Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu056857.1 Olea europaea HOM05D004951 ORTHO05D005840 3.5e-106 388.3 194 100.0
Oeu024529.1 Olea europaea HOM05D004951 ORTHO05D005840 7.6e-101 370.5 192 95.8
MSTRG.1208 Avicennia marina HOM05D004951 ORTHO05D005840 9.4e-83 310.5 187 80.2
SalBow8G2430 Salvia bowleyana HOM05D004951 ORTHO05D005840 4.5e-77 291.6 192 75.0
Migut.G00984 Erythranthe guttata HOM05D004951 ORTHO05D005840 7.7e-77 290.8 192 72.9
Migut.C00815 Erythranthe guttata HOM05D004951 ORTHO05D005840 2.2e-76 289.3 192 72.4
SGA_v2.0_scaffold11G05895 Striga asiatica HOM05D004951 ORTHO05D005840 2.2e-76 289.3 192 74.0
Dinv39502 Davidia involucrata HOM05D004951 ORTHO05D005840 2.5e-75 285.8 192 71.9
CSS0031211 Camellia sinensis var. sinensis HOM05D004951 ORTHO05D005840 4.2e-75 285.0 192 74.0
Actinidia15407 Actinidia chinensis HOM05D004951 ORTHO05D005840 3.6e-74 282.0 192 70.8
Hma1.2p1_0638F.1_g193670 Hydrangea macrophylla HOM05D004951 ORTHO05D005840 1.8e-73 279.6 191 71.2
vmacro21713 Vaccinium macrocarpon HOM05D004951 ORTHO05D005840 1.8e-73 279.6 192 71.4
vmacro14381 Vaccinium macrocarpon HOM05D004951 ORTHO05D005840 4.0e-73 278.5 192 70.3
CAN.G103.3 Capsicum annuum HOM05D004951 ORTHO05D005840 5.7e-72 274.6 186 72.6
Cc10_g01890 Coffea canephora HOM05D004951 ORTHO05D005840 2.8e-71 272.3 192 70.3
Sopen05g032630 Solanum pennellii HOM05D004951 ORTHO05D005840 3.7e-71 271.9 186 72.6
Oeu024522.1 Olea europaea HOM05D004951 ORTHO05D005840 4.8e-71 271.6 151 92.7
Solyc05g054140.3 Solanum lycopersicum HOM05D004951 ORTHO05D005840 4.8e-71 271.6 186 72.0
Actinidia37925 Actinidia chinensis HOM05D004951 ORTHO05D005840 6.3e-71 271.2 192 70.3
PGSC0003DMG400008458 Solanum tuberosum HOM05D004951 ORTHO05D005840 1.8e-70 269.6 186 72.6
GSVIVG01009867001 Vitis vinifera HOM05D004951 ORTHO05D005840 7.0e-70 267.7 192 69.8
Nitab4.5_0001242g0070 Nicotiana tabacum HOM05D004951 ORTHO05D005840 5.9e-69 264.6 192 67.2
COL.COLO4_20267 Corchorus olitorius HOM05D004951 ORTHO05D005840 1.3e-68 263.5 192 69.3
QL02p011069 Quercus lobata HOM05D004951 ORTHO05D005840 2.9e-68 262.3 192 66.7
COL.COLO4_26170 Corchorus olitorius HOM05D004951 ORTHO05D005840 3.8e-68 261.9 192 68.2
Glyma.18G246500 Glycine max HOM05D004951 ORTHO05D005840 3.8e-68 261.9 192 67.2
Rhsim06G0023300 Rhododendron simsii HOM05D004951 ORTHO05D005840 3.8e-68 261.9 192 67.7
TAR381G0914 Trochodendron aralioides HOM05D004951 ORTHO05D005840 8.5e-68 260.8 192 67.7
Peaxi162Scf00186g00023 Petunia axillaris HOM05D004951 ORTHO05D005840 2.5e-67 259.2 214 61.7
Atru.chr2.1521 Acer truncatum HOM05D004951 ORTHO05D005840 7.2e-67 257.7 192 66.7
CiPaw.08G064600 Carya illinoinensis HOM05D004951 ORTHO05D005840 9.4e-67 257.3 192 66.7
THA.LOC104809415 Tarenaya hassleriana HOM05D004951 ORTHO05D005840 1.2e-66 256.9 192 64.1
Gohir.A09G014000 Gossypium hirsutum HOM05D004951 ORTHO05D005840 2.1e-66 256.1 192 65.1
Gohir.D02G097900 Gossypium hirsutum HOM05D004951 ORTHO05D005840 2.1e-66 256.1 192 65.1
Gorai.005G111600 Gossypium raimondii HOM05D004951 ORTHO05D005840 2.7e-66 255.8 192 65.1
Gohir.A07G207200 Gossypium hirsutum HOM05D004951 ORTHO05D005840 4.7e-66 255.0 192 64.6
Ca_08030_v3 Cicer arietinum L. HOM05D004951 ORTHO05D005840 1.4e-65 253.4 192 64.6
Nitab4.5_0014171g0010 Nicotiana tabacum HOM05D004951 ORTHO05D005840 1.8e-65 253.1 221 59.3
PSO541G0679 Papaver somniferum HOM05D004951 ORTHO05D005840 1.8e-65 253.1 189 65.6
ClCG11G002570 Citrullus lanatus HOM05D004951 ORTHO05D005840 2.3e-65 252.7 193 63.2
Cfa013928 Carpinus fangiana HOM05D004951 ORTHO05D005840 5.2e-65 251.5 192 64.6
Lalb_Chr03g0040521 Lupinus albus HOM05D004951 ORTHO05D005840 5.2e-65 251.5 192 65.1
Manes.05G149800 Manihot esculenta HOM05D004951 ORTHO05D005840 6.8e-65 251.1 177 71.8
PSO675G8856 Papaver somniferum HOM05D004951 ORTHO05D005840 6.8e-65 251.1 189 64.6
Phvul.008G050600 Phaseolus vulgaris HOM05D004951 ORTHO05D005840 6.8e-65 251.1 192 65.1
Thecc.08G041400 Theobroma cacao HOM05D004951 ORTHO05D005840 6.8e-65 251.1 192 65.1
Ciclev10002352m.g Citrus clementina HOM05D004951 ORTHO05D005840 1.2e-64 250.4 192 65.1
Glyma.09G246500 Glycine max HOM05D004951 ORTHO05D005840 1.2e-64 250.4 192 64.6
Sabra05G0183100 Salix brachista HOM05D004951 ORTHO05D005840 1.5e-64 250.0 177 67.2
HanXRQChr10g0300951 Helianthus annuus HOM05D004951 ORTHO05D005840 2.6e-64 249.2 182 67.0
Potri.005G236800 Populus trichocarpa HOM05D004951 ORTHO05D005840 4.4e-64 248.4 177 67.2
Duzib116G0591 Durio zibethinus HOM05D004951 ORTHO05D005840 5.7e-64 248.1 192 64.1
HanXRQChr02g0039471 Helianthus annuus HOM05D004951 ORTHO05D005840 7.5e-64 247.7 182 66.5
Psat6g222440 Pisum sativum HOM05D004951 ORTHO05D005840 9.8e-64 247.3 192 63.0
PGR031G1064 Punica granatum HOM05D004951 ORTHO05D005840 1.3e-63 246.9 187 65.8
PSO675G7262 Papaver somniferum HOM05D004951 ORTHO05D005840 1.7e-63 246.5 191 64.9
Eucgr.E00855 Eucalyptus grandis HOM05D004951 ORTHO05D005840 2.8e-63 245.7 192 64.1
Nn5g29279 Nelumbo nucifera HOM05D004951 ORTHO05D005840 2.8e-63 245.7 192 62.0
Gohir.A07G207300 Gossypium hirsutum HOM05D004951 ORTHO05D005840 3.7e-63 245.4 192 62.5
Cpa.g.sc26.26 Carica papaya HOM05D004951 ORTHO05D005840 6.3e-63 244.6 192 62.0
ClCG05G018480 Citrullus lanatus HOM05D004951 ORTHO05D005840 6.3e-63 244.6 194 60.8
Lsat_1_v5_gn_8_80440 Lactuca sativa HOM05D004951 ORTHO05D005840 6.3e-63 244.6 182 65.4
Sc02g0008460 Simmondsia chinensis HOM05D004951 ORTHO05D005840 6.3e-63 244.6 192 65.6
CANSAT78G0251 Cannabis sativa HOM05D004951 ORTHO05D005840 8.3e-63 244.2 192 62.5
MD10G1149500 Malus domestica HOM05D004951 ORTHO05D005840 8.3e-63 244.2 192 63.5
Sed0001853 Sechium edule HOM05D004951 ORTHO05D005840 8.3e-63 244.2 192 60.9
ECA236G4786 Erigeron canadensis HOM05D004951 ORTHO05D005840 1.8e-62 243.0 180 66.7
Carub.0002s2250 Capsella rubella HOM05D004951 ORTHO05D005840 2.4e-62 242.7 192 60.9
VMungo1383G3289 Vigna mungo HOM05D004951 ORTHO05D005840 2.4e-62 242.7 192 63.5
Potri.002G024601 Populus trichocarpa HOM05D004951 ORTHO05D005840 3.1e-62 242.3 177 65.0
CsaV3_3G045700 Cucumis sativus L. HOM05D004951 ORTHO05D005840 5.4e-62 241.5 184 63.6
MD05G1155200 Malus domestica HOM05D004951 ORTHO05D005840 1.2e-61 240.4 192 62.0
Aa31LG4G5890 Aethionema arabicum HOM05D004951 ORTHO05D005840 1.6e-61 240.0 192 60.4
PGR031G3408 Punica granatum HOM05D004951 ORTHO05D005840 1.6e-61 240.0 189 64.0
Actinidia28598 Actinidia chinensis HOM05D004951 ORTHO05D005840 5.9e-61 238.0 192 64.1
AL2G35650 Arabidopsis lyrata HOM05D004951 ORTHO05D005840 1.3e-60 236.9 192 57.8
Thhalv10019169m.g Eutrema salsugineum HOM05D004951 ORTHO05D005840 1.3e-60 236.9 192 59.9
Dinv31828 Davidia involucrata HOM05D004951 ORTHO05D005840 1.7e-60 236.5 155 74.2
CARHR069060 Cardamine hirsuta HOM05D004951 ORTHO05D005840 2.9e-60 235.7 192 57.3
Lj1g0015493 Lotus japonicus HOM05D004951 ORTHO05D005840 3.8e-60 235.3 192 60.4
TWI56G1488 Tripterygium wilfordii HOM05D004951 ORTHO05D005840 1.1e-59 233.8 192 60.9
AT1G75670 Arabidopsis thaliana HOM05D004951 ORTHO05D005840 1.5e-59 233.4 192 56.8
Sp5g30770 Schrenkiella parvula HOM05D004951 ORTHO05D005840 1.5e-59 233.4 190 60.5
TPR.G15148 Trifolium pratense HOM05D004951 ORTHO05D005840 1.5e-59 233.4 192 61.5
unitig_8.g4914 Utricularia gibba HOM05D004951 ORTHO05D005840 1.9e-59 233.0 196 60.2
TWI34G1799 Tripterygium wilfordii HOM05D004951 ORTHO05D005840 5.5e-59 231.5 192 59.4
Prupe.8G188100 Prunus persica HOM05D004951 ORTHO05D005840 6.1e-58 228.0 192 60.9
BcaC03g15607 Brassica carinata HOM05D004951 ORTHO05D005840 1.0e-57 227.3 192 56.2
BolC2t09323H Brassica oleracea HOM05D004951 ORTHO05D005840 1.0e-57 227.3 192 56.2
Ah.02g126690 Amaranthus hybridus HOM05D004951 ORTHO05D005840 1.8e-57 226.5 183 61.7
C02p33810 Brassica napus HOM05D004951 ORTHO05D005840 1.8e-57 226.5 188 56.9
Eucgr.F02088 Eucalyptus grandis HOM05D004951 ORTHO05D005840 1.8e-57 226.5 192 60.4
arahy.Tifrunner.gnm1.ann1.1I2LZG Arachis hypogaea HOM05D004951 ORTHO05D005840 2.3e-57 226.1 193 60.1
BraA02t07047Z Brassica rapa HOM05D004951 ORTHO05D005840 5.2e-57 224.9 192 55.7
arahy.Tifrunner.gnm1.ann1.T7R5G6 Arachis hypogaea HOM05D004951 ORTHO05D005840 6.8e-57 224.6 193 60.1
arahy.Tifrunner.gnm1.ann1.5C4441 Arachis hypogaea HOM05D004951 ORTHO05D005840 8.8e-57 224.2 182 61.5
A02p20120 Brassica napus HOM05D004951 ORTHO05D005840 8.8e-57 224.2 188 56.4
EL10Ac1g02264 Beta vulgaris HOM05D004951 ORTHO05D005840 7.5e-56 221.1 193 57.5
AUR62035728 Chenopodium quinoa HOM05D004951 ORTHO05D005840 7.5e-56 221.1 194 58.2
Medtr7g080860 Medicago truncatula HOM05D004951 ORTHO05D005840 1.3e-55 220.3 188 58.0
AUR62035440 Chenopodium quinoa HOM05D004951 ORTHO05D005840 2.2e-55 219.5 189 59.3
TAR625G0428 Trochodendron aralioides HOM05D004951 ORTHO05D005840 3.1e-54 215.7 155 65.8
BcaC08g47055 Brassica carinata HOM05D004951 ORTHO05D005840 7.0e-54 214.5 184 54.3
HPP92_017328 Vanilla planifolia HOM05D004951 ORTHO05D005840 1.6e-53 213.4 176 59.7
Atru.chr13.322 Acer truncatum HOM05D004951 ORTHO05D005840 3.5e-53 212.2 159 66.0
Nn1g08637 Nelumbo nucifera HOM05D004951 ORTHO05D005840 7.7e-53 211.1 152 65.8
Aqoxy3G00621 Aquilegia oxysepala HOM05D004951 ORTHO05D005840 1.7e-52 209.9 196 56.1
Sed0010580 Sechium edule HOM05D004951 ORTHO05D005840 6.6e-52 208.0 195 53.3
FvH4_2g17590 Fragaria vesca HOM05D004951 ORTHO05D005840 1.5e-51 206.8 192 54.7
FAN24G1417 Fragaria x ananassa HOM05D004951 ORTHO05D005840 1.5e-51 206.8 192 54.7
RcHm_v2.0_Chr6g0282531 Rosa chinensis HOM05D004951 ORTHO05D005840 1.5e-51 206.8 192 54.2
DCAR_008455 Daucus carota HOM05D004951 ORTHO05D005840 7.3e-51 204.5 161 61.5
FAN15G2157 Fragaria x ananassa HOM05D004951 ORTHO05D005840 7.3e-51 204.5 192 54.2
CDE05G3598 Ceratophyllum demersum HOM05D004951 ORTHO05D005840 9.5e-51 204.1 183 54.1
CDE12G0586 Ceratophyllum demersum HOM05D004951 ORTHO05D005840 1.6e-50 203.4 184 55.4
Haze_22610 Corylus avellana HOM05D004951 ORTHO05D005840 1.0e-49 200.7 214 52.8
Lj4A795G31 Lonicera japonica HOM05D004951 ORTHO05D005840 1.0e-49 200.7 124 77.4
FAN27G0910 Fragaria x ananassa HOM05D004951 ORTHO05D005840 1.4e-49 200.3 210 51.0
FAN15G3167 Fragaria x ananassa HOM05D004951 ORTHO05D005840 1.8e-49 199.9 187 54.5
BcaB05g24929 Brassica carinata HOM05D000120 ORTHO05D000068 2.0e-45 186.4 178 53.4
Lalb_Chr01g0021631 Lupinus albus HOM05D004951 ORTHO05D005840 8.6e-44 181.0 192 51.6
CAN.G230.10 Capsicum annuum HOM05D004951 ORTHO05D005840 1.5e-43 180.3 131 67.9
Gohir.A02G093500 Gossypium hirsutum HOM05D004951 ORTHO05D005840 2.5e-43 179.5 142 60.6
MBI05_g38365_MAGBIO Magnolia biondii HOM05D004951 ORTHO05D005840 8.0e-42 174.5 231 45.0
Os12g0533600 Oryza sativa ssp. japonica HOM05D004951 ORTHO05D005840 3.4e-40 169.1 185 47.6
ATR0068G029 Amborella trichopoda HOM05D004951 ORTHO05D005840 3.7e-39 165.6 195 47.2
Zm00001eb410680 Zea mays HOM05D004951 ORTHO05D005840 9.2e-38 161.0 219 44.3
SEGI_29847 Sequoiadendron giganteum HOM05D004951 ORTHO05D005840 3.5e-37 159.1 194 46.4
Os06g0168400 Oryza sativa ssp. japonica HOM05D004951 ORTHO05D005840 1.3e-36 157.1 154 52.6
Mapoly0115s0026 Marchantia polymorpha HOM05D004951 ORTHO05D005840 7.5e-32 141.4 195 41.5
Pp3c15_23380 Physcomitrium patens HOM05D004951 ORTHO05D005840 3.7e-31 139.0 197 40.6
PGSC0003DMG400019052 Solanum tuberosum HOM05D004951 ORTHO05D005840 6.4e-31 138.3 115 59.1
AagrBONN_evm.TU.Sc2ySwM_344.4244 Anthoceros agrestis HOM05D004951 ORTHO05D005840 1.2e-29 134.0 183 42.1
AagrBONN_evm.TU.Sc2ySwM_368.3390 Anthoceros agrestis HOM05D004951 ORTHO05D005840 2.1e-29 133.3 184 41.8
SMO356G0424 Selaginella moellendorffii HOM05D004951 ORTHO05D005840 1.1e-25 120.9 193 38.9
Hma1.2p1_2299F.1_g319190 Hydrangea macrophylla HOM05D004951 ORTHO05D005840 2.9e-23 112.8 76 71.1
Sed0021847 Sechium edule HOM05D004951 ORTHO05D005840 7.1e-22 108.2 143 42.0
ATR0585G020 Amborella trichopoda HOM05D004951 ORTHO05D005840 1.4e-17 94.0 88 53.4
SEGI_15858 Sequoiadendron giganteum HOM05D004951 ORTHO05D005840 6.9e-17 91.7 95 51.6
BolC6t40000H Brassica oleracea HOM05D004951 ORTHO05D005840 7.8e-13 78.2 58 55.2
CBR_g74690 Chara braunii HOM05D004951 ORTHO05D005840 1.6e-10 70.5 137 32.8


User provided reference genes

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