Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu057008.1 Olea europaea HOM05D006552 ORTHO05D008023 1.1e-178 629.8 307 100.0
Oeu022389.1 Olea europaea HOM05D006552 ORTHO05D008023 1.1e-114 417.2 312 72.8
Migut.M01459 Erythranthe guttata HOM05D006552 ORTHO05D008023 7.6e-95 351.3 334 60.5
Sabra06G0002900 Salix brachista HOM05D006552 ORTHO05D008023 1.5e-87 327.0 342 56.1
SalBow8G5435 Salvia bowleyana HOM05D006552 ORTHO05D008023 1.7e-86 323.6 346 55.5
TAR627G1046 Trochodendron aralioides HOM05D006552 ORTHO05D008023 2.2e-86 323.2 346 55.2
CiPaw.09G110600 Carya illinoinensis HOM05D006552 ORTHO05D008023 8.4e-86 321.2 325 57.5
Dinv04390 Davidia involucrata HOM05D006552 ORTHO05D008023 1.1e-85 320.9 342 56.4
Potri.006G003100 Populus trichocarpa HOM05D006552 ORTHO05D008023 1.1e-85 320.9 356 54.5
Cpa.g.sc27.207 Carica papaya HOM05D006552 ORTHO05D008023 3.2e-85 319.3 348 53.4
CSS0027101 Camellia sinensis var. sinensis HOM05D006552 ORTHO05D008023 4.2e-85 318.9 346 56.6
CSS0045827 Camellia sinensis var. sinensis HOM05D006552 ORTHO05D008023 4.2e-85 318.9 346 56.6
CANSAT56G3604 Cannabis sativa HOM05D006552 ORTHO05D008023 7.1e-85 318.2 337 55.8
SalBow8G4188 Salvia bowleyana HOM05D006552 ORTHO05D008023 9.3e-85 317.8 317 57.1
TAR629G0917 Trochodendron aralioides HOM05D006552 ORTHO05D008023 9.3e-85 317.8 343 55.7
Ca_00774_v3 Cicer arietinum L. HOM05D006552 ORTHO05D008023 1.6e-84 317.0 341 54.5
Nitab4.5_0010199g0040 Nicotiana tabacum HOM05D006552 ORTHO05D008023 1.6e-84 317.0 345 55.4
Nitab4.5_0000147g0210 Nicotiana tabacum HOM05D006552 ORTHO05D008023 2.1e-84 316.6 345 54.8
Cc09_g00200 Coffea canephora HOM05D006552 ORTHO05D008023 3.5e-84 315.8 345 56.8
Glyma.15G121600 Glycine max HOM05D006552 ORTHO05D008023 6.0e-84 315.1 343 55.1
Haze_07043 Corylus avellana HOM05D006552 ORTHO05D008023 7.9e-84 314.7 320 57.2
Nn1g07572 Nelumbo nucifera HOM05D006552 ORTHO05D008023 1.0e-83 314.3 345 54.2
Potri.016G003800 Populus trichocarpa HOM05D006552 ORTHO05D008023 1.0e-83 314.3 342 55.3
Cfa000018 Carpinus fangiana HOM05D006552 ORTHO05D008023 3.9e-83 312.4 320 56.6
MBI15_g38532_MAGBIO Magnolia biondii HOM05D006552 ORTHO05D008023 3.9e-83 312.4 324 58.0
Psat1g173280 Pisum sativum HOM05D006552 ORTHO05D008023 6.7e-83 311.6 344 54.4
Glyma.09G015800 Glycine max HOM05D006552 ORTHO05D008023 1.1e-82 310.8 343 55.7
Peaxi162Scf00811g00441 Petunia axillaris HOM05D006552 ORTHO05D008023 1.9e-82 310.1 345 54.2
Lj6g0006082 Lotus japonicus HOM05D006552 ORTHO05D008023 3.3e-82 309.3 346 53.8
Manes.09G084700 Manihot esculenta HOM05D006552 ORTHO05D008023 3.3e-82 309.3 342 54.7
AUR62043507 Chenopodium quinoa HOM05D006552 ORTHO05D008023 5.6e-82 308.5 332 54.8
Phvul.006G136100 Phaseolus vulgaris HOM05D006552 ORTHO05D008023 7.4e-82 308.1 333 55.6
Solyc04g015170.3 Solanum lycopersicum HOM05D006552 ORTHO05D008023 7.4e-82 308.1 345 54.8
Medtr2g027390 Medicago truncatula HOM05D006552 ORTHO05D008023 9.6e-82 307.8 347 53.3
vmacro03594 Vaccinium macrocarpon HOM05D006552 ORTHO05D008023 9.6e-82 307.8 348 54.3
CDE10G0757 Ceratophyllum demersum HOM05D006552 ORTHO05D008023 1.6e-81 307.0 327 56.3
DCAR_002248 Daucus carota HOM05D006552 ORTHO05D008023 1.6e-81 307.0 347 54.2
VMungo0540G0040 Vigna mungo HOM05D006552 ORTHO05D008023 1.6e-81 307.0 345 53.9
CAN.G1456.4 Capsicum annuum HOM05D006552 ORTHO05D008023 2.8e-81 306.2 345 54.5
Sopen04g007210 Solanum pennellii HOM05D006552 ORTHO05D008023 2.8e-81 306.2 345 54.5
PGSC0003DMG400019743 Solanum tuberosum HOM05D006552 ORTHO05D008023 3.7e-81 305.8 345 54.5
Ciclev10015322m.g Citrus clementina HOM05D006552 ORTHO05D008023 8.1e-81 304.7 341 52.8
CsaV3_1G015300 Cucumis sativus L. HOM05D006552 ORTHO05D008023 1.1e-80 304.3 342 52.9
Lalb_Chr15g0088331 Lupinus albus HOM05D006552 ORTHO05D008023 1.1e-80 304.3 356 53.9
Hma1.2p1_0048F.1_g028110 Hydrangea macrophylla HOM05D006552 ORTHO05D008023 1.4e-80 303.9 271 63.8
MD10G1340400 Malus domestica HOM05D006552 ORTHO05D008023 1.4e-80 303.9 337 53.7
Eucgr.E03832 Eucalyptus grandis HOM05D006552 ORTHO05D008023 1.8e-80 303.5 344 54.7
Sabra16G0008800 Salix brachista HOM05D006552 ORTHO05D008023 1.8e-80 303.5 342 52.9
QL05p066675 Quercus lobata HOM05D006552 ORTHO05D008023 2.4e-80 303.1 345 52.8
EL10Ac8g20280 Beta vulgaris HOM05D006552 ORTHO05D008023 3.1e-80 302.8 339 53.7
Duzib235G0521 Durio zibethinus HOM05D006552 ORTHO05D008023 6.9e-80 301.6 323 54.5
Prupe.4G002500 Prunus persica HOM05D006552 ORTHO05D008023 9.0e-80 301.2 332 54.5
Atru.chr1.2171 Acer truncatum HOM05D006552 ORTHO05D008023 1.2e-79 300.8 310 56.1
Duzib192G0073 Durio zibethinus HOM05D006552 ORTHO05D008023 1.2e-79 300.8 323 55.7
arahy.Tifrunner.gnm1.ann1.UF9Q9U Arachis hypogaea HOM05D006552 ORTHO05D008023 1.5e-79 300.4 351 52.7
ClCG01G011480 Citrullus lanatus HOM05D006552 ORTHO05D008023 1.5e-79 300.4 342 52.3
MELO3C021670.2 Cucumis melo HOM05D006552 ORTHO05D008023 1.5e-79 300.4 342 52.3
Sc17g0008030 Simmondsia chinensis HOM05D006552 ORTHO05D008023 2.0e-79 300.1 344 54.7
Ah.12g051860 Amaranthus hybridus HOM05D006552 ORTHO05D008023 2.6e-79 299.7 332 53.6
arahy.Tifrunner.gnm1.ann1.25NBW7 Arachis hypogaea HOM05D006552 ORTHO05D008023 2.6e-79 299.7 353 52.4
SGA_v2.0_scaffold7G03676 Striga asiatica HOM05D006552 ORTHO05D008023 2.6e-79 299.7 337 53.4
THA.LOC104806746 Tarenaya hassleriana HOM05D006552 ORTHO05D008023 3.4e-79 299.3 316 55.1
Lsat_1_v5_gn_7_12841 Lactuca sativa HOM05D006552 ORTHO05D008023 7.6e-79 298.1 336 56.5
PSO210G1853 Papaver somniferum HOM05D006552 ORTHO05D008023 2.2e-78 296.6 335 52.8
PSO210G5261 Papaver somniferum HOM05D006552 ORTHO05D008023 2.9e-78 296.2 335 52.8
Rhsim13G0138800 Rhododendron simsii HOM05D006552 ORTHO05D008023 4.9e-78 295.4 348 52.0
RcHm_v2.0_Chr5g0000281 Rosa chinensis HOM05D006552 ORTHO05D008023 8.4e-78 294.7 315 54.0
Zm00001eb049800 Zea mays HOM05D006552 ORTHO05D008023 3.2e-77 292.7 342 50.6
TWI38G0911 Tripterygium wilfordii HOM05D006552 ORTHO05D008023 4.2e-77 292.4 339 53.1
Sed0011361 Sechium edule HOM05D006552 ORTHO05D008023 1.6e-76 290.4 344 52.0
COL.COLO4_31951 Corchorus olitorius HOM05D002176 ORTHO05D002598 2.1e-76 290.0 319 54.5
Haze_09863 Corylus avellana HOM05D006552 ORTHO05D008023 4.6e-76 288.9 337 51.9
Gohir.D06G218700 Gossypium hirsutum HOM05D006552 ORTHO05D008023 4.6e-76 288.9 324 54.0
MD05G1362800 Malus domestica HOM05D006552 ORTHO05D008023 6.0e-76 288.5 338 52.7
Gohir.A06G203000 Gossypium hirsutum HOM05D006552 ORTHO05D008023 1.3e-75 287.3 324 53.7
Zm00001eb219360 Zea mays HOM05D006552 ORTHO05D008023 1.3e-75 287.3 342 51.2
Os08g0326100 Oryza sativa ssp. japonica HOM05D006552 ORTHO05D008023 1.8e-75 287.0 345 49.0
Gorai.010G247600 Gossypium raimondii HOM05D006552 ORTHO05D008023 3.9e-75 285.8 330 53.0
ATR0751G220 Amborella trichopoda HOM05D006552 ORTHO05D008023 8.7e-75 284.6 330 52.4
Thecc.06G242500 Theobroma cacao HOM05D006552 ORTHO05D008023 8.7e-75 284.6 323 52.6
Hund21124 Selenicereus undatus HOM05D006552 ORTHO05D008023 1.1e-74 284.3 342 51.8
Actinidia12830 Actinidia chinensis HOM05D006552 ORTHO05D008023 5.7e-74 282.0 257 64.2
Lj2A255T60 Lonicera japonica HOM05D006552 ORTHO05D008023 1.6e-73 280.4 346 52.9
FvH4_3g00210 Fragaria vesca HOM05D006552 ORTHO05D008023 4.1e-72 275.8 313 52.7
PGR004G2161 Punica granatum HOM05D006552 ORTHO05D008023 1.2e-71 274.2 349 50.7
Dinv07143 Davidia involucrata HOM05D006552 ORTHO05D008023 2.6e-71 273.1 319 53.9
Thhalv10000925m.g Eutrema salsugineum HOM05D006552 ORTHO05D008023 6.5e-70 268.5 305 52.5
A06p44780 Brassica napus HOM05D006552 ORTHO05D008023 3.2e-69 266.2 301 52.5
Aa31sc219G30 Aethionema arabicum HOM05D006552 ORTHO05D008023 7.2e-69 265.0 311 51.4
Cfa021888 Carpinus fangiana HOM05D006552 ORTHO05D008023 9.3e-69 264.6 343 49.3
BraA06t27351Z Brassica rapa HOM05D006552 ORTHO05D008023 1.2e-68 264.2 301 52.2
SEGI_31055 Sequoiadendron giganteum HOM05D006552 ORTHO05D008023 1.6e-68 263.8 344 48.8
TPR.G10495 Trifolium pratense HOM05D006552 ORTHO05D008023 2.7e-68 263.1 245 60.8
Actinidia26617 Actinidia chinensis HOM05D006552 ORTHO05D008023 1.0e-67 261.2 308 52.3
BolC7t43685H Brassica oleracea HOM05D006552 ORTHO05D008023 1.3e-67 260.8 302 51.7
Carub.0008s0068 Capsella rubella HOM05D006552 ORTHO05D008023 1.3e-67 260.8 308 51.0
C07p31420 Brassica napus HOM05D006552 ORTHO05D008023 1.8e-67 260.4 302 51.7
FAN25G2008 Fragaria x ananassa HOM05D006552 ORTHO05D008023 2.3e-67 260.0 311 51.8
AUR62022328 Chenopodium quinoa HOM05D006552 ORTHO05D008023 5.1e-67 258.8 313 52.1
BcaNung06819 Brassica carinata HOM05D006552 ORTHO05D008023 6.7e-67 258.5 303 51.8
CARHR216590 Cardamine hirsuta HOM05D006552 ORTHO05D008023 3.3e-66 256.1 301 50.2
HPP92_020486 Vanilla planifolia HOM05D006552 ORTHO05D008023 8.2e-65 251.5 320 48.4
HanXRQChr05g0129001 Helianthus annuus HOM05D006552 ORTHO05D008023 5.3e-64 248.8 324 50.3
AL8G11090 Arabidopsis lyrata HOM05D006552 ORTHO05D008023 4.5e-63 245.7 313 49.8
AT5G47790 Arabidopsis thaliana HOM05D006552 ORTHO05D008023 5.9e-63 245.4 310 49.0
SHI24428 Sapria himalayana HOM05D002730 ORTHO05D008023 9.4e-61 238.0 444 38.1
unitig_62.g23502 Utricularia gibba HOM05D006552 ORTHO05D008023 2.0e-55 220.3 335 43.6
Mapoly0092s0040 Marchantia polymorpha HOM05D006552 ORTHO05D008023 2.5e-53 213.4 333 43.2
ECA150G0011 Erigeron canadensis HOM05D006552 ORTHO05D008023 6.7e-51 205.3 308 43.5
CDE10G1001 Ceratophyllum demersum HOM05D006552 ORTHO05D008023 4.4e-50 202.6 227 51.1
Pp3c12_14900 Physcomitrium patens HOM05D006552 ORTHO05D008023 1.3e-49 201.1 323 42.4
GSVIVG01003475001 Vitis vinifera HOM05D006552 ORTHO05D008023 6.3e-49 198.7 222 53.6
AagrBONN_evm.TU.Sc2ySwM_228.2576 Anthoceros agrestis HOM05D006552 ORTHO05D008023 1.2e-44 184.5 308 39.9
CBR_g31530 Chara braunii HOM05D006552 ORTHO05D008023 4.7e-44 182.6 275 43.6
Nn1g07745 Nelumbo nucifera HOM05D006552 ORTHO05D008023 2.4e-40 170.2 161 64.6
Actinidia02279 Actinidia chinensis HOM05D006552 ORTHO05D008023 1.0e-38 164.9 157 56.1
Aqoxy1G04286 Aquilegia oxysepala HOM05D006552 ORTHO05D008023 1.5e-34 151.0 162 58.0
CARHR173540 Cardamine hirsuta HOM05D006552 ORTHO05D008023 1.6e-20 104.4 127 50.4
Atru.chr1.2175 Acer truncatum HOM05D006552 ORTHO05D008023 1.0e-19 101.7 62 79.0
Atru.chr2.1684 Acer truncatum HOM05D006552 ORTHO05D008023 8.9e-19 98.6 62 77.4
Atru.chr4.798 Acer truncatum HOM05D006552 ORTHO05D008023 8.9e-19 98.6 62 77.4


User provided reference genes

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