Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu056715.1 Olea europaea HOM05D002763 ORTHO05D002972 2.3e-54 215.3 108 100.0
Oeu004006.1 Olea europaea HOM05D002462 ORTHO05D002893 1.7e-20 102.8 106 56.6
Oeu044672.1 Olea europaea HOM05D002763 ORTHO05D002972 3.7e-20 101.7 83 63.9
Oeu064555.1 Olea europaea HOM05D002763 ORTHO05D002972 9.1e-19 97.1 83 62.7
Migut.L01884 Erythranthe guttata HOM05D002763 ORTHO05D002972 3.0e-14 82.0 89 52.8
Migut.J00801 Erythranthe guttata HOM05D002763 ORTHO05D002972 8.8e-14 80.5 67 59.7
MSTRG.5942 Avicennia marina HOM05D002763 ORTHO05D002972 1.3e-12 76.6 67 53.7
SalBow3G4096 Salvia bowleyana HOM05D002763 ORTHO05D002972 1.7e-12 76.3 68 55.9
SGA_v2.0_scaffold31G12762 Striga asiatica HOM05D002763 ORTHO05D002972 2.8e-12 75.5 65 56.9
SGA_v2.0_scaffold231G43411 Striga asiatica HOM05D002763 ORTHO05D002972 6.3e-12 74.3 66 60.6
SalBow5G4526 Salvia bowleyana HOM05D002763 ORTHO05D002972 2.4e-11 72.4 67 50.7
DCAR_019803 Daucus carota HOM05D002763 ORTHO05D002972 5.9e-10 67.8 60 56.7
Peaxi162Scf01600g00015 Petunia axillaris HOM05D002763 ORTHO05D002972 1.0e-09 67.0 61 54.1
vmacro20817 Vaccinium macrocarpon HOM05D002763 ORTHO05D002972 2.9e-09 65.5 60 53.3
EL10Ac8g18334 Beta vulgaris HOM05D002763 ORTHO05D002972 3.8e-09 65.1 63 52.4
Nitab4.5_0000617g0050 Nicotiana tabacum HOM05D002763 ORTHO05D002972 5.0e-09 64.7 95 44.2
Nitab4.5_0008862g0030 Nicotiana tabacum HOM05D002763 ORTHO05D002972 2.5e-08 62.4 58 55.2
unitig_749.g14197 Utricularia gibba HOM05D002763 ORTHO05D002972 2.5e-08 62.4 90 41.1
Ah.14g083520 Amaranthus hybridus HOM05D002763 ORTHO05D002972 3.2e-08 62.0 63 50.8
Lsat_1_v5_gn_7_56340 Lactuca sativa HOM05D002763 ORTHO05D002972 3.2e-08 62.0 82 45.1
CSS0013694 Camellia sinensis var. sinensis HOM05D002763 ORTHO05D002972 7.2e-08 60.8 60 48.3
HanXRQChr03g0068451 Helianthus annuus HOM05D002763 ORTHO05D002972 9.4e-08 60.5 82 43.9
CDE06G0951 Ceratophyllum demersum HOM05D002763 ORTHO05D002972 1.2e-07 60.1 63 47.6
unitig_27.g24758 Utricularia gibba HOM05D002763 ORTHO05D002972 1.2e-07 60.1 65 47.7
unitig_699.g19405 Utricularia gibba HOM05D002763 ORTHO05D002972 2.7e-07 58.9 64 46.9
HanXRQChr05g0140091 Helianthus annuus HOM05D002763 ORTHO05D002972 3.6e-07 58.5 60 50.0
Nn8g40794 Nelumbo nucifera HOM05D002763 ORTHO05D002972 3.6e-07 58.5 60 50.0
MBI13_g34038_MAGBIO Magnolia biondii HOM05D002763 ORTHO05D002972 4.7e-07 58.2 64 45.3
Rhsim01G0117300 Rhododendron simsii HOM05D002763 ORTHO05D002972 4.7e-07 58.2 62 46.8
HanXRQChr14g0438641 Helianthus annuus HOM05D002763 ORTHO05D002972 6.1e-07 57.8 62 46.8
Actinidia02502 Actinidia chinensis HOM05D002763 ORTHO05D002972 1.0e-06 57.0 60 45.0
ATR0626G079 Amborella trichopoda HOM05D002763 ORTHO05D002972 1.0e-06 57.0 68 45.6
CDE02G2077 Ceratophyllum demersum HOM05D002763 ORTHO05D002972 1.0e-06 57.0 63 46.0
AUR62021349 Chenopodium quinoa HOM05D002763 ORTHO05D002972 1.4e-06 56.6 66 43.9
Nn2g12759 Nelumbo nucifera HOM05D002763 ORTHO05D002972 1.4e-06 56.6 60 46.7
Os08g0230000 Oryza sativa ssp. japonica HOM05D002763 ORTHO05D002972 1.8e-06 56.2 67 38.8
Oeu006848.1 Olea europaea HOM05D002763 ORTHO05D002972 2.3e-06 55.8 40 60.0
Hma1.2p1_1326F.1_g275800 Hydrangea macrophylla HOM05D002763 ORTHO05D002972 3.0e-06 55.5 60 46.7
Manes.06G177000 Manihot esculenta HOM05D002763 ORTHO05D002972 3.0e-06 55.5 68 47.1
CAN.G333.12 Capsicum annuum HOM05D002763 ORTHO05D002972 4.0e-06 55.1 55 50.9
Dinv41172 Davidia involucrata HOM05D002763 ORTHO05D002972 4.0e-06 55.1 60 48.3
Hund09061 Selenicereus undatus HOM05D002763 ORTHO05D002972 4.0e-06 55.1 51 43.1
Zm00001eb178110 Zea mays HOM05D002763 ORTHO05D002972 4.0e-06 55.1 78 38.5
ECA240G2099 Erigeron canadensis HOM05D002763 ORTHO05D002972 5.2e-06 54.7 42 54.8
Lsat_1_v5_gn_8_69300 Lactuca sativa HOM05D002763 ORTHO05D002972 5.2e-06 54.7 60 45.0
Dinv25438 Davidia involucrata HOM05D002763 ORTHO05D002972 6.7e-06 54.3 76 40.8
MD16G1249400 Malus domestica HOM05D002763 ORTHO05D002972 6.7e-06 54.3 65 40.0


User provided reference genes

Program Settings