Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu056856.1 Olea europaea HOM05D005171 ORTHO05D006343 0.0e+00 2516.5 1338 100.0
Migut.M00063 Erythranthe guttata HOM05D005171 ORTHO05D006343 1.3e-244 850.9 1360 42.9
SGA_v2.0_scaffold181G39698 Striga asiatica HOM05D005171 ORTHO05D006343 4.4e-224 782.7 1396 40.2
Actinidia20619 Actinidia chinensis HOM05D005171 ORTHO05D006343 5.1e-212 742.7 1370 40.3
Actinidia20605 Actinidia chinensis HOM05D005171 ORTHO05D006343 1.9e-206 724.2 1342 40.3
SalBow7G0294 Salvia bowleyana HOM05D005171 ORTHO05D006343 2.8e-194 683.7 1196 40.7
Sopen07g023720 Solanum pennellii HOM05D005171 ORTHO05D006343 2.3e-180 637.5 1400 37.2
Solyc07g045170.3 Solanum lycopersicum HOM05D005171 ORTHO05D006343 1.1e-179 635.2 1395 36.8
Rhsim06G0179100 Rhododendron simsii HOM05D005171 ORTHO05D006343 2.2e-175 620.9 1377 36.9
vmacro12061 Vaccinium macrocarpon HOM05D005171 ORTHO05D000013 8.5e-175 619.0 1482 36.0
Thecc.01G199700 Theobroma cacao HOM05D005171 ORTHO05D006343 6.7e-172 609.4 1401 37.0
QL04p066976 Quercus lobata HOM05D005171 ORTHO05D006343 2.2e-170 604.4 1430 35.1
Peaxi162Scf00359g00324 Petunia axillaris HOM05D005171 ORTHO05D006343 6.5e-167 592.8 1369 35.9
CSS0020778 Camellia sinensis var. sinensis HOM05D005171 ORTHO05D006343 2.1e-165 587.8 1331 36.5
CSS0016995 Camellia sinensis var. sinensis HOM05D005171 ORTHO05D006343 2.7e-165 587.4 1331 36.5
Duzib138G0034 Durio zibethinus HOM05D005171 ORTHO05D006343 2.3e-164 584.3 1424 35.2
Cc05_g01980 Coffea canephora HOM05D005171 ORTHO05D006343 2.8e-162 577.4 1380 36.3
Atru.chr6.3433 Acer truncatum HOM05D005171 ORTHO05D006343 6.3e-162 576.2 1439 34.2
Dinv05326 Davidia involucrata HOM05D005171 ORTHO05D006343 4.2e-158 563.5 926 42.4
DCAR_012742 Daucus carota HOM05D005171 ORTHO05D006343 6.8e-156 556.2 1348 34.9
Haze_12584 Corylus avellana HOM05D005171 ORTHO05D006343 1.2e-155 555.4 1456 33.4
Nitab4.5_0003086g0060 Nicotiana tabacum HOM05D005171 ORTHO05D006343 3.4e-155 553.9 1397 35.9
Cfa014199 Carpinus fangiana HOM05D005171 ORTHO05D006343 7.7e-152 542.7 1408 33.8
COL.COLO4_19656 Corchorus olitorius HOM05D005171 ORTHO05D006343 4.6e-144 516.9 1396 33.5
GSVIVG01030128001 Vitis vinifera HOM05D005171 ORTHO05D006343 6.2e-141 506.5 1238 33.6
Nn1g07734 Nelumbo nucifera HOM05D005171 ORTHO05D006343 2.0e-139 501.5 1352 33.0
Manes.12G067100 Manihot esculenta HOM05D005171 ORTHO05D006343 2.6e-139 501.1 1452 33.1
Gorai.007G164500 Gossypium raimondii HOM05D005171 ORTHO05D006343 7.5e-139 499.6 1416 33.2
Potri.001G315950 Populus trichocarpa HOM05D005171 ORTHO05D006343 3.0e-135 487.6 1438 32.9
TWI36G0325 Tripterygium wilfordii HOM05D005171 ORTHO05D006343 1.5e-134 485.3 1390 33.2
MD17G1119600 Malus domestica HOM05D005171 ORTHO05D006343 4.3e-134 483.8 1385 31.8
Prupe.3G194100 Prunus persica HOM05D005171 ORTHO05D006343 1.6e-133 481.9 1422 31.9
FAN09G0598 Fragaria x ananassa HOM05D005171 ORTHO05D006343 2.2e-130 471.5 1427 30.9
FvH4_6g40370 Fragaria vesca HOM05D005171 ORTHO05D006343 2.4e-129 468.0 1389 31.3
Ciclev10014049m.g Citrus clementina HOM05D005171 ORTHO05D006343 4.1e-129 467.2 1392 32.4
FAN14G5634 Fragaria x ananassa HOM05D005171 ORTHO05D006343 2.1e-128 464.9 1393 31.3
FAN05G5461 Fragaria x ananassa HOM05D005171 ORTHO05D006343 3.3e-126 457.6 1383 32.0
Sabra16G0199800 Salix brachista HOM05D005171 ORTHO05D006343 5.6e-126 456.8 1482 31.4
MD09G1131900 Malus domestica HOM05D005171 ORTHO05D006343 7.3e-126 456.4 1399 31.7
Lj1C801G5 Lonicera japonica HOM05D005171 ORTHO05D006343 8.9e-124 449.5 1398 31.2
RcHm_v2.0_Chr2g0155571 Rosa chinensis HOM05D005171 ORTHO05D006343 9.9e-123 446.0 1381 31.7
Sed0010628 Sechium edule HOM05D005171 ORTHO05D006343 1.6e-120 438.7 1418 31.7
CANSAT64G2466 Cannabis sativa HOM05D005171 ORTHO05D006343 4.6e-120 437.2 1370 31.5
Sed0008164 Sechium edule HOM05D005171 ORTHO05D006343 6.0e-120 436.8 1379 31.6
FAN02G4474 Fragaria x ananassa HOM05D005171 ORTHO05D006343 1.0e-119 436.0 1380 30.9
Nitab4.5_0004941g0030 Nicotiana tabacum HOM05D005171 ORTHO05D006343 2.4e-116 424.9 1376 31.8
CsaV3_7G002340 Cucumis sativus L. HOM05D005171 ORTHO05D006343 1.4e-113 415.6 1414 31.3
HanXRQChr13g0389891 Helianthus annuus HOM05D005171 ORTHO05D006343 3.3e-110 404.4 1325 30.9
Gohir.D11G154400 Gossypium hirsutum HOM05D005171 ORTHO05D006343 2.4e-108 398.3 1275 31.0
ClCG02G003060 Citrullus lanatus HOM05D005171 ORTHO05D006343 3.8e-106 391.0 1397 31.4
PGR083G1863 Punica granatum HOM05D005171 ORTHO05D006343 1.2e-104 386.0 1413 29.7
EL10Ac2g03228 Beta vulgaris HOM05D005171 ORTHO05D006343 3.9e-103 380.9 1376 29.5
Lalb_Chr10g0094191 Lupinus albus HOM05D005171 ORTHO05D006343 8.7e-103 379.8 1329 30.3
MBI14_g37363_MAGBIO Magnolia biondii HOM05D005171 ORTHO05D006343 8.1e-101 373.2 1410 29.9
Hund13065 Selenicereus undatus HOM05D005171 ORTHO05D006343 8.1e-101 373.2 1393 29.1
unitig_37.g12589 Utricularia gibba HOM05D005171 ORTHO05D006343 1.8e-100 372.1 1356 31.0
Sc20g0003130 Simmondsia chinensis HOM05D005171 ORTHO05D006343 1.9e-97 362.1 1373 28.3
Lj6g0011858 Lotus japonicus HOM05D005171 ORTHO05D006343 1.0e-95 356.3 1336 30.4
THA.LOC104815372 Tarenaya hassleriana HOM05D005171 ORTHO05D006343 3.0e-95 354.8 1401 29.3
HanXRQChr09g0257391 Helianthus annuus HOM05D005171 ORTHO05D006343 5.8e-91 340.5 1322 28.5
Thhalv10002382m.g Eutrema salsugineum HOM05D005171 ORTHO05D006343 2.7e-88 331.6 1337 28.7
TAR627G0657 Trochodendron aralioides HOM05D005171 ORTHO05D006343 6.0e-88 330.5 833 35.9
Lsat_1_v5_gn_7_97220 Lactuca sativa HOM05D005171 ORTHO05D006343 1.8e-87 328.9 1259 29.5
Cpa.g.sc136.57 Carica papaya HOM05D005171 ORTHO05D006343 1.1e-86 326.2 1262 28.8
Sp3g23130 Schrenkiella parvula HOM05D005171 ORTHO05D006343 1.9e-86 325.5 1340 29.0
Gohir.A11G147500 Gossypium hirsutum HOM05D005171 ORTHO05D006343 7.4e-86 323.6 1162 30.1
Aa31sc733G10 Aethionema arabicum HOM05D005171 ORTHO05D006343 6.5e-82 310.5 1349 27.6
PSO541G4744 Papaver somniferum HOM05D005171 ORTHO05D006343 6.5e-82 310.5 1566 25.5
Psat5g105360 Pisum sativum HOM05D005171 ORTHO05D006343 8.5e-82 310.1 1555 27.0
Ca_16333_v3 Cicer arietinum L. HOM05D005171 ORTHO05D006343 1.4e-81 309.3 1336 28.1
Ca_30417_v3 Cicer arietinum L. HOM05D005171 ORTHO05D006343 1.4e-81 309.3 1336 28.1
A07p06800 Brassica napus HOM05D005171 ORTHO05D006343 5.5e-81 307.4 1340 27.8
MELO3C024178.2 Cucumis melo HOM05D005171 ORTHO05D006343 4.6e-80 304.3 1385 27.9
Glyma.13G008500 Glycine max HOM05D005171 ORTHO05D006343 6.1e-80 303.9 1349 28.2
AL3G41930 Arabidopsis lyrata HOM05D005171 ORTHO05D006343 1.8e-79 302.4 1383 27.7
Ah.10g032550 Amaranthus hybridus HOM05D005171 ORTHO05D006343 2.3e-79 302.0 1353 27.1
BcaB06g26770 Brassica carinata HOM05D005171 ORTHO05D006343 1.9e-78 298.9 1333 27.5
BcaC06g35856 Brassica carinata HOM05D005171 ORTHO05D006343 2.5e-78 298.5 1336 27.7
BolC7t41487H Brassica oleracea HOM05D005171 ORTHO05D006343 2.5e-78 298.5 1336 27.7
TAR627G0484 Trochodendron aralioides HOM05D005171 ORTHO05D006343 7.4e-78 297.0 325 49.8
C07p10370 Brassica napus HOM05D005171 ORTHO05D006343 4.8e-77 294.3 1336 27.5
Gohir.D08G059000 Gossypium hirsutum HOM05D005171 ORTHO05D006343 6.3e-77 293.9 961 31.2
BraA07t28471Z Brassica rapa HOM05D005171 ORTHO05D006343 1.4e-76 292.7 1344 27.5
AT2G04235 Arabidopsis thaliana HOM05D005171 ORTHO05D006343 2.4e-76 292.0 1361 26.7
Gorai.004G060900 Gossypium raimondii HOM05D005171 ORTHO05D006343 5.3e-76 290.8 957 31.2
AUR62037747 Chenopodium quinoa HOM05D005171 ORTHO05D006343 3.2e-73 281.6 1415 26.1
AUR62018228 Chenopodium quinoa HOM05D005171 ORTHO05D006343 9.7e-70 270.0 1420 26.1
CiPaw.03G284100 Carya illinoinensis HOM05D005171 ORTHO05D006343 2.9e-66 258.5 431 39.2
Eucgr.A01375 Eucalyptus grandis HOM05D005171 ORTHO05D006343 3.8e-66 258.1 455 36.3
VMungo0540G0527 Vigna mungo HOM05D005171 ORTHO05D006343 8.5e-66 256.9 1370 26.1
CDE01G0402 Ceratophyllum demersum HOM05D005171 ORTHO05D006343 3.9e-63 248.1 1406 25.2
arahy.Tifrunner.gnm1.ann1.U10BM9 Arachis hypogaea HOM05D005171 ORTHO05D006343 9.7e-62 243.4 1318 26.0
Carub.0003s2593 Capsella rubella HOM05D005171 ORTHO05D006343 1.7e-61 242.7 1382 25.3
Glyma.20G060900 Glycine max HOM05D005171 ORTHO05D006343 2.8e-61 241.9 482 36.3
Lsat_1_v5_gn_9_102901 Lactuca sativa HOM05D005171 ORTHO05D006343 2.4e-60 238.8 1350 25.7
PSO017G5154 Papaver somniferum HOM05D005171 ORTHO05D006343 2.4e-60 238.8 1360 25.4
ECA240G4228 Erigeron canadensis HOM05D005171 ORTHO05D006343 2.0e-59 235.7 545 33.0
arahy.Tifrunner.gnm1.ann1.DUBF95 Arachis hypogaea HOM05D005171 ORTHO05D006343 4.7e-56 224.6 420 36.9
Hma1.2p1_0629F.1_g192130 Hydrangea macrophylla HOM05D005171 ORTHO05D006343 1.4e-55 223.0 279 47.0
Phvul.006G005000 Phaseolus vulgaris HOM05D005171 ORTHO05D006343 2.3e-55 222.2 1337 25.7
ATR0751G269 Amborella trichopoda HOM05D005171 ORTHO05D006343 9.7e-54 216.9 1584 24.9
HPP92_000125 Vanilla planifolia HOM05D005171 ORTHO05D006343 1.4e-52 213.0 1367 23.2
arahy.Tifrunner.gnm1.ann1.DEY0FQ Arachis hypogaea HOM05D005171 ORTHO05D006343 7.7e-51 207.2 326 39.9
arahy.Tifrunner.gnm1.ann1.CJRH42 Arachis hypogaea HOM05D005171 ORTHO05D006343 5.5e-49 201.1 526 30.2
Aqoxy1G04295 Aquilegia oxysepala HOM05D005171 ORTHO05D006343 1.2e-48 199.9 1336 25.4
MBI14_g33664_MAGBIO Magnolia biondii HOM05D005171 ORTHO05D006343 1.0e-47 196.8 273 42.1
PSO478G2888 Papaver somniferum HOM05D005171 ORTHO05D006343 4.8e-45 188.0 326 35.9
VMungo0331G1557 Vigna mungo HOM05D005171 ORTHO05D006343 1.4e-44 186.4 485 32.0
Dinv21324 Davidia involucrata HOM05D005171 ORTHO05D006343 3.1e-44 185.3 153 62.7
Gohir.A08G049000 Gossypium hirsutum HOM05D005171 ORTHO05D006343 4.5e-43 181.4 823 28.8
Oeu036991.1 Olea europaea HOM05D005171 ORTHO05D006343 1.5e-41 176.4 123 79.7
Hma1.2p1_0629F.1_g192120 Hydrangea macrophylla HOM05D005171 ORTHO05D006343 3.2e-41 175.3 268 48.5
Duzib211G0583 Durio zibethinus HOM05D005171 ORTHO05D006343 2.2e-37 162.5 146 53.4
TPR.G27424 Trifolium pratense HOM05D005171 ORTHO05D006343 1.4e-36 159.8 236 45.8
arahy.Tifrunner.gnm1.ann1.AZD9M5 Arachis hypogaea HOM05D005171 ORTHO05D006343 9.2e-36 157.1 296 39.5
Zm00001eb386590 Zea mays HOM05D005171 ORTHO05D006343 2.1e-32 146.0 1334 20.8
PSO478G0307 Papaver somniferum HOM05D005171 ORTHO05D006343 2.3e-26 125.9 288 38.5
PGSC0003DMG400017412 Solanum tuberosum HOM05D005171 ORTHO05D006343 2.3e-26 125.9 124 54.0
Os06g0608100 Oryza sativa ssp. japonica HOM05D005171 ORTHO05D006343 1.5e-25 123.2 247 36.4
Glyma.20G061000 Glycine max HOM05D005171 ORTHO05D006343 2.5e-25 122.5 247 40.1
Actinidia12355 Actinidia chinensis HOM05D005171 ORTHO05D006343 5.8e-22 111.3 537 28.9
PSO675G6191 Papaver somniferum HOM05D005171 ORTHO05D006343 3.7e-21 108.6 135 45.2
CANSAT11G0838 Cannabis sativa HOM05D005171 ORTHO05D006343 1.6e-16 93.2 91 53.8
TPR.G30970 Trifolium pratense HOM05D005171 ORTHO05D006343 8.1e-16 90.9 146 37.0
SalBow7G0566 Salvia bowleyana HOM05D005171 ORTHO05D006343 2.3e-15 89.4 127 44.9
SEGI_15711 Sequoiadendron giganteum HOM05D005171 ORTHO05D006343 4.4e-14 85.1 120 37.5
DCAR_030665 Daucus carota HOM05D005171 ORTHO05D006343 3.7e-13 82.0 76 55.3
ECA240G0272 Erigeron canadensis HOM05D004103 ORTHO05D005242 4.1e-12 78.6 121 46.3
DCAR_030669 Daucus carota HOM05D001959 ORTHO05D006343 3.5e-11 75.5 226 29.2
SEGI_14020 Sequoiadendron giganteum HOM05D005171 ORTHO05D026698 3.9e-10 72.0 274 28.8
MD09G1132400 Malus domestica HOM05D005171 ORTHO05D006343 4.3e-09 68.6 167 33.5
Gohir.A11G147450 Gossypium hirsutum HOM05D005171 ORTHO05D006343 1.2e-08 67.0 111 53.2
Gohir.D11G154350 Gossypium hirsutum HOM05D005171 ORTHO05D006343 4.0e-07 62.0 110 50.0
CDE02G3322 Ceratophyllum demersum HOM05D005171 ORTHO05D006343 5.2e-07 61.6 130 35.4
Cpa.g.sc136.58 Carica papaya HOM05D005171 ORTHO05D006343 4.4e-06 58.5 142 36.6
Cpa.g.c43179 Carica papaya HOM05D005171 ORTHO05D006343 5.8e-06 58.2 139 39.6


User provided reference genes

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