Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu057021.1 Olea europaea HOM05D003761 ORTHO05D004412 1.6e-82 309.3 148 100.0
MSTRG.14590 Avicennia marina HOM05D003761 ORTHO05D004412 4.0e-49 198.4 141 66.7
MSTRG.13107 Avicennia marina HOM05D003761 ORTHO05D004412 5.5e-43 177.9 145 57.2
Oeu002779.1 Olea europaea HOM05D003761 ORTHO05D004412 7.2e-43 177.6 147 60.5
Migut.H01629 Erythranthe guttata HOM05D003761 ORTHO05D004412 8.0e-42 174.1 134 61.2
SGA_v2.0_scaffold186G40120 Striga asiatica HOM05D003761 ORTHO05D004412 1.8e-41 172.9 140 60.0
Oeu025960.1 Olea europaea HOM05D003761 ORTHO05D004412 3.0e-41 172.2 139 59.0
Hma1.2p1_1175F.1_g263990 Hydrangea macrophylla HOM05D003761 ORTHO05D004412 1.5e-40 169.9 145 56.6
MSTRG.7132 Avicennia marina HOM05D003761 ORTHO05D004412 3.4e-40 168.7 142 58.5
CAN.G1186.30 Capsicum annuum HOM05D003761 ORTHO05D004412 3.4e-40 168.7 154 54.5
Sopen11g006960 Solanum pennellii HOM05D003761 ORTHO05D004412 3.1e-38 162.2 144 54.9
Lj2C256G8 Lonicera japonica HOM05D003761 ORTHO05D004412 1.6e-37 159.8 144 52.1
PGSC0003DMG400013274 Solanum tuberosum HOM05D003761 ORTHO05D004412 2.7e-37 159.1 137 55.5
SGA_v2.0_scaffold7G03701 Striga asiatica HOM05D003761 ORTHO05D004412 5.9e-37 157.9 137 56.2
Solyc11g012170.1 Solanum lycopersicum HOM05D003761 ORTHO05D004412 7.8e-37 157.5 137 54.7
SalBow8G1906 Salvia bowleyana HOM05D003761 ORTHO05D004412 1.0e-36 157.1 135 56.3
Peaxi162Scf00558g00515 Petunia axillaris HOM05D003761 ORTHO05D004412 1.3e-36 156.8 136 57.4
Lsat_1_v5_gn_1_130120 Lactuca sativa HOM05D003761 ORTHO05D004412 2.3e-36 156.0 145 52.4
Actinidia39257 Actinidia chinensis HOM05D003761 ORTHO05D004412 8.6e-36 154.1 143 56.6
CSS0009294 Camellia sinensis var. sinensis HOM05D003761 ORTHO05D004412 1.1e-35 153.7 143 53.1
CSS0045719 Camellia sinensis var. sinensis HOM05D003761 ORTHO05D004412 1.1e-35 153.7 143 53.1
HanXRQChr01g0003591 Helianthus annuus HOM05D003761 ORTHO05D004412 3.3e-35 152.1 144 51.4
Rhsim13G0141000 Rhododendron simsii HOM05D003761 ORTHO05D004412 4.3e-35 151.8 144 54.2
Nitab4.5_0000143g0280 Nicotiana tabacum HOM05D003761 ORTHO05D004412 9.5e-35 150.6 138 55.8
Cc09_g00350 Coffea canephora HOM05D003761 ORTHO05D004412 1.6e-34 149.8 136 55.9
Oeu025400.1 Olea europaea HOM05D003761 ORTHO05D004412 1.6e-34 149.8 145 51.7
vmacro03612 Vaccinium macrocarpon HOM05D003761 ORTHO05D004412 1.6e-34 149.8 144 54.2
DCAR_030834 Daucus carota HOM05D003761 ORTHO05D004412 2.8e-34 149.1 142 50.0
Migut.M01442 Erythranthe guttata HOM05D003761 ORTHO05D004412 3.6e-34 148.7 143 55.9
Dinv15342 Davidia involucrata HOM05D003761 ORTHO05D004412 4.7e-34 148.3 130 56.9
ECA248G3040 Erigeron canadensis HOM05D003761 ORTHO05D004412 2.3e-33 146.0 145 49.0
Lsat_1_v5_gn_7_13080 Lactuca sativa HOM05D003761 ORTHO05D004412 5.2e-33 144.8 146 51.4
Thecc.06G240300 Theobroma cacao HOM05D003761 ORTHO05D004412 5.2e-33 144.8 136 50.0
SGA_v2.0_scaffold49G18223 Striga asiatica HOM05D003761 ORTHO05D004412 3.4e-32 142.1 132 53.8
GSVIVG01005138001 Vitis vinifera HOM05D003761 ORTHO05D004412 4.4e-32 141.7 130 52.3
Actinidia11903 Actinidia chinensis HOM05D003761 ORTHO05D004412 2.2e-31 139.4 144 50.7
COL.COLO4_31936 Corchorus olitorius HOM05D003761 ORTHO05D004412 2.9e-31 139.0 125 52.0
CiPaw.09G108600 Carya illinoinensis HOM05D003761 ORTHO05D004412 6.4e-31 137.9 144 46.5
PGR042G2523 Punica granatum HOM05D003761 ORTHO05D004412 1.9e-30 136.3 149 45.0
TAR626G0912 Trochodendron aralioides HOM05D003761 ORTHO05D004412 1.9e-30 136.3 143 46.9
Potri.006G005600 Populus trichocarpa HOM05D003761 ORTHO05D004412 3.2e-30 135.6 143 49.0
Duzib192G0597 Durio zibethinus HOM05D003761 ORTHO05D004412 9.2e-30 134.0 138 45.7
Lalb_Chr13g0304361 Lupinus albus HOM05D003761 ORTHO05D004412 1.2e-29 133.7 139 47.5
vmacro03611 Vaccinium macrocarpon HOM05D003761 ORTHO05D004412 1.2e-29 133.7 142 49.3
vmacro23224 Vaccinium macrocarpon HOM05D003761 ORTHO05D004412 1.2e-29 133.7 142 49.3
Cpa.g.sc27.232 Carica papaya HOM05D003761 ORTHO05D004412 1.6e-29 133.3 131 47.3
Glyma.17G005900 Glycine max HOM05D003761 ORTHO05D004412 1.6e-29 133.3 140 50.0
QL05p067831 Quercus lobata HOM05D003761 ORTHO05D004412 1.6e-29 133.3 141 47.5
Haze_07014 Corylus avellana HOM05D003761 ORTHO05D004412 2.0e-29 132.9 142 46.5
FAN25G2178 Fragaria x ananassa HOM05D003761 ORTHO05D004412 2.7e-29 132.5 143 46.2
Lj4g0001357 Lotus japonicus HOM05D003761 ORTHO05D004412 2.7e-29 132.5 150 47.3
Cfa000041 Carpinus fangiana HOM05D003761 ORTHO05D004412 3.5e-29 132.1 142 46.5
Gorai.010G248800 Gossypium raimondii HOM05D003761 ORTHO05D004412 3.5e-29 132.1 142 44.4
Nitab4.5_0001198g0070 Nicotiana tabacum HOM05D003761 ORTHO05D004412 3.5e-29 132.1 129 51.9
unitig_52.g17560 Utricularia gibba HOM05D003761 ORTHO05D004412 3.5e-29 132.1 160 43.1
AUR62012843 Chenopodium quinoa HOM05D003761 ORTHO05D004412 4.6e-29 131.7 143 49.7
Ciclev10016770m.g Citrus clementina HOM05D003761 ORTHO05D004412 4.6e-29 131.7 142 45.8
Gohir.A06G204100 Gossypium hirsutum HOM05D003761 ORTHO05D004412 4.6e-29 131.7 143 44.1
Atru.chr1.2273 Acer truncatum HOM05D003761 ORTHO05D004412 1.0e-28 130.6 141 43.3
Psat4g002880 Pisum sativum HOM05D003761 ORTHO05D004412 1.0e-28 130.6 135 53.3
Sc24g0000400 Simmondsia chinensis HOM05D003761 ORTHO05D004412 1.3e-28 130.2 136 48.5
Manes.09G083000 Manihot esculenta HOM05D003761 ORTHO05D004412 1.7e-28 129.8 137 48.9
AUR62021816 Chenopodium quinoa HOM05D003761 ORTHO05D004412 2.3e-28 129.4 142 48.6
FvH4_3g00370 Fragaria vesca HOM05D003761 ORTHO05D004412 2.3e-28 129.4 141 44.7
Gohir.D06G217400 Gossypium hirsutum HOM05D003761 ORTHO05D004412 3.0e-28 129.0 137 44.5
CANSAT56G1869 Cannabis sativa HOM05D003761 ORTHO05D004412 3.9e-28 128.6 136 44.9
FAN21G2431 Fragaria x ananassa HOM05D003761 ORTHO05D004412 5.0e-28 128.3 143 44.1
Sabra06G0004500 Salix brachista HOM05D003761 ORTHO05D004412 5.0e-28 128.3 140 47.1
MD10G1338600 Malus domestica HOM05D003761 ORTHO05D004412 6.6e-28 127.9 160 45.0
HanXRQChr15g0470241 Helianthus annuus HOM05D003761 ORTHO05D004412 1.1e-27 127.1 128 53.1
MD05G1360900 Malus domestica HOM05D003761 ORTHO05D004412 1.9e-27 126.3 158 42.4
Ca_20995_v3 Cicer arietinum L. HOM05D003761 ORTHO05D004412 2.5e-27 125.9 154 46.8
Lalb_Chr15g0088211 Lupinus albus HOM05D003761 ORTHO05D004412 3.3e-27 125.6 147 45.6
Nn1g07502 Nelumbo nucifera HOM05D003761 ORTHO05D004412 3.3e-27 125.6 147 45.6
Potri.016G006200 Populus trichocarpa HOM05D003761 ORTHO05D004412 4.3e-27 125.2 145 44.8
Prupe.4G004300 Prunus persica HOM05D003761 ORTHO05D004412 7.3e-27 124.4 143 45.5
Aqoxy4G01086 Aquilegia oxysepala HOM05D003761 ORTHO05D004412 9.5e-27 124.0 142 45.1
EL10Ac8g20260 Beta vulgaris HOM05D003761 ORTHO05D004412 1.2e-26 123.6 146 45.2
Actinidia02285 Actinidia chinensis HOM05D000829 ORTHO05D000690 2.8e-26 122.5 146 47.3
Eucgr.L00155 Eucalyptus grandis HOM05D003761 ORTHO05D004412 3.6e-26 122.1 148 39.2
Eucgr.L00154 Eucalyptus grandis HOM05D003761 ORTHO05D004412 4.7e-26 121.7 148 40.5
Hma1.2p1_1175F.1_g263980 Hydrangea macrophylla HOM05D003761 ORTHO05D004412 4.7e-26 121.7 90 61.1
MBI18_g42884_MAGBIO Magnolia biondii HOM05D003761 ORTHO05D004412 4.7e-26 121.7 144 43.8
Eucgr.E03855 Eucalyptus grandis HOM05D003761 ORTHO05D004412 6.2e-26 121.3 133 45.9
Phvul.003G086700 Phaseolus vulgaris HOM05D003761 ORTHO05D004412 6.2e-26 121.3 145 43.4
Sabra16G0011000 Salix brachista HOM05D003761 ORTHO05D004412 8.0e-26 120.9 144 45.1
THA.LOC104806736 Tarenaya hassleriana HOM05D003761 ORTHO05D004412 8.0e-26 120.9 129 44.2
VMungo1215G0779 Vigna mungo HOM05D003761 ORTHO05D004412 3.1e-25 119.0 146 42.5
MBI19_g14888_MAGBIO Magnolia biondii HOM05D003761 ORTHO05D004412 4.0e-25 118.6 134 44.0
BcaC04g21612 Brassica carinata HOM05D003761 ORTHO05D004412 8.9e-25 117.5 133 45.1
C09p29870 Brassica napus HOM05D003761 ORTHO05D004412 8.9e-25 117.5 133 45.1
BcaB07g30768 Brassica carinata HOM05D003761 ORTHO05D004412 1.2e-24 117.1 132 45.5
PGR004G2813 Punica granatum HOM05D003761 ORTHO05D004412 2.0e-24 116.3 147 42.2
Carub.0004s2229 Capsella rubella HOM05D003761 ORTHO05D004412 2.6e-24 115.9 135 46.7
arahy.Tifrunner.gnm1.ann1.YY2BB8 Arachis hypogaea HOM05D003761 ORTHO05D004412 3.4e-24 115.5 147 44.2
A09p23140 Brassica napus HOM05D003761 ORTHO05D004412 3.4e-24 115.5 133 45.9
BraA09t37917Z Brassica rapa HOM05D003761 ORTHO05D004412 3.4e-24 115.5 133 45.9
MBI18_g27019_MAGBIO Magnolia biondii HOM05D003761 ORTHO05D004412 3.4e-24 115.5 125 45.6
TPR.G5987 Trifolium pratense HOM05D003761 ORTHO05D004412 3.4e-24 115.5 135 48.1
AT5G47635 Arabidopsis thaliana HOM05D003761 ORTHO05D004412 4.4e-24 115.2 133 43.6
BcaB02g09050 Brassica carinata HOM05D003761 ORTHO05D004412 4.4e-24 115.2 135 45.9
BolC4t22355H Brassica oleracea HOM05D003761 ORTHO05D004412 4.4e-24 115.2 135 45.9
Medtr4g133932 Medicago truncatula HOM05D003761 ORTHO05D004412 4.4e-24 115.2 138 48.6
AL8G10320 Arabidopsis lyrata HOM05D003761 ORTHO05D004412 7.5e-24 114.4 133 42.9
BcaC06g31357 Brassica carinata HOM05D003761 ORTHO05D004412 7.5e-24 114.4 130 44.6
PSO541G3650 Papaver somniferum HOM05D003761 ORTHO05D004412 9.8e-24 114.0 143 42.7
PGSC0003DMG400013298 Solanum tuberosum HOM05D003761 ORTHO05D004412 9.8e-24 114.0 142 45.8
arahy.Tifrunner.gnm1.ann1.UZ71G8 Arachis hypogaea HOM05D003761 ORTHO05D004412 1.3e-23 113.6 146 44.5
A05p06360 Brassica napus HOM05D003761 ORTHO05D004412 1.3e-23 113.6 135 45.2
BraA05t19604Z Brassica rapa HOM05D003761 ORTHO05D004412 1.3e-23 113.6 135 45.2
Carub.0008s0015 Capsella rubella HOM05D003761 ORTHO05D004412 1.3e-23 113.6 130 44.6
Thhalv10017342m.g Eutrema salsugineum HOM05D003761 ORTHO05D004412 1.7e-23 113.2 132 44.7
Sopen11g007440 Solanum pennellii HOM05D003761 ORTHO05D004412 1.7e-23 113.2 141 42.6
Solyc11g012705.2 Solanum lycopersicum HOM05D003761 ORTHO05D004412 2.2e-23 112.8 141 44.0
AL4G37770 Arabidopsis lyrata HOM05D003761 ORTHO05D004412 3.7e-23 112.1 132 45.5
Sp2g12340 Schrenkiella parvula HOM05D003761 ORTHO05D004412 3.7e-23 112.1 133 42.1
HPP92_024936 Vanilla planifolia HOM05D003761 ORTHO05D004412 4.9e-23 111.7 129 42.6
BcaB02g09051 Brassica carinata HOM05D003761 ORTHO05D004412 6.4e-23 111.3 135 45.2
BcaB06g29129 Brassica carinata HOM05D003761 ORTHO05D004412 6.4e-23 111.3 132 45.5
A06p44900 Brassica napus HOM05D003761 ORTHO05D004412 6.4e-23 111.3 134 42.5
BraA06t27361Z Brassica rapa HOM05D003761 ORTHO05D004412 6.4e-23 111.3 134 42.5
CDE10G1059 Ceratophyllum demersum HOM05D003761 ORTHO05D004412 6.4e-23 111.3 132 44.7
Thhalv10001056m.g Eutrema salsugineum HOM05D003761 ORTHO05D004412 8.3e-23 110.9 134 42.5
HPP92_024932 Vanilla planifolia HOM05D003761 ORTHO05D004412 1.1e-22 110.5 129 41.9
Aa31LG9G5380 Aethionema arabicum HOM05D003761 ORTHO05D004412 1.4e-22 110.2 138 42.8
BolC4t28284H Brassica oleracea HOM05D003761 ORTHO05D004412 1.4e-22 110.2 132 44.7
CAN.G1156.14 Capsicum annuum HOM05D003761 ORTHO05D004412 1.4e-22 110.2 145 43.4
Lj6g0023004 Lotus japonicus HOM05D003761 ORTHO05D004412 1.4e-22 110.2 137 45.3
PSO675G1588 Papaver somniferum HOM05D003761 ORTHO05D004412 1.4e-22 110.2 140 41.4
CARHR223820 Cardamine hirsuta HOM05D003761 ORTHO05D004412 1.9e-22 109.8 141 39.0
Peaxi162Scf00442g00073 Petunia axillaris HOM05D003761 ORTHO05D004412 1.9e-22 109.8 135 48.9
CsaV3_1G015780 Cucumis sativus L. HOM05D003761 ORTHO05D004412 2.4e-22 109.4 147 38.8
CsaV3_UNG065500 Cucumis sativus L. HOM05D003761 ORTHO05D004412 2.4e-22 109.4 147 38.8
Sp4g22430 Schrenkiella parvula HOM05D003761 ORTHO05D004412 2.4e-22 109.4 132 44.7
BolC7t43669H Brassica oleracea HOM05D003761 ORTHO05D004412 3.2e-22 109.0 132 43.2
CARHR173680 Cardamine hirsuta HOM05D003761 ORTHO05D004412 3.2e-22 109.0 130 42.3
Sed0021615 Sechium edule HOM05D003761 ORTHO05D004412 3.2e-22 109.0 147 37.4
CARHR135090 Cardamine hirsuta HOM05D003761 ORTHO05D004412 4.1e-22 108.6 135 43.7
ClCG01G010750 Citrullus lanatus HOM05D003761 ORTHO05D004412 4.1e-22 108.6 147 40.1
Ah.09g233900 Amaranthus hybridus HOM05D003761 ORTHO05D004412 5.4e-22 108.2 136 46.3
BcaC02g07354 Brassica carinata HOM05D003761 ORTHO05D004412 5.4e-22 108.2 132 43.9
TWI38G2030 Tripterygium wilfordii HOM05D003761 ORTHO05D004412 5.4e-22 108.2 141 41.8
C07p31280 Brassica napus HOM05D003761 ORTHO05D004412 7.0e-22 107.8 139 42.4
AT2G40113 Arabidopsis thaliana HOM05D003761 ORTHO05D004412 1.6e-21 106.7 132 43.9
BraA04t18501Z Brassica rapa HOM05D003761 ORTHO05D004412 1.6e-21 106.7 132 43.2
MELO3C025526.2 Cucumis melo HOM05D003761 ORTHO05D004412 1.6e-21 106.7 128 41.4
A04p30050 Brassica napus HOM05D003761 ORTHO05D004412 2.1e-21 106.3 132 43.2
Aa31LG2G12410 Aethionema arabicum HOM05D003761 ORTHO05D004412 1.7e-20 103.2 119 44.5
Aa31LG5G19480 Aethionema arabicum HOM05D003761 ORTHO05D004412 1.7e-20 103.2 130 40.0
BcaC09g50449 Brassica carinata HOM05D003761 ORTHO05D004412 2.3e-20 102.8 134 41.8
C01p25300 Brassica napus HOM05D003761 ORTHO05D004412 2.3e-20 102.8 134 41.8
BolC1t02480H Brassica oleracea HOM05D003761 ORTHO05D004412 2.3e-20 102.8 134 41.8
Sed0014180 Sechium edule HOM05D003761 ORTHO05D004412 2.3e-20 102.8 147 37.4
Thhalv10026465m.g Eutrema salsugineum HOM05D003761 ORTHO05D004412 3.9e-20 102.1 129 39.5
BcaNung03472 Brassica carinata HOM05D003761 ORTHO05D004412 8.6e-20 100.9 129 40.3
BraA01t01941Z Brassica rapa HOM05D003761 ORTHO05D004412 8.6e-20 100.9 141 39.7
Carub.0007s2420 Capsella rubella HOM05D003761 ORTHO05D004412 1.1e-19 100.5 141 36.9
AT4G17215 Arabidopsis thaliana HOM05D003761 ORTHO05D004412 2.5e-19 99.4 137 36.5
Sp7g16980 Schrenkiella parvula HOM05D003761 ORTHO05D004412 4.3e-19 98.6 129 38.8
THA.LOC104798379 Tarenaya hassleriana HOM05D003761 ORTHO05D004412 4.3e-19 98.6 127 42.5
BcaC06g33549 Brassica carinata HOM05D003761 ORTHO05D004412 5.6e-19 98.2 129 39.5
A03p50350 Brassica napus HOM05D003761 ORTHO05D004412 5.6e-19 98.2 129 39.5
C07p48660 Brassica napus HOM05D003761 ORTHO05D004412 5.6e-19 98.2 129 39.5
BolC7t45373H Brassica oleracea HOM05D003761 ORTHO05D004412 5.6e-19 98.2 129 39.5
BraA03t14124Z Brassica rapa HOM05D003761 ORTHO05D004412 5.6e-19 98.2 129 39.5
AL7G37500 Arabidopsis lyrata HOM05D003761 ORTHO05D004412 7.3e-19 97.8 137 35.8
BcaC06g34236 Brassica carinata HOM05D003761 ORTHO05D004412 1.2e-18 97.1 129 41.1
TWI38G1412 Tripterygium wilfordii HOM05D003761 ORTHO05D004412 2.1e-18 96.3 145 38.6
Os10g0208600 Oryza sativa ssp. japonica HOM05D003761 ORTHO05D004412 3.6e-18 95.5 139 41.0
BcaNung03474 Brassica carinata HOM05D003761 ORTHO05D004412 1.8e-17 93.2 129 38.0
BcaNung00112 Brassica carinata HOM05D003761 ORTHO05D004412 1.2e-16 90.5 119 38.7
Sc05g0009870 Simmondsia chinensis HOM05D003761 ORTHO05D004412 2.0e-16 89.7 94 48.9
Cpa.g.sc27.234 Carica papaya HOM05D003761 ORTHO05D004412 5.8e-16 88.2 90 43.3
BolC9t55850H Brassica oleracea HOM05D003761 ORTHO05D004412 1.3e-15 87.0 94 45.7
ATR0827G170 Amborella trichopoda HOM05D003761 ORTHO05D004412 1.4e-14 83.6 119 37.0
Os10g0206500 Oryza sativa ssp. japonica HOM05D003761 ORTHO05D004412 1.6e-13 80.1 131 39.7
C04p67800 Brassica napus HOM05D003761 ORTHO05D004412 5.1e-12 75.1 77 48.1
Zm00001eb050510 Zea mays HOM05D003761 ORTHO05D004412 3.3e-11 72.4 138 35.5


User provided reference genes

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