Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu056678.1 Olea europaea HOM05D005359 ORTHO05D006431 3.2e-53 211.5 106 100.0
Oeu033126.1 Olea europaea HOM05D005359 ORTHO05D006431 6.4e-33 144.1 99 74.7
Oeu008891.1 Olea europaea HOM05D005359 ORTHO05D006431 4.3e-29 131.3 104 66.3
TWI14G1253 Tripterygium wilfordii HOM05D005359 ORTHO05D006431 1.3e-25 119.8 104 55.8
Lj5A252T45 Lonicera japonica HOM05D005359 ORTHO05D006431 2.2e-25 119.0 104 60.6
TWI23G0911 Tripterygium wilfordii HOM05D005359 ORTHO05D006431 8.3e-25 117.1 104 55.8
CiPaw.06G147600 Carya illinoinensis HOM05D005359 ORTHO05D006431 1.1e-24 116.7 106 55.7
Ciclev10001293m.g Citrus clementina HOM05D005359 ORTHO05D006431 1.1e-24 116.7 106 56.6
Eucgr.I02722 Eucalyptus grandis HOM05D005359 ORTHO05D006431 1.9e-24 115.9 106 56.6
Thecc.02G038700 Theobroma cacao HOM05D005359 ORTHO05D006431 1.9e-24 115.9 104 55.8
MSTRG.5231 Avicennia marina HOM05D005359 ORTHO05D006431 3.2e-24 115.2 104 55.8
Dinv19364 Davidia involucrata HOM05D005359 ORTHO05D006431 3.2e-24 115.2 104 57.7
SalBow6G6401 Salvia bowleyana HOM05D005359 ORTHO05D006431 5.4e-24 114.4 104 56.7
CiPaw.05G044000 Carya illinoinensis HOM05D005359 ORTHO05D006431 7.0e-24 114.0 106 55.7
Manes.07G015400 Manihot esculenta HOM05D005359 ORTHO05D006431 7.0e-24 114.0 106 54.7
Aqoxy5G02275 Aquilegia oxysepala HOM05D005359 ORTHO05D006431 9.2e-24 113.6 103 55.3
QL08p043348 Quercus lobata HOM05D005359 ORTHO05D006431 9.2e-24 113.6 104 55.8
COL.COLO4_17869 Corchorus olitorius HOM05D005359 ORTHO05D006431 1.2e-23 113.2 104 54.8
SGA_v2.0_scaffold292G47368 Striga asiatica HOM05D005359 ORTHO05D006431 1.2e-23 113.2 79 67.1
Sed0010360 Sechium edule HOM05D005359 ORTHO05D006431 2.0e-23 112.5 106 54.7
TAR628G1654 Trochodendron aralioides HOM05D005359 ORTHO05D006431 2.0e-23 112.5 102 55.9
CSS0043414 Camellia sinensis var. sinensis HOM05D005359 ORTHO05D006431 2.7e-23 112.1 104 55.8
Duzib052G1228 Durio zibethinus HOM05D005359 ORTHO05D006431 2.7e-23 112.1 104 54.8
vmacro01763 Vaccinium macrocarpon HOM05D005359 ORTHO05D006431 2.7e-23 112.1 104 54.8
Ca_00078_v3 Cicer arietinum L. HOM05D005359 ORTHO05D006431 3.5e-23 111.7 104 56.7
Gohir.D01G169300 Gossypium hirsutum HOM05D005359 ORTHO05D006431 3.5e-23 111.7 106 53.8
Gorai.002G210900 Gossypium raimondii HOM05D005359 ORTHO05D006431 3.5e-23 111.7 106 53.8
TAR376G0200 Trochodendron aralioides HOM05D005359 ORTHO05D006431 3.5e-23 111.7 102 55.9
CSS0002632 Camellia sinensis var. sinensis HOM05D005359 ORTHO05D006431 4.6e-23 111.3 104 55.8
Cfa005525 Carpinus fangiana HOM05D005359 ORTHO05D006431 4.6e-23 111.3 104 55.8
Haze_01666 Corylus avellana HOM05D005359 ORTHO05D006431 4.6e-23 111.3 104 55.8
ClCG09G014240 Citrullus lanatus HOM05D005359 ORTHO05D006431 6.0e-23 110.9 78 65.4
Dinv24279 Davidia involucrata HOM05D005359 ORTHO05D006431 6.0e-23 110.9 104 57.7
Gorai.008G042100 Gossypium raimondii HOM05D005359 ORTHO05D006431 6.0e-23 110.9 104 54.8
RcHm_v2.0_Chr7g0222501 Rosa chinensis HOM05D005359 ORTHO05D006431 6.0e-23 110.9 79 64.6
Gohir.A01G178400 Gossypium hirsutum HOM05D005359 ORTHO05D006431 7.8e-23 110.5 106 53.8
Medtr2g007220 Medicago truncatula HOM05D005359 ORTHO05D006431 7.8e-23 110.5 80 63.8
Lj4g0002358 Lotus japonicus HOM05D005359 ORTHO05D006431 1.0e-22 110.2 80 61.2
TPR.G2126 Trifolium pratense HOM05D005359 ORTHO05D006431 1.0e-22 110.2 80 63.8
Gohir.A12G031900 Gossypium hirsutum HOM05D005359 ORTHO05D006431 1.3e-22 109.8 104 54.8
Rhsim11G0129700 Rhododendron simsii HOM05D005359 ORTHO05D006431 1.7e-22 109.4 104 54.8
CARHR011000 Cardamine hirsuta HOM05D005359 ORTHO05D006431 2.3e-22 109.0 79 64.6
Psat2g122240 Pisum sativum HOM05D005359 ORTHO05D006431 2.3e-22 109.0 107 53.3
PGR042G0198 Punica granatum HOM05D005359 ORTHO05D006431 2.3e-22 109.0 85 62.4
Gohir.D12G040400 Gossypium hirsutum HOM05D005359 ORTHO05D006431 3.0e-22 108.6 104 53.8
Lj6g0011599 Lotus japonicus HOM05D005359 ORTHO05D006431 3.0e-22 108.6 79 62.0
Nn5g28206 Nelumbo nucifera HOM05D005359 ORTHO05D006431 3.9e-22 108.2 79 62.0
Prupe.1G568000 Prunus persica HOM05D005359 ORTHO05D006431 3.9e-22 108.2 79 62.0
AL1G21710 Arabidopsis lyrata HOM05D005359 ORTHO05D006431 5.0e-22 107.8 79 64.6
DCAR_013987 Daucus carota HOM05D005359 ORTHO05D006431 5.0e-22 107.8 104 50.0
Thhalv10007703m.g Eutrema salsugineum HOM05D005359 ORTHO05D006431 6.6e-22 107.5 79 62.0
Sabra01G0162800 Salix brachista HOM05D005359 ORTHO05D006431 8.6e-22 107.1 79 65.8
Sp1g09480 Schrenkiella parvula HOM05D005359 ORTHO05D006431 8.6e-22 107.1 79 63.3
MD15G1422700 Malus domestica HOM05D005359 ORTHO05D006431 1.1e-21 106.7 106 50.9
Sc16g0001650 Simmondsia chinensis HOM05D005359 ORTHO05D006431 1.1e-21 106.7 79 63.3
AT1G10780 Arabidopsis thaliana HOM05D005359 ORTHO05D006431 1.5e-21 106.3 79 62.0
arahy.Tifrunner.gnm1.ann1.8TZ9EP Arachis hypogaea HOM05D005359 ORTHO05D006431 1.9e-21 105.9 79 62.0
DCAR_031890 Daucus carota HOM05D005359 ORTHO05D006431 1.9e-21 105.9 104 51.9
FAN08G1144 Fragaria x ananassa HOM05D005359 ORTHO05D006431 2.5e-21 105.5 79 63.3
THA.LOC104809588 Tarenaya hassleriana HOM05D005359 ORTHO05D006431 2.5e-21 105.5 79 63.3
Cpa.g.sc113.63 Carica papaya HOM05D005359 ORTHO05D006431 3.3e-21 105.1 106 51.9
MD08G1228700 Malus domestica HOM05D005359 ORTHO05D006431 3.3e-21 105.1 104 51.9
THA.LOC104819321 Tarenaya hassleriana HOM05D005359 ORTHO05D006431 3.3e-21 105.1 79 64.6
arahy.Tifrunner.gnm1.ann1.HK0KDN Arachis hypogaea HOM05D005359 ORTHO05D006431 4.3e-21 104.8 79 62.0
FvH4_5g29550 Fragaria vesca HOM05D005359 ORTHO05D006431 4.3e-21 104.8 79 63.3
FAN18G3183 Fragaria x ananassa HOM05D005359 ORTHO05D006431 4.3e-21 104.8 79 63.3
Phvul.002G250300 Phaseolus vulgaris HOM05D005359 ORTHO05D006431 4.3e-21 104.8 79 62.0
Lsat_1_v5_gn_5_109981 Lactuca sativa HOM05D005359 ORTHO05D006431 7.3e-21 104.0 106 50.9
MELO3C014388.2 Cucumis melo HOM05D005359 ORTHO05D006431 9.5e-21 103.6 78 61.5
CsaV3_6G037270 Cucumis sativus L. HOM05D005359 ORTHO05D006431 9.5e-21 103.6 78 61.5
Migut.N01041 Erythranthe guttata HOM05D005359 ORTHO05D006431 9.5e-21 103.6 79 65.8
A09p64680 Brassica napus HOM05D005359 ORTHO05D006431 1.2e-20 103.2 79 60.8
BraA09t41824Z Brassica rapa HOM05D005359 ORTHO05D006431 1.2e-20 103.2 79 60.8
Cc02_g22460 Coffea canephora HOM05D005359 ORTHO05D006431 1.2e-20 103.2 104 51.9
Nitab4.5_0002245g0060 Nicotiana tabacum HOM05D005359 ORTHO05D006431 1.2e-20 103.2 79 60.8
Nitab4.5_0007420g0030 Nicotiana tabacum HOM05D005359 ORTHO05D006431 1.2e-20 103.2 79 60.8
PGSC0003DMG400023758 Solanum tuberosum HOM05D005359 ORTHO05D006431 1.2e-20 103.2 79 62.0
unitig_26.g9020 Utricularia gibba HOM05D005359 ORTHO05D006431 1.6e-20 102.8 79 62.0
BolC8t52390H Brassica oleracea HOM05D005359 ORTHO05D006431 2.1e-20 102.4 79 60.8
FAN13G1157 Fragaria x ananassa HOM05D005359 ORTHO05D006431 2.1e-20 102.4 79 62.0
Potri.003G019400 Populus trichocarpa HOM05D005359 ORTHO05D006431 2.1e-20 102.4 104 51.0
Carub.0001s1033 Capsella rubella HOM05D005359 ORTHO05D006431 2.8e-20 102.1 79 62.0
Sabra03G0010900 Salix brachista HOM05D005359 ORTHO05D006431 3.6e-20 101.7 104 51.0
C08p48500 Brassica napus HOM05D005359 ORTHO05D006431 4.7e-20 101.3 79 59.5
Glyma.05G169600 Glycine max HOM05D005359 ORTHO05D006431 4.7e-20 101.3 79 60.8
Glyma.08G185900 Glycine max HOM05D005359 ORTHO05D006431 6.2e-20 100.9 79 58.2
CANSAT11G2649 Cannabis sativa HOM05D005359 ORTHO05D006431 8.1e-20 100.5 106 50.9
Glyma.08G127900 Glycine max HOM05D005359 ORTHO05D006431 8.1e-20 100.5 79 62.0
CANSAT11G0924 Cannabis sativa HOM05D005359 ORTHO05D006431 1.1e-19 100.1 106 50.9
Peaxi162Scf00011g00352 Petunia axillaris HOM05D005359 ORTHO05D006431 1.1e-19 100.1 79 59.5
Glyma.15G046900 Glycine max HOM05D005359 ORTHO05D006431 1.4e-19 99.8 79 58.2
HanXRQChr10g0289981 Helianthus annuus HOM05D005359 ORTHO05D006431 1.8e-19 99.4 88 52.3
ECA236G4790 Erigeron canadensis HOM05D005359 ORTHO05D006431 2.3e-19 99.0 104 47.1
Solyc01g104230.4 Solanum lycopersicum HOM05D005359 ORTHO05D006431 3.1e-19 98.6 79 59.5
VMungo0251G3193 Vigna mungo HOM05D005359 ORTHO05D006431 3.1e-19 98.6 79 60.8
Aa31LG1G4050 Aethionema arabicum HOM05D005359 ORTHO05D006431 5.2e-19 97.8 79 57.0
CDE11G1073 Ceratophyllum demersum HOM05D005359 ORTHO05D006431 5.2e-19 97.8 79 54.4
Sopen01g046670 Solanum pennellii HOM05D005359 ORTHO05D006431 5.2e-19 97.8 79 59.5
Nn1g08733 Nelumbo nucifera HOM05D005359 ORTHO05D006431 6.8e-19 97.4 79 55.7
Thecc.02G038500 Theobroma cacao HOM05D005359 ORTHO05D006431 6.8e-19 97.4 104 46.2
Phvul.006G214300 Phaseolus vulgaris HOM05D005359 ORTHO05D006431 8.9e-19 97.1 80 57.5
ECA234G2063 Erigeron canadensis HOM05D005359 ORTHO05D006431 1.5e-18 96.3 104 48.1
ATR0193G009 Amborella trichopoda HOM05D005359 ORTHO05D006431 2.6e-18 95.5 79 57.0
Hma1.2p1_0217F.1_g092010 Hydrangea macrophylla HOM05D005359 ORTHO05D006431 2.6e-18 95.5 89 56.2
MBI06_g20718_MAGBIO Magnolia biondii HOM05D005359 ORTHO05D006431 2.6e-18 95.5 97 50.5
Os09g0454300 Oryza sativa ssp. japonica HOM05D005359 ORTHO05D006431 2.6e-18 95.5 78 57.7
HanXRQChr06g0169581 Helianthus annuus HOM05D005359 ORTHO05D006431 4.4e-18 94.7 107 46.7
Potri.001G210800 Populus trichocarpa HOM05D005359 ORTHO05D006431 4.4e-18 94.7 79 59.5
EL10Ac6g14556 Beta vulgaris HOM05D005359 ORTHO05D006431 1.3e-17 93.2 79 54.4
CAN.G1577.14 Capsicum annuum HOM05D005359 ORTHO05D006431 1.3e-17 93.2 105 47.6
Zm00001eb100430 Zea mays HOM05D005359 ORTHO05D006431 1.3e-17 93.2 78 55.1
AUR62002965 Chenopodium quinoa HOM05D005359 ORTHO05D006431 2.9e-17 92.0 79 53.2
HPP92_010977 Vanilla planifolia HOM05D005359 ORTHO05D006431 2.9e-17 92.0 79 50.6
AUR62007773 Chenopodium quinoa HOM05D005359 ORTHO05D006431 3.7e-17 91.7 79 53.2
HanXRQChr16g0514561 Helianthus annuus HOM05D005359 ORTHO05D006431 4.9e-17 91.3 88 51.1
Lalb_Chr20g0123431 Lupinus albus HOM05D005359 ORTHO05D006431 6.4e-17 90.9 79 51.9
VMungo0540G0616 Vigna mungo HOM05D005359 ORTHO05D006431 8.3e-17 90.5 79 51.9
Lsat_1_v5_gn_4_48740 Lactuca sativa HOM05D005359 ORTHO05D006431 1.1e-16 90.1 106 46.2
SMO169G0280 Selaginella moellendorffii HOM05D005359 ORTHO05D006431 1.9e-16 89.4 80 53.8
Mapoly0113s0005 Marchantia polymorpha HOM05D005359 ORTHO05D006431 3.2e-16 88.6 79 48.1
Ah.03g138120 Amaranthus hybridus HOM05D005359 ORTHO05D006431 4.1e-16 88.2 97 45.4
Hund05788 Selenicereus undatus HOM05D005359 ORTHO05D006431 2.1e-15 85.9 79 48.1
Sed0018525 Sechium edule HOM05D005359 ORTHO05D006431 2.7e-15 85.5 79 48.1
Zm00001eb176520 Zea mays HOM05D005359 ORTHO05D006431 4.6e-15 84.7 78 53.8
AagrBONN_evm.TU.Sc2ySwM_117.2184 Anthoceros agrestis HOM05D005359 ORTHO05D006431 1.9e-13 79.3 83 42.2
Zm00001eb037840 Zea mays HOM05D005359 ORTHO05D006431 2.5e-13 79.0 78 51.3
Lalb_Chr07g0185731 Lupinus albus HOM05D005359 ORTHO05D006431 7.3e-13 77.4 79 44.3
Dinv24276 Davidia involucrata HOM05D005359 ORTHO05D006431 5.8e-10 67.8 42 73.8
arahy.Tifrunner.gnm1.ann1.3FYK03 Arachis hypogaea HOM05D005359 ORTHO05D006431 2.9e-09 65.5 94 39.4
GSVIVG01022967001 Vitis vinifera HOM05D005359 ORTHO05D006431 3.2e-08 62.0 37 70.3


User provided reference genes

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