 Coffea canephora HOM05D004987 ORTHO05D005960 2.1e-197 692.6 485 72.0
CANSAT01G2438 Cannabis sativa HOM05D004987 ORTHO05D005960 3.5e-197 691.8 481 71.1
GSVIVG01007214001 Vitis vinifera HOM05D004987 ORTHO05D005960 4.6e-197 691.4 479 72.7
CiPaw.09G105700 Carya illinoinensis HOM05D004987 ORTHO05D005960 1.3e-196 689.9 478 71.3
CiPaw.10G079900 Carya illinoinensis HOM05D004987 ORTHO05D005960 1.7e-196 689.5 478 71.5
Lsat_1_v5_gn_6_62021 Lactuca sativa HOM05D004987 ORTHO05D005960 1.9e-195 686.0 475 73.3
CSS0019037 Camellia sinensis var. sinensis HOM05D004987 ORTHO05D005960 3.3e-195 685.3 476 72.1
Ciclev10015100m.g Citrus clementina HOM05D004987 ORTHO05D005960 3.3e-195 685.3 477 72.3
MD00G1058500 Malus domestica HOM05D004987 ORTHO05D005960 7.3e-195 684.1 477 70.9
unitig_749.g13618 Utricularia gibba HOM05D004987 ORTHO05D005960 7.3e-195 684.1 463 73.2
CSS0028023 Camellia sinensis var. sinensis HOM05D004987 ORTHO05D005960 2.8e-194 682.2 477 71.7
FvH4_3g00590 Fragaria vesca HOM05D004987 ORTHO05D005960 2.8e-194 682.2 476 72.3
TAR627G0360 Trochodendron aralioides HOM05D004987 ORTHO05D005960 2.8e-194 682.2 485 71.3
RcHm_v2.0_Chr5g0000801 Rosa chinensis HOM05D004987 ORTHO05D005960 4.7e-194 681.4 476 71.8
TAR626G0553 Trochodendron aralioides HOM05D004987 ORTHO05D005960 4.7e-194 681.4 483 71.2
HanXRQChr01g0004771 Helianthus annuus HOM05D004987 ORTHO05D005960 8.1e-194 680.6 474 71.7
Haze_06979 Corylus avellana HOM05D004987 ORTHO05D005960 1.1e-193 680.2 505 67.9
CSS0011246 Camellia sinensis var. sinensis HOM05D004987 ORTHO05D005960 1.8e-193 679.5 476 71.6
Glyma.07G266900 Glycine max HOM05D004987 ORTHO05D005960 1.8e-193 679.5 475 71.2
Manes.09G081692 Manihot esculenta HOM05D004987 ORTHO05D005960 5.2e-193 677.9 477 71.3
FAN25G3815 Fragaria x ananassa HOM05D004987 ORTHO05D005960 6.8e-193 677.6 476 71.6
Glyma.17G007300 Glycine max HOM05D004987 ORTHO05D005960 1.5e-192 676.4 475 70.7
Prupe.4G007100 Prunus persica HOM05D004987 ORTHO05D005960 1.5e-192 676.4 479 70.6
DCAR_014269 Daucus carota HOM05D004987 ORTHO05D005960 2.0e-192 676.0 479 71.4
Nn1g07472 Nelumbo nucifera HOM05D004987 ORTHO05D005960 2.6e-192 675.6 481 70.3
Potri.006G017000 Populus trichocarpa HOM05D004987 ORTHO05D005960 4.4e-192 674.9 479 70.1
AUR62018393 Chenopodium quinoa HOM05D004987 ORTHO05D005960 9.9e-192 673.7 480 69.4
Gohir.A06G204500 Gossypium hirsutum HOM05D004987 ORTHO05D005960 2.9e-191 672.2 480 70.2
VMungo1215G0994 Vigna mungo HOM05D004987 ORTHO05D005960 2.9e-191 672.2 475 70.1
Ah.02g126930 Amaranthus hybridus HOM05D004987 ORTHO05D005960 1.1e-190 670.2 475 70.1
Psat5g004720 Pisum sativum HOM05D004987 ORTHO05D005960 1.9e-190 669.5 475 69.5
TWI38G0401 Tripterygium wilfordii HOM05D004987 ORTHO05D005960 1.9e-190 669.5 471 70.5
Gorai.010G249200 Gossypium raimondii HOM05D004987 ORTHO05D005960 4.1e-190 668.3 480 70.0
Thecc.06G237200 Theobroma cacao HOM05D004987 ORTHO05D005960 9.2e-190 667.2 479 69.9
Phvul.003G085301 Phaseolus vulgaris HOM05D004987 ORTHO05D005960 1.2e-189 666.8 475 70.1
Gohir.D06G217000 Gossypium hirsutum HOM05D004987 ORTHO05D005960 2.1e-189 666.0 480 70.0
Lj4g0022097 Lotus japonicus HOM05D004987 ORTHO05D005960 1.0e-188 663.7 475 69.3
Nitab4.5_0002021g0020 Nicotiana tabacum HOM05D004987 ORTHO05D005960 1.0e-188 663.7 474 71.1
Atru.chr3.1439 Acer truncatum HOM05D004987 ORTHO05D005960 3.0e-188 662.1 476 70.4
Medtr3g117360 Medicago truncatula HOM05D004987 ORTHO05D005960 5.1e-188 661.4 480 68.8
Duzib235G0100 Durio zibethinus HOM05D004987 ORTHO05D005960 6.6e-188 661.0 479 69.3
Lalb_Chr20g0119411 Lupinus albus HOM05D004987 ORTHO05D005960 8.7e-188 660.6 480 68.5
MBI19_g25589_MAGBIO Magnolia biondii HOM05D004987 ORTHO05D005960 1.1e-187 660.2 481 69.9
Lj2C259G8 Lonicera japonica HOM05D004987 ORTHO05D005960 1.5e-187 659.8 466 72.5
arahy.Tifrunner.gnm1.ann1.158NIU Arachis hypogaea HOM05D004987 ORTHO05D005960 2.5e-187 659.1 483 68.1
Aa31LG2G12480 Aethionema arabicum HOM05D004987 ORTHO05D005960 3.3e-187 658.7 471 69.0
EL10Ac3g07283 Beta vulgaris HOM05D004987 ORTHO05D005960 5.6e-187 657.9 479 68.5
arahy.Tifrunner.gnm1.ann1.K2RD5P Arachis hypogaea HOM05D004987 ORTHO05D005960 7.3e-187 657.5 483 68.1
PGR004G2886 Punica granatum HOM05D004987 ORTHO05D005960 1.6e-186 656.4 480 66.9
arahy.Tifrunner.gnm1.ann1.URKQ8K Arachis hypogaea HOM05D004987 ORTHO05D005960 6.2e-186 654.4 495 66.7
Ca_15341_v3 Cicer arietinum L. HOM05D004987 ORTHO05D005960 8.1e-186 654.1 475 68.2
AL7G38570 Arabidopsis lyrata HOM05D004987 ORTHO05D005960 5.2e-185 651.4 477 69.2
Carub.0007s2509 Capsella rubella HOM05D004987 ORTHO05D005960 5.2e-185 651.4 474 68.6
vmacro03626 Vaccinium macrocarpon HOM05D004987 ORTHO05D005960 5.2e-185 651.4 484 68.6
CDE07G0546 Ceratophyllum demersum HOM05D004987 ORTHO05D005960 1.3e-183 646.7 469 69.1
AT4G16440 Arabidopsis thaliana HOM05D004987 ORTHO05D005960 4.9e-183 644.8 477 68.6
Aqoxy5G03428 Aquilegia oxysepala HOM05D004987 ORTHO05D005960 1.9e-182 642.9 507 63.5
BcaNung00197 Brassica carinata HOM05D004987 ORTHO05D005960 7.1e-182 641.0 474 67.9
Thhalv10025117m.g Eutrema salsugineum HOM05D004987 ORTHO05D005960 7.1e-182 641.0 474 68.4
Sp7g14970 Schrenkiella parvula HOM05D004987 ORTHO05D005960 2.7e-181 639.0 474 68.4
BcaC09g50343 Brassica carinata HOM05D004987 ORTHO05D005960 4.6e-181 638.3 474 67.7
BolC1t02590H Brassica oleracea HOM05D004987 ORTHO05D005960 4.6e-181 638.3 474 67.7
Rhsim13G0142900 Rhododendron simsii HOM05D004987 ORTHO05D005960 7.8e-181 637.5 456 70.4
A01p21160 Brassica napus HOM05D004987 ORTHO05D005960 1.0e-180 637.1 474 67.7
arahy.Tifrunner.gnm1.ann1.016YCC Arachis hypogaea HOM05D004987 ORTHO05D005960 5.1e-180 634.8 517 63.4
C01p26430 Brassica napus HOM05D004987 ORTHO05D005960 6.6e-180 634.4 474 67.3
PSO017G3064 Papaver somniferum HOM05D004987 ORTHO05D005960 6.6e-180 634.4 488 67.4
PSO675G1563 Papaver somniferum HOM05D004987 ORTHO05D005960 1.9e-179 632.9 487 66.5
CARHR222790 Cardamine hirsuta HOM05D004987 ORTHO05D005960 5.6e-179 631.3 476 66.2
Sc13g0000910 Simmondsia chinensis HOM05D004987 ORTHO05D005960 7.3e-179 630.9 442 69.2
Lsat_1_v5_gn_0_32381 Lactuca sativa HOM05D004987 ORTHO05D005960 9.6e-179 630.6 458 71.4
MELO3C025535.2 Cucumis melo HOM05D004987 ORTHO05D005960 3.6e-178 628.6 415 73.7
ATR0594G143 Amborella trichopoda HOM05D004987 ORTHO05D005960 4.8e-178 628.2 486 65.4
Zm00001eb214910 Zea mays HOM05D004987 ORTHO05D005960 4.0e-177 625.2 473 64.5
BraA01t02026Z Brassica rapa HOM05D004987 ORTHO05D005960 5.3e-177 624.8 498 64.7
Medtr4g062080 Medicago truncatula HOM05D004987 ORTHO05D005960 6.9e-177 624.4 479 64.9
Zm00001eb057200 Zea mays HOM05D004987 ORTHO05D005960 1.2e-176 623.6 472 64.6
Sabra16G0013000 Salix brachista HOM05D004987 ORTHO05D005960 7.6e-176 620.9 567 58.0
Os03g0748700 Oryza sativa ssp. japonica HOM05D004987 ORTHO05D005960 9.9e-176 620.5 471 65.2
TPR.G32192 Trifolium pratense HOM05D004987 ORTHO05D005960 1.8e-172 609.8 432 69.9
SHI24440 Sapria himalayana HOM05D004987 ORTHO05D005960 5.8e-168 594.7 493 61.7
Cc10_g02370 Coffea canephora HOM05D004987 ORTHO05D005960 8.4e-167 590.9 552 58.7
Eucgr.D01441 Eucalyptus grandis HOM05D004987 ORTHO05D005960 2.1e-165 586.3 430 68.4
Lj2g0000431 Lotus japonicus HOM05D004987 ORTHO05D005960 1.8e-164 583.2 468 63.5
Lsat_1_v5_gn_6_62041 Lactuca sativa HOM05D004987 ORTHO05D005960 1.9e-163 579.7 474 63.7
Sabra06G0012100 Salix brachista HOM05D004987 ORTHO05D005960 4.3e-163 578.6 513 60.0
AagrBONN_evm.TU.Sc2ySwM_368.1142 Anthoceros agrestis HOM05D004987 ORTHO05D005960 1.4e-161 573.5 486 59.1
AUR62030265 Chenopodium quinoa HOM05D004987 ORTHO05D005960 1.4e-161 573.5 415 68.9
SMO356G0034 Selaginella moellendorffii HOM05D004987 ORTHO05D005960 7.4e-155 551.2 468 59.6
Mapoly0020s0065 Marchantia polymorpha HOM05D004987 ORTHO05D005960 3.8e-151 538.9 486 58.0
MD10G1336400 Malus domestica HOM05D004987 ORTHO05D005960 1.9e-150 536.6 423 65.5
Pp3c6_16630 Physcomitrium patens HOM05D004987 ORTHO05D005960 2.5e-147 526.2 476 55.5
vmacro23178 Vaccinium macrocarpon HOM05D004987 ORTHO05D005960 6.3e-146 521.5 412 65.5
Potri.016G008700 Populus trichocarpa HOM05D004987 ORTHO05D005960 5.0e-135 485.3 355 70.7
Cpa.g.sc27.253 Carica papaya HOM05D004987 ORTHO05D005960 4.1e-129 465.7 461 54.9
CsaV3_UNG059470 Cucumis sativus L. HOM05D004987 ORTHO05D005960 3.5e-128 462.6 490 52.4
SEGI_15851 Sequoiadendron giganteum HOM05D004987 ORTHO05D005960 1.7e-98 364.0 253 65.6
Cre03.g200550 Chlamydomonas reinhardtii HOM05D004987 ORTHO05D005960 6.2e-93 345.5 597 37.7
MCO07G565 Micromonas commoda HOM05D004987 ORTHO05D005960 5.1e-87 325.9 519 39.9
HPP92_013953 Vanilla planifolia HOM05D004987 ORTHO05D005960 3.6e-85 319.7 256 65.2
Ciclev10027102m.g Citrus clementina HOM05D004987 ORTHO05D005960 1.1e-78 298.1 182 73.1
AagrBONN_evm.TU.Sc2ySwM_368.3306 Anthoceros agrestis HOM05D004987 ORTHO05D005960 1.8e-76 290.8 210 64.3
Lsat_1_v5_gn_6_62060 Lactuca sativa HOM05D004987 ORTHO05D005960 2.6e-75 287.0 215 72.1
ATR0751G100 Amborella trichopoda HOM05D004987 ORTHO05D005960 2.1e-72 277.3 256 54.7
PRCOL_00000051 Prasinoderma coloniale HOM05D004987 ORTHO05D005960 7.3e-70 268.9 538 34.6
Atru.chr1.2336 Acer truncatum HOM05D004987 ORTHO05D005960 2.1e-64 250.8 381 44.1
Ciclev10004004m.g Citrus clementina HOM05D004987 ORTHO05D005960 1.1e-60 238.4 175 63.4
FAN21G3552 Fragaria x ananassa HOM05D004987 ORTHO05D005960 1.1e-57 228.4 181 70.7
TWI38G1931 Tripterygium wilfordii HOM05D004987 ORTHO05D005960 1.6e-56 224.6 250 49.6
Aqoxy4G02991 Aquilegia oxysepala HOM05D000252 ORTHO05D000307 2.4e-52 210.7 172 62.2
Cfa026410 Carpinus fangiana HOM05D004987 ORTHO05D005960 1.5e-51 208.0 476 33.4
arahy.Tifrunner.gnm1.ann1.24PAJQ Arachis hypogaea HOM05D004987 ORTHO05D005960 2.1e-45 187.6 428 34.8
CBR_g26339 Chara braunii HOM05D004987 ORTHO05D005960 1.8e-39 167.9 340 35.0
Cre03.g199800 Chlamydomonas reinhardtii HOM05D004987 ORTHO05D005960 3.1e-36 157.1 446 27.8
Cre09.g396600 Chlamydomonas reinhardtii HOM05D004987 ORTHO05D005960 2.0e-35 154.5 445 27.9
arahy.Tifrunner.gnm1.ann1.4D4U0P Arachis hypogaea HOM05D004987 ORTHO05D005960 1.3e-34 151.8 212 45.3
Aqoxy6G02697 Aquilegia oxysepala HOM05D004987 ORTHO05D005960 1.4e-33 148.3 220 41.8
arahy.Tifrunner.gnm1.ann1.GKV1XW Arachis hypogaea HOM05D004987 ORTHO05D005960 4.2e-17 93.6 175 37.1
AagrBONN_evm.TU.Sc2ySwM_368.1145 Anthoceros agrestis HOM05D004987 ORTHO05D005960 3.9e-15 87.0 106 45.3
GSVIVG01005416001 Vitis vinifera HOM05D004987 ORTHO05D005960 4.1e-12 77.0 65 64.6
MELO3C000413.2 Cucumis melo HOM05D004987 ORTHO05D005960 1.2e-11 75.5 65 61.5
TPR.G35318 Trifolium pratense HOM05D004987 ORTHO05D005960 3.5e-11 73.9 62 59.7
arahy.Tifrunner.gnm1.ann1.YI5A3W Arachis hypogaea HOM05D004987 ORTHO05D005960 1.9e-09 68.2 61 59.0
PSO339G0319 Papaver somniferum HOM05D004987 ORTHO05D005960 6.1e-08 63.2 69 46.4
arahy.Tifrunner.gnm1.ann1.028TPL Arachis hypogaea HOM05D004987 ORTHO05D005960 1.0e-07 62.4 70 48.6
PSO832G0476 Papaver somniferum HOM05D000145 ORTHO05D001435 2.3e-07 61.2 68 45.6
arahy.Tifrunner.gnm1.ann1.N1GFR4 Arachis hypogaea HOM05D004987 ORTHO05D005960 4.0e-07 60.5 51 49.0


User provided reference genes

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