Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu057031.1 Olea europaea HOM05D007365 ORTHO05D009309 7.5e-104 380.6 196 100.0
GSVIVG01003482001 Vitis vinifera HOM05D007365 ORTHO05D009309 9.6e-51 204.1 195 59.0
GSVIVG01004669001 Vitis vinifera HOM05D007365 ORTHO05D009309 8.1e-50 201.1 195 57.9
Rhsim13G0142400 Rhododendron simsii HOM05D007365 ORTHO05D009309 1.7e-47 193.4 199 56.8
QL05p068234 Quercus lobata HOM05D007365 ORTHO05D009309 3.2e-46 189.1 183 56.3
Cfa000056 Carpinus fangiana HOM05D007365 ORTHO05D009309 9.3e-46 187.6 172 61.6
MSTRG.7141 Avicennia marina HOM05D007365 ORTHO05D009309 2.7e-45 186.0 198 55.6
Haze_06998 Corylus avellana HOM05D007365 ORTHO05D009309 3.5e-45 185.7 196 55.1
Thecc.06G237900 Theobroma cacao HOM05D007365 ORTHO05D009309 6.0e-45 184.9 206 53.4
Lj2P258T31 Lonicera japonica HOM05D007365 ORTHO05D009309 7.8e-45 184.5 124 73.4
CAN.G1156.8 Capsicum annuum HOM05D007365 ORTHO05D009309 3.9e-44 182.2 195 53.3
TAR629G1651 Trochodendron aralioides HOM05D007365 ORTHO05D009309 6.6e-44 181.4 149 62.4
Duzib235G0282 Durio zibethinus HOM05D007365 ORTHO05D009309 1.5e-43 180.3 150 64.0
Sabra06G0012500 Salix brachista HOM05D007365 ORTHO05D009309 1.5e-43 180.3 201 49.8
Sopen11g007370 Solanum pennellii HOM05D007365 ORTHO05D009309 1.9e-43 179.9 194 55.2
Nn1g07480 Nelumbo nucifera HOM05D007365 ORTHO05D009309 2.5e-43 179.5 206 51.0
SGA_v2.0_scaffold7G03712 Striga asiatica HOM05D007365 ORTHO05D009309 2.5e-43 179.5 142 66.9
PGSC0003DMG400013294 Solanum tuberosum HOM05D007365 ORTHO05D009309 7.3e-43 177.9 197 54.3
Potri.006G017500 Populus trichocarpa HOM05D007365 ORTHO05D009309 9.6e-43 177.6 203 50.2
Solyc11g012640.1 Solanum lycopersicum HOM05D007365 ORTHO05D009309 9.6e-43 177.6 194 55.2
CSS0050100 Camellia sinensis var. sinensis HOM05D007365 ORTHO05D009309 1.3e-42 177.2 201 51.7
CANSAT56G0830 Cannabis sativa HOM05D007365 ORTHO05D009309 1.4e-41 173.7 184 53.8
Nitab4.5_0001668g0010 Nicotiana tabacum HOM05D007365 ORTHO05D009309 1.4e-41 173.7 197 51.8
PSO017G7035 Papaver somniferum HOM05D007365 ORTHO05D009309 2.4e-41 172.9 189 50.3
MBI19_g37436_MAGBIO Magnolia biondii HOM05D007365 ORTHO05D009309 4.0e-41 172.2 190 52.6
Prupe.4G006400 Prunus persica HOM05D007365 ORTHO05D009309 4.0e-41 172.2 193 51.8
Manes.08G070500 Manihot esculenta HOM05D007365 ORTHO05D009309 5.3e-41 171.8 184 52.2
Sc05g0009760 Simmondsia chinensis HOM05D007365 ORTHO05D009309 9.0e-41 171.0 202 51.5
TWI63G0678 Tripterygium wilfordii HOM05D007365 ORTHO05D009309 9.0e-41 171.0 198 53.0
Dinv15365 Davidia involucrata HOM05D007365 ORTHO05D009309 1.2e-40 170.6 97 87.6
Ciclev10016816m.g Citrus clementina HOM05D007365 ORTHO05D009309 3.4e-40 169.1 193 47.7
Sed0008513 Sechium edule HOM05D007365 ORTHO05D009309 4.5e-40 168.7 188 50.5
PSO170G2578 Papaver somniferum HOM05D007365 ORTHO05D009309 5.8e-40 168.3 188 50.0
TPR.G5966 Trifolium pratense HOM05D007365 ORTHO05D009309 1.7e-39 166.8 207 47.8
Hma1.2p1_0657F.1_g196870 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 2.9e-39 166.0 194 49.0
Hma1.2p1_1963F.1_g309285 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 2.9e-39 166.0 194 49.0
Gohir.A06G155600 Gossypium hirsutum HOM05D007365 ORTHO05D009309 4.9e-39 165.2 114 70.2
Gorai.010G189000 Gossypium raimondii HOM05D007365 ORTHO05D009309 4.9e-39 165.2 114 70.2
ClCG01G021340 Citrullus lanatus HOM05D007365 ORTHO05D009309 1.1e-38 164.1 187 48.1
FvH4_3g00530 Fragaria vesca HOM05D007365 ORTHO05D009309 3.2e-38 162.5 186 51.1
Gohir.D06G162000 Gossypium hirsutum HOM05D007365 ORTHO05D009309 3.2e-38 162.5 185 50.8
HanXRQChr10g0285121 Helianthus annuus HOM05D007365 ORTHO05D009309 3.2e-38 162.5 114 71.1
FAN21G3283 Fragaria x ananassa HOM05D007365 ORTHO05D009309 5.4e-38 161.8 109 74.3
MELO3C007446.2 Cucumis melo HOM05D007365 ORTHO05D009309 7.1e-38 161.4 108 70.4
Medtr4g133770 Medicago truncatula HOM05D007365 ORTHO05D009309 7.1e-38 161.4 199 47.7
Cc09_g00550 Coffea canephora HOM05D007365 ORTHO05D009309 9.3e-38 161.0 130 66.2
CsaV3_6G048350 Cucumis sativus L. HOM05D007365 ORTHO05D009309 1.6e-37 160.2 108 70.4
Migut.M01433 Erythranthe guttata HOM05D007365 ORTHO05D009309 2.7e-37 159.5 203 46.8
FAN25G1820 Fragaria x ananassa HOM05D007365 ORTHO05D009309 2.7e-37 159.5 186 50.0
Psat4g002120 Pisum sativum HOM05D007365 ORTHO05D009309 2.7e-37 159.5 195 47.2
Ca_21002_v3 Cicer arietinum L. HOM05D007365 ORTHO05D009309 3.5e-37 159.1 100 74.0
RcHm_v2.0_Chr5g0000731 Rosa chinensis HOM05D007365 ORTHO05D009309 3.5e-37 159.1 193 51.8
MD00G1057700 Malus domestica HOM05D007365 ORTHO05D009309 4.6e-37 158.7 187 48.7
Atru.chr1.2317 Acer truncatum HOM05D007365 ORTHO05D009309 6.0e-37 158.3 123 63.4
PGR004G1025 Punica granatum HOM05D007365 ORTHO05D009309 7.9e-37 157.9 116 66.4
Eucgr.D01449 Eucalyptus grandis HOM05D007365 ORTHO05D009309 1.3e-36 157.1 199 46.7
Carub.0007s2512 Capsella rubella HOM05D007365 ORTHO05D009309 1.8e-36 156.8 150 56.0
Eucgr.D01445 Eucalyptus grandis HOM05D007365 ORTHO05D009309 1.8e-36 156.8 201 44.8
Eucgr.L00170 Eucalyptus grandis HOM05D007365 ORTHO05D009309 1.8e-36 156.8 201 44.8
THA.LOC104814483 Tarenaya hassleriana HOM05D007365 ORTHO05D009309 1.8e-36 156.8 126 59.5
Aqoxy1G04233 Aquilegia oxysepala HOM05D007365 ORTHO05D009309 2.3e-36 156.4 184 50.5
unitig_37.g12181 Utricularia gibba HOM05D007365 ORTHO05D009309 3.9e-36 155.6 160 51.9
ATR0624G051 Amborella trichopoda HOM05D007365 ORTHO05D009309 6.7e-36 154.8 179 52.0
ECA248G3442 Erigeron canadensis HOM05D000864 ORTHO05D002353 6.7e-36 154.8 181 49.7
AL7G38600 Arabidopsis lyrata HOM05D007365 ORTHO05D009309 8.7e-36 154.5 135 59.3
AT4G16410 Arabidopsis thaliana HOM05D007365 ORTHO05D009309 1.5e-35 153.7 150 54.0
Thhalv10026910m.g Eutrema salsugineum HOM05D007365 ORTHO05D009309 1.5e-35 153.7 133 57.1
CARHR222780 Cardamine hirsuta HOM05D007365 ORTHO05D009309 2.5e-35 152.9 174 48.9
Lj4g0011771 Lotus japonicus HOM05D007365 ORTHO05D009309 2.5e-35 152.9 198 46.5
TAR629G0160 Trochodendron aralioides HOM05D007365 ORTHO05D009309 2.5e-35 152.9 94 77.7
Sp7g14940 Schrenkiella parvula HOM05D007365 ORTHO05D009309 9.6e-35 151.0 123 61.8
A03p49790 Brassica napus HOM05D007365 ORTHO05D009309 1.6e-34 150.2 130 61.5
BraA03t14074Z Brassica rapa HOM05D007365 ORTHO05D009309 1.6e-34 150.2 130 61.5
Lalb_Chr07g0176961 Lupinus albus HOM05D007365 ORTHO05D009309 1.6e-34 150.2 106 69.8
EL10Ac8g20243 Beta vulgaris HOM05D007365 ORTHO05D009309 2.8e-34 149.4 101 74.3
BolC7t45307H Brassica oleracea HOM05D007365 ORTHO05D009309 3.7e-34 149.1 130 60.8
C07p47850 Brassica napus HOM05D007365 ORTHO05D009309 6.2e-34 148.3 130 60.8
CiPaw.09G107000 Carya illinoinensis HOM05D007365 ORTHO05D009309 1.1e-33 147.5 155 54.2
VMungo1215G0355 Vigna mungo HOM05D007365 ORTHO05D009309 1.4e-33 147.1 108 63.9
DCAR_030849 Daucus carota HOM05D007365 ORTHO05D009309 1.8e-33 146.7 95 74.7
Glyma.17G007100 Glycine max HOM05D007365 ORTHO05D009309 1.8e-33 146.7 108 65.7
Cpa.g.sc1092.2 Carica papaya HOM05D007365 ORTHO05D009309 2.4e-33 146.4 198 46.5
Phvul.003G085500 Phaseolus vulgaris HOM05D007365 ORTHO05D009309 2.4e-33 146.4 196 44.9
Ah.14g087440 Amaranthus hybridus HOM05D007365 ORTHO05D009309 6.9e-33 144.8 191 49.2
Hma1.2p1_0657F.1_g196860 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 2.0e-32 143.3 96 74.0
Lsat_1_v5_gn_1_129921 Lactuca sativa HOM05D007365 ORTHO05D009309 3.4e-32 142.5 192 47.9
CDE02G4560 Ceratophyllum demersum HOM05D007365 ORTHO05D009309 9.9e-32 141.0 184 46.2
HPP92_007730 Vanilla planifolia HOM05D007365 ORTHO05D009309 9.3e-30 134.4 168 44.0
BraA01t02028Z Brassica rapa HOM05D007365 ORTHO05D009309 3.5e-29 132.5 96 63.5
Zm00001eb280810 Zea mays HOM05D007365 ORTHO05D009309 8.7e-28 127.9 102 62.7
Glyma.07G267200 Glycine max HOM05D007365 ORTHO05D009309 1.9e-27 126.7 95 67.4
Peaxi162Scf00008g00111 Petunia axillaris HOM05D007365 ORTHO05D009309 3.3e-27 125.9 80 80.0
Zm00001eb380530 Zea mays HOM05D007365 ORTHO05D009309 7.4e-27 124.8 102 60.8
SEGI_39039 Sequoiadendron giganteum HOM05D007365 ORTHO05D009309 2.6e-24 116.3 118 47.5
BcaNung00199 Brassica carinata HOM05D007365 ORTHO05D009309 1.0e-23 114.4 83 67.5
Aa31LG2G12470 Aethionema arabicum HOM05D002647 ORTHO05D000003 1.7e-23 113.6 122 51.6
C01p26480 Brassica napus HOM05D002647 ORTHO05D032546 4.9e-23 112.1 100 55.0
Actinidia02294 Actinidia chinensis HOM05D007365 ORTHO05D009309 3.2e-22 109.4 181 43.6
BcaC09g50340 Brassica carinata HOM05D007365 ORTHO05D009309 2.1e-21 106.7 91 57.1
Mapoly0009s0214 Marchantia polymorpha HOM05D007365 ORTHO05D009309 4.6e-21 105.5 85 51.8
Os07g0607200 Oryza sativa ssp. japonica HOM05D007365 ORTHO05D009309 4.6e-21 105.5 75 65.3
Pp3c8_24380 Physcomitrium patens HOM05D007365 ORTHO05D009309 2.5e-19 99.8 121 43.0
CBR_g31098 Chara braunii HOM05D000019 ORTHO05D000048 3.7e-18 95.9 90 53.3
MD10G1337000 Malus domestica HOM05D007365 ORTHO05D009309 1.8e-17 93.6 61 65.6
CsaV3_2G014000 Cucumis sativus L. HOM05D007365 ORTHO05D009309 3.7e-10 69.3 43 69.8
MELO3C035474.2 Cucumis melo HOM05D007365 ORTHO05D009309 1.5e-08 63.9 46 69.6
A01p21190 Brassica napus HOM05D007365 ORTHO05D009309 6.5e-07 58.5 96 36.5


User provided reference genes

Program Settings