Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu056908.1 Olea europaea HOM05D005512 ORTHO05D006716 4.1e-254 880.9 458 100.0
Dinv21230 Davidia involucrata HOM05D005512 ORTHO05D006716 1.2e-59 235.0 426 39.4
MSTRG.10360 Avicennia marina HOM05D005512 ORTHO05D006716 1.9e-57 227.6 373 39.1
Dinv31662 Davidia involucrata HOM05D005512 ORTHO05D006716 4.7e-56 223.0 373 39.4
Prupe.7G114400 Prunus persica HOM05D005512 ORTHO05D006716 2.9e-50 203.8 425 37.9
RcHm_v2.0_Chr3g0472661 Rosa chinensis HOM05D005512 ORTHO05D006716 5.5e-49 199.5 382 38.0
MD12G1022300 Malus domestica HOM05D005512 ORTHO05D006716 4.5e-43 179.9 450 36.0
FAN09G0635 Fragaria x ananassa HOM05D005512 ORTHO05D006716 5.9e-43 179.5 389 36.2
QL07p039701 Quercus lobata HOM05D005512 ORTHO05D006716 5.9e-43 179.5 432 34.0
FAN02G2015 Fragaria x ananassa HOM05D005512 ORTHO05D006716 1.7e-42 177.9 390 36.7
FAN05G0202 Fragaria x ananassa HOM05D005512 ORTHO05D006716 6.5e-42 176.0 390 36.4
CiPaw.10G007200 Carya illinoinensis HOM05D005512 ORTHO05D006716 2.5e-41 174.1 428 34.3
FvH4_6g18250 Fragaria vesca HOM05D005512 ORTHO05D006716 2.5e-41 174.1 389 36.2
FAN14G2179 Fragaria x ananassa HOM05D005512 ORTHO05D006716 2.5e-41 174.1 389 36.2
MD14G1019200 Malus domestica HOM05D005512 ORTHO05D006716 2.5e-41 174.1 424 35.4
Potri.006G114600 Populus trichocarpa HOM05D005512 ORTHO05D006716 6.1e-40 169.5 457 32.6
CiPaw.09G010900 Carya illinoinensis HOM05D005512 ORTHO05D006716 1.8e-39 167.9 386 34.5
Lj1g0021236 Lotus japonicus HOM05D005512 ORTHO05D006716 2.3e-39 167.5 393 36.6
Ciclev10013541m.g Citrus clementina HOM05D005512 ORTHO05D006716 4.0e-39 166.8 493 33.3
FAN05G5667 Fragaria x ananassa HOM05D005512 ORTHO05D006716 2.0e-38 164.5 421 34.0
Glyma.19G193400 Glycine max HOM05D005512 ORTHO05D006716 2.6e-38 164.1 477 32.1
TWI74G0342 Tripterygium wilfordii HOM05D005512 ORTHO05D006716 2.8e-37 160.6 391 33.2
Sabra06G0089500 Salix brachista HOM05D005512 ORTHO05D006716 6.3e-37 159.5 459 31.8
Actinidia10388 Actinidia chinensis HOM05D005512 ORTHO05D006716 4.1e-36 156.8 389 34.4
Cfa016575 Carpinus fangiana HOM05D005512 ORTHO05D006716 7.7e-35 152.5 442 32.8
FAN14G2174 Fragaria x ananassa HOM05D005512 ORTHO05D006716 2.2e-34 151.0 389 34.4
Cpa.g.sc5.51 Carica papaya HOM05D005512 ORTHO05D006716 2.9e-34 150.6 423 32.4
Actinidia08422 Actinidia chinensis HOM05D005512 ORTHO05D006716 1.5e-33 148.3 378 33.1
Thecc.05G085400 Theobroma cacao HOM05D005512 ORTHO05D006716 1.9e-33 147.9 389 34.7
Peaxi162Scf00752g00310 Petunia axillaris HOM05D005512 ORTHO05D006716 7.2e-33 146.0 388 34.0
Peaxi162Scf36127g00005 Petunia axillaris HOM05D005512 ORTHO05D006716 7.2e-33 146.0 388 34.0
VMungo1383G0830 Vigna mungo HOM05D005512 ORTHO05D006716 1.2e-32 145.2 372 34.4
Haze_19571 Corylus avellana HOM05D005512 ORTHO05D006716 1.0e-31 142.1 421 33.3
Manes.09G059527 Manihot esculenta HOM05D005512 ORTHO05D006716 1.8e-31 141.4 381 32.8
Lalb_Chr20g0112081 Lupinus albus HOM05D005512 ORTHO05D006716 3.0e-31 140.6 467 31.0
TWI53G0330 Tripterygium wilfordii HOM05D005512 ORTHO05D006716 3.0e-31 140.6 427 30.9
arahy.Tifrunner.gnm1.ann1.EPRD9B Arachis hypogaea HOM05D005512 ORTHO05D006716 5.2e-31 139.8 502 29.7
Lj3A1000G63 Lonicera japonica HOM05D005512 ORTHO05D006716 5.2e-31 139.8 460 32.2
COL.COLO4_29783 Corchorus olitorius HOM05D005512 ORTHO05D006716 1.2e-30 138.7 392 34.2
Nitab4.5_0005756g0030 Nicotiana tabacum HOM05D005512 ORTHO05D006716 1.5e-30 138.3 444 33.3
Nn6g34983 Nelumbo nucifera HOM05D005512 ORTHO05D006716 2.0e-30 137.9 376 33.5
Phvul.001G188300 Phaseolus vulgaris HOM05D005512 ORTHO05D006716 2.0e-30 137.9 366 34.7
Nitab4.5_0000794g0130 Nicotiana tabacum HOM05D005512 ORTHO05D006716 3.4e-30 137.1 412 31.1
Nitab4.5_0011780g0020 Nicotiana tabacum HOM05D005512 ORTHO05D006716 2.2e-29 134.4 446 31.4
Sopen09g004520 Solanum pennellii HOM05D005512 ORTHO05D006716 3.7e-29 133.7 458 31.9
Lsat_1_v5_gn_2_22561 Lactuca sativa HOM05D005512 ORTHO05D006716 6.3e-29 132.9 275 38.5
Atru.chr8.1592 Acer truncatum HOM05D005512 ORTHO05D006716 1.4e-28 131.7 316 36.4
CANSAT80G2511 Cannabis sativa HOM05D005512 ORTHO05D006716 4.1e-28 130.2 380 33.2
Cc08_g02550 Coffea canephora HOM05D005512 ORTHO05D006716 7.0e-28 129.4 403 32.3
ECA238G0726 Erigeron canadensis HOM05D000284 ORTHO05D001229 9.1e-28 129.0 481 30.4
Hma1.2p1_0084F.1_g043460 Hydrangea macrophylla HOM05D005512 ORTHO05D006716 2.0e-27 127.9 451 31.9
GSVIVG01033811001 Vitis vinifera HOM05D005512 ORTHO05D006716 1.0e-26 125.6 390 30.5
ClCG10G019160 Citrullus lanatus HOM05D005512 ORTHO05D006716 2.9e-26 124.0 388 33.0
Solyc09g009760.1 Solanum lycopersicum HOM05D005512 ORTHO05D006716 2.9e-26 124.0 407 32.7
Duzib128G1345 Durio zibethinus HOM05D005512 ORTHO05D006716 6.6e-26 122.9 391 32.7
HanXRQChr16g0518951 Helianthus annuus HOM05D005512 ORTHO05D006716 6.6e-26 122.9 448 31.9
Sed0026834 Sechium edule HOM05D005512 ORTHO05D006716 1.1e-25 122.1 388 31.4
Gohir.D04G102100 Gossypium hirsutum HOM05D005512 ORTHO05D006716 1.9e-25 121.3 408 32.1
CAN.G397.46 Capsicum annuum HOM05D005512 ORTHO05D006716 4.2e-25 120.2 228 38.6
Gorai.009G405400 Gossypium raimondii HOM05D005512 ORTHO05D006716 9.5e-25 119.0 409 32.0
PGR142G2241 Punica granatum HOM05D005512 ORTHO05D006716 9.5e-25 119.0 409 31.3
Aa31LG7G4150 Aethionema arabicum HOM05D005512 ORTHO05D006716 1.6e-24 118.2 473 29.4
CsaV3_3G037090 Cucumis sativus L. HOM05D005512 ORTHO05D006716 2.1e-24 117.9 391 32.2
AL1G32240 Arabidopsis lyrata HOM05D005512 ORTHO05D006716 3.6e-24 117.1 387 33.6
arahy.Tifrunner.gnm1.ann1.S7MLB0 Arachis hypogaea HOM05D005512 ORTHO05D006716 6.1e-24 116.3 473 28.1
Carub.0001s1906 Capsella rubella HOM05D005512 ORTHO05D006716 6.1e-24 116.3 389 33.7
Sp1g17370 Schrenkiella parvula HOM05D005512 ORTHO05D006716 1.4e-23 115.2 391 32.5
Gohir.A04G064600 Gossypium hirsutum HOM05D005512 ORTHO05D006716 4.0e-23 113.6 396 31.8
Thhalv10009681m.g Eutrema salsugineum HOM05D005512 ORTHO05D006716 5.2e-23 113.2 397 30.7
Lj2A133G43 Lonicera japonica HOM05D005512 ORTHO05D006716 5.2e-23 113.2 479 28.6
CARHR020060 Cardamine hirsuta HOM05D005512 ORTHO05D006716 1.5e-22 111.7 386 32.1
Oeu040522.1 Olea europaea HOM05D005512 ORTHO05D006716 1.5e-22 111.7 464 30.2
AUR62028570 Chenopodium quinoa HOM05D005512 ORTHO05D006716 2.6e-22 110.9 396 29.8
Rhsim03G0078100 Rhododendron simsii HOM05D005512 ORTHO05D006716 3.4e-22 110.5 431 29.7
Duzib093G0027 Durio zibethinus HOM05D005512 ORTHO05D006716 4.4e-22 110.2 396 29.3
AT1G19490 Arabidopsis thaliana HOM05D005512 ORTHO05D006716 5.7e-22 109.8 389 31.9
A06p15670 Brassica napus HOM05D005512 ORTHO05D006716 3.7e-21 107.1 473 30.4
TAR623G0330 Trochodendron aralioides HOM05D005512 ORTHO05D006716 3.7e-21 107.1 231 39.8
BraA06t24676Z Brassica rapa HOM05D005512 ORTHO05D006716 4.9e-21 106.7 484 29.8
Lsat_1_v5_gn_6_66321 Lactuca sativa HOM05D005512 ORTHO05D006716 4.9e-21 106.7 153 45.8
C05p17910 Brassica napus HOM05D005512 ORTHO05D006716 6.3e-21 106.3 424 30.4
MELO3C009455.2 Cucumis melo HOM05D005512 ORTHO05D006716 1.1e-20 105.5 383 31.1
AUR62033525 Chenopodium quinoa HOM05D005512 ORTHO05D006716 4.1e-20 103.6 401 29.7
BcaB03g14441 Brassica carinata HOM05D005512 ORTHO05D006716 7.0e-20 102.8 388 30.9
Medtr7g104190 Medicago truncatula HOM05D005512 ORTHO05D006716 9.2e-20 102.4 462 27.7
MBI17_g31309_MAGBIO Magnolia biondii HOM05D005512 ORTHO05D006716 1.2e-19 102.1 368 31.2
CSS0012282 Camellia sinensis var. sinensis HOM05D005512 ORTHO05D006716 2.7e-19 100.9 397 30.5
THA.LOC104804992 Tarenaya hassleriana HOM05D005512 ORTHO05D006716 3.5e-19 100.5 275 35.6
SalBow3G2059 Salvia bowleyana HOM05D005512 ORTHO05D006716 4.5e-19 100.1 363 29.5
DCAR_009151 Daucus carota HOM05D005512 ORTHO05D006716 5.9e-19 99.8 290 32.1
PSO384G3501 Papaver somniferum HOM05D005512 ORTHO05D006716 1.3e-18 98.6 204 38.7
Aqoxy4G02826 Aquilegia oxysepala HOM05D005512 ORTHO05D006716 2.3e-18 97.8 406 27.3
PSO339G0823 Papaver somniferum HOM05D005512 ORTHO05D006716 6.6e-18 96.3 204 37.7
TPR.G19527 Trifolium pratense HOM05D005512 ORTHO05D006716 6.6e-18 96.3 458 27.3
Sc20g0006160 Simmondsia chinensis HOM05D005512 ORTHO05D006716 3.3e-17 94.0 209 33.5
Glyma.03G193300 Glycine max HOM05D005512 ORTHO05D006716 2.8e-16 90.9 213 38.5
Hund14853 Selenicereus undatus HOM05D005512 ORTHO05D006716 4.7e-16 90.1 213 36.6
Sopen10g032880 Solanum pennellii HOM05D005512 ORTHO05D006716 1.4e-15 88.6 199 38.2
unitig_22.g5122 Utricularia gibba HOM05D005512 ORTHO05D006716 8.9e-15 85.9 202 37.1
Nn2g14077 Nelumbo nucifera HOM05D005512 ORTHO05D006716 5.8e-14 83.2 79 62.0
EL10Ac7g16952 Beta vulgaris HOM05D005512 ORTHO05D006716 1.3e-13 82.0 188 35.6
PGSC0003DMG400028166 Solanum tuberosum HOM05D005512 ORTHO05D006716 1.3e-13 82.0 337 28.2
Solyc10g083380.2 Solanum lycopersicum HOM05D005512 ORTHO05D006716 1.7e-13 81.6 96 51.0
PGSC0003DMG402008883 Solanum tuberosum HOM05D005512 ORTHO05D006716 2.2e-13 81.3 348 28.4
Psat3g034880 Pisum sativum HOM05D005512 ORTHO05D006716 4.9e-13 80.1 457 26.3
CDE06G1506 Ceratophyllum demersum HOM05D000077 ORTHO05D002348 1.1e-12 79.0 88 55.7
Glyma.17G197300 Glycine max HOM05D005512 ORTHO05D006716 1.1e-12 79.0 143 38.5
Glyma.19G084800 Glycine max HOM05D005512 ORTHO05D006716 1.4e-12 78.6 144 39.6
HPP92_009043 Vanilla planifolia HOM05D005512 ORTHO05D006716 1.4e-12 78.6 234 33.3
CDE08G0293 Ceratophyllum demersum HOM05D005512 ORTHO05D006716 7.0e-12 76.3 100 49.0
Zm00001eb197160 Zea mays HOM05D005512 ORTHO05D006716 7.0e-12 76.3 126 42.9
DCAR_020766 Daucus carota HOM05D005512 ORTHO05D006716 9.2e-12 75.9 281 32.4
Os11g0154900 Oryza sativa ssp. japonica HOM05D005512 ORTHO05D006716 9.2e-12 75.9 155 40.0
ATR0820G165 Amborella trichopoda HOM05D005512 ORTHO05D006716 1.0e-10 72.4 336 25.3
Zm00001eb406920 Zea mays HOM05D005512 ORTHO05D006716 1.7e-10 71.6 87 55.2
Eucgr.K02060 Eucalyptus grandis HOM05D005512 ORTHO05D006716 4.3e-09 67.0 320 26.2
Ah.08g210690 Amaranthus hybridus HOM05D005512 ORTHO05D006716 3.1e-07 60.8 327 26.9
Pp3c14_6250 Physcomitrium patens HOM05D005512 ORTHO05D006716 6.8e-07 59.7 118 42.4
Eucgr.K02061 Eucalyptus grandis HOM05D005512 ORTHO05D006716 4.4e-06 57.0 73 54.8
Pp3c17_11650 Physcomitrium patens HOM05D005512 ORTHO05D006716 7.5e-06 56.2 119 40.3


User provided reference genes

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