Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu056574.1 Olea europaea HOM05D004761 ORTHO05D037944 2.5e-50 201.8 104 100.0
Oeu003182.1 Olea europaea HOM05D004761 ORTHO05D005813 7.4e-26 120.6 84 77.4
MSTRG.843 Avicennia marina HOM05D004761 ORTHO05D005813 5.5e-21 104.4 83 65.1
Migut.E00345 Erythranthe guttata HOM05D004761 ORTHO05D005813 4.3e-18 94.7 83 61.4
SGA_v2.0_scaffold170G38770 Striga asiatica HOM05D004761 ORTHO05D005813 5.7e-18 94.4 81 61.7
Peaxi162Scf00382g00825 Petunia axillaris HOM05D004761 ORTHO05D005813 4.1e-16 88.2 82 58.5
unitig_22.g5574 Utricularia gibba HOM05D004761 ORTHO05D005813 3.4e-15 85.1 85 57.6
unitig_24.g30582 Utricularia gibba HOM05D004761 ORTHO05D005813 3.4e-15 85.1 85 57.6
Dinv21082 Davidia involucrata HOM05D004761 ORTHO05D005813 1.3e-14 83.2 81 58.0
Nitab4.5_0000791g0110 Nicotiana tabacum HOM05D004761 ORTHO05D005813 1.7e-14 82.8 86 58.1
Nitab4.5_0003373g0010 Nicotiana tabacum HOM05D004761 ORTHO05D005813 5.0e-14 81.3 78 62.8
CAN.G610.79 Capsicum annuum HOM05D004761 ORTHO05D005813 1.1e-13 80.1 83 55.4
DCAR_023656 Daucus carota HOM05D004761 ORTHO05D005813 1.4e-13 79.7 83 57.8
Eucgr.G02317 Eucalyptus grandis HOM05D004761 ORTHO05D005813 1.4e-13 79.7 84 52.4
TAR629G2706 Trochodendron aralioides HOM05D004761 ORTHO05D005813 2.5e-13 79.0 80 56.2
Cc11_g10100 Coffea canephora HOM05D004761 ORTHO05D005813 4.2e-13 78.2 91 57.1
Hma1.2p1_0061F.1_g033840 Hydrangea macrophylla HOM05D004761 ORTHO05D005813 4.2e-13 78.2 83 55.4
Lsat_1_v5_gn_3_59080 Lactuca sativa HOM05D004761 ORTHO05D005813 4.2e-13 78.2 83 51.8
Sopen05g005170 Solanum pennellii HOM05D004761 ORTHO05D005813 4.2e-13 78.2 82 56.1
Lj3C1014G6 Lonicera japonica HOM05D004761 ORTHO05D005813 2.1e-12 75.9 75 53.3
BcaB07g30626 Brassica carinata HOM05D004761 ORTHO05D005813 2.7e-12 75.5 76 55.3
HanXRQChr15g0476311 Helianthus annuus HOM05D004761 ORTHO05D005813 2.7e-12 75.5 83 50.6
PGSC0003DMG400014544 Solanum tuberosum HOM05D004761 ORTHO05D005813 2.7e-12 75.5 75 56.0
CiPaw.16G065200 Carya illinoinensis HOM05D004761 ORTHO05D005813 7.9e-12 73.9 81 56.8
Nn4g24161 Nelumbo nucifera HOM05D004761 ORTHO05D005813 7.9e-12 73.9 83 49.4
HanXRQChr17g0552301 Helianthus annuus HOM05D004761 ORTHO05D005813 1.0e-11 73.6 44 81.8
GSVIVG01011891001 Vitis vinifera HOM05D004761 ORTHO05D005813 1.0e-11 73.6 83 51.8
Aqoxy3G00293 Aquilegia oxysepala HOM05D004761 ORTHO05D005813 1.4e-11 73.2 77 53.2
C09p32130 Brassica napus HOM05D004761 ORTHO05D005813 1.8e-11 72.8 81 49.4
AUR62035212 Chenopodium quinoa HOM05D004761 ORTHO05D005813 1.8e-11 72.8 48 75.0
FAN22G1660 Fragaria x ananassa HOM05D004761 ORTHO05D005813 1.8e-11 72.8 81 54.3
BcaC06g31103 Brassica carinata HOM05D004761 ORTHO05D005813 2.3e-11 72.4 79 51.9
QL01p042268 Quercus lobata HOM05D004761 ORTHO05D005813 2.3e-11 72.4 73 58.9
Haze_17489 Corylus avellana HOM05D004761 ORTHO05D005813 3.0e-11 72.0 80 55.0
Thhalv10004759m.g Eutrema salsugineum HOM05D004761 ORTHO05D005813 3.0e-11 72.0 81 53.1
Gohir.A03G147200 Gossypium hirsutum HOM05D004761 ORTHO05D005813 3.0e-11 72.0 88 48.9
Cfa018591 Carpinus fangiana HOM05D004761 ORTHO05D005813 3.9e-11 71.6 73 54.8
Gorai.005G191400 Gossypium raimondii HOM05D004761 ORTHO05D005813 3.9e-11 71.6 88 48.9
EL10Ac6g14394 Beta vulgaris HOM05D004761 ORTHO05D005813 5.1e-11 71.2 50 70.0
CSS0041255 Camellia sinensis var. sinensis HOM05D004761 ORTHO05D005813 5.1e-11 71.2 86 46.5
Gohir.D02G170400 Gossypium hirsutum HOM05D004761 ORTHO05D005813 5.1e-11 71.2 83 49.4
Ah.02g127920 Amaranthus hybridus HOM05D004761 ORTHO05D005813 6.7e-11 70.9 76 50.0
CANSAT01G0623 Cannabis sativa HOM05D004761 ORTHO05D005813 6.7e-11 70.9 62 56.5
BcaC04g21408 Brassica carinata HOM05D004761 ORTHO05D005813 8.8e-11 70.5 81 48.1
BolC9t56063H Brassica oleracea HOM05D004761 ORTHO05D005813 8.8e-11 70.5 81 48.1
Duzib248G0790 Durio zibethinus HOM05D004761 ORTHO05D005813 8.8e-11 70.5 83 54.2
Prupe.1G311800 Prunus persica HOM05D004761 ORTHO05D005813 8.8e-11 70.5 72 56.9
TWI31G0637 Tripterygium wilfordii HOM05D004761 ORTHO05D005813 8.8e-11 70.5 65 56.9
Cpa.g.sc1.34 Carica papaya HOM05D004761 ORTHO05D005813 1.1e-10 70.1 89 51.7
PGR119G1215 Punica granatum HOM05D004761 ORTHO05D005813 2.0e-10 69.3 73 53.4
TWI79G0635 Tripterygium wilfordii HOM05D004761 ORTHO05D005813 2.0e-10 69.3 64 56.2
Actinidia16656 Actinidia chinensis HOM05D004761 ORTHO05D005813 2.5e-10 68.9 88 47.7
ClCG05G022660 Citrullus lanatus HOM05D004761 ORTHO05D005813 2.5e-10 68.9 97 44.3
FAN07G1541 Fragaria x ananassa HOM05D004761 ORTHO05D005813 2.5e-10 68.9 64 59.4
Psat6g225000 Pisum sativum HOM05D004761 ORTHO05D005813 2.5e-10 68.9 83 50.6
Atru.chr11.97 Acer truncatum HOM05D004761 ORTHO05D005813 3.3e-10 68.6 74 50.0
arahy.Tifrunner.gnm1.ann1.B0KB7I Arachis hypogaea HOM05D004761 ORTHO05D005813 3.3e-10 68.6 58 62.1
AUR62002860 Chenopodium quinoa HOM05D004761 ORTHO05D005813 3.3e-10 68.6 71 53.5
Hund25060 Selenicereus undatus HOM05D004761 ORTHO05D005813 3.3e-10 68.6 84 51.2
CsaV3_5G034380 Cucumis sativus L. HOM05D004761 ORTHO05D005813 4.3e-10 68.2 71 52.1
Ah.03g137610 Amaranthus hybridus HOM05D004761 ORTHO05D005813 5.7e-10 67.8 76 48.7
C07p34980 Brassica napus HOM05D004761 ORTHO05D005813 5.7e-10 67.8 79 49.4
Ciclev10016274m.g Citrus clementina HOM05D004761 ORTHO05D005813 5.7e-10 67.8 86 50.0
Medtr1g110750 Medicago truncatula HOM05D004761 ORTHO05D005813 5.7e-10 67.8 83 49.4
Sp2g15160 Schrenkiella parvula HOM05D004761 ORTHO05D005813 5.7e-10 67.8 81 49.4
TPR.G18808 Trifolium pratense HOM05D004761 ORTHO05D000002 5.7e-10 67.8 83 48.2
Lj5g0002032 Lotus japonicus HOM05D004761 ORTHO05D005813 7.4e-10 67.4 87 48.3
MD16G1042300 Malus domestica HOM05D004761 ORTHO05D005813 7.4e-10 67.4 72 56.9
Thecc.02G229900 Theobroma cacao HOM05D004761 ORTHO05D005813 7.4e-10 67.4 78 52.6
arahy.Tifrunner.gnm1.ann1.BGN30W Arachis hypogaea HOM05D004761 ORTHO05D005813 1.3e-09 66.6 58 60.3
MD13G1041400 Malus domestica HOM05D004761 ORTHO05D005813 1.3e-09 66.6 72 55.6
arahy.Tifrunner.gnm1.ann1.8WFG9Z Arachis hypogaea HOM05D004761 ORTHO05D005813 2.2e-09 65.9 50 68.0
arahy.Tifrunner.gnm1.ann1.QJ0JEK Arachis hypogaea HOM05D004761 ORTHO05D005813 2.2e-09 65.9 50 68.0
ECA246G4195 Erigeron canadensis HOM05D004761 ORTHO05D005813 2.2e-09 65.9 44 70.5
Manes.14G102900 Manihot esculenta HOM05D004761 ORTHO05D005813 2.2e-09 65.9 84 47.6
HPP92_009407 Vanilla planifolia HOM05D004761 ORTHO05D005813 2.2e-09 65.9 57 59.6
HPP92_009433 Vanilla planifolia HOM05D004761 ORTHO05D005813 2.2e-09 65.9 57 59.6
Gohir.D11G344800 Gossypium hirsutum HOM05D004761 ORTHO05D005813 2.8e-09 65.5 65 52.3
Gorai.007G375200 Gossypium raimondii HOM05D004761 ORTHO05D005813 2.8e-09 65.5 65 52.3
Glyma.20G116100 Glycine max HOM05D004761 ORTHO05D005813 3.7e-09 65.1 62 54.8
Sed0020611 Sechium edule HOM05D004761 ORTHO05D005813 3.7e-09 65.1 61 54.1
MELO3C012254.2 Cucumis melo HOM05D004761 ORTHO05D005813 4.8e-09 64.7 71 53.5
FvH4_4g27310 Fragaria vesca HOM05D004761 ORTHO05D005813 4.8e-09 64.7 38 84.2
FAN12G1206 Fragaria x ananassa HOM05D004761 ORTHO05D005813 4.8e-09 64.7 38 84.2
FAN12G1874 Fragaria x ananassa HOM05D004761 ORTHO05D005813 4.8e-09 64.7 38 84.2
BcaC06g33937 Brassica carinata HOM05D004761 ORTHO05D005813 6.3e-09 64.3 79 50.6
BolC7t44030H Brassica oleracea HOM05D004761 ORTHO05D005813 6.3e-09 64.3 79 50.6
RcHm_v2.0_Chr4g0435111 Rosa chinensis HOM05D004761 ORTHO05D005813 6.3e-09 64.3 40 80.0
SEGI_01542 Sequoiadendron giganteum HOM05D004761 ORTHO05D005813 6.3e-09 64.3 56 58.9
vmacro10560 Vaccinium macrocarpon HOM05D004761 ORTHO05D005813 6.3e-09 64.3 43 76.7
A09p25090 Brassica napus HOM05D004761 ORTHO05D005813 8.2e-09 63.9 80 46.2
BraA09t38096Z Brassica rapa HOM05D004761 ORTHO05D005813 8.2e-09 63.9 80 46.2
Lalb_Chr02g0145941 Lupinus albus HOM05D004761 ORTHO05D005813 8.2e-09 63.9 37 83.8
PSO675G3483 Papaver somniferum HOM05D004761 ORTHO05D005813 8.2e-09 63.9 81 50.6
PSO717G0038 Papaver somniferum HOM05D004761 ORTHO05D005813 8.2e-09 63.9 81 50.6
Phvul.007G027600 Phaseolus vulgaris HOM05D004761 ORTHO05D005813 8.2e-09 63.9 37 83.8
A06p42360 Brassica napus HOM05D004761 ORTHO05D005813 1.1e-08 63.5 44 72.7
BraA06t27151Z Brassica rapa HOM05D004761 ORTHO05D005813 1.1e-08 63.5 44 72.7
Sabra08G0091800 Salix brachista HOM05D004761 ORTHO05D005813 1.1e-08 63.5 64 54.7
CARHR146910 Cardamine hirsuta HOM05D004761 ORTHO05D005813 1.4e-08 63.2 57 57.9
SMO203G0084 Selaginella moellendorffii HOM05D004761 ORTHO05D005813 1.4e-08 63.2 47 70.2
Lalb_Chr21g0308901 Lupinus albus HOM05D004761 ORTHO05D005813 1.8e-08 62.8 81 49.4
Potri.008G121100 Populus trichocarpa HOM05D004761 ORTHO05D005813 2.4e-08 62.4 66 53.0
Potri.010G124301 Populus trichocarpa HOM05D004761 ORTHO05D005813 2.4e-08 62.4 42 73.8
Sc11g0003470 Simmondsia chinensis HOM05D004761 ORTHO05D005813 2.4e-08 62.4 73 52.1
VMungo0720G0616 Vigna mungo HOM05D004761 ORTHO05D005813 2.4e-08 62.4 60 56.7
ATR0171G026 Amborella trichopoda HOM05D004761 ORTHO05D005813 3.1e-08 62.0 36 83.3
Rhsim09G0107700 Rhododendron simsii HOM05D004761 ORTHO05D005813 3.1e-08 62.0 64 56.2
THA.LOC104825698 Tarenaya hassleriana HOM05D004761 ORTHO05D005813 3.1e-08 62.0 70 52.9
Carub.0005s0378 Capsella rubella HOM05D004761 ORTHO05D005813 4.1e-08 61.6 76 47.4
Nn3g17852 Nelumbo nucifera HOM05D004761 ORTHO05D005813 5.3e-08 61.2 80 45.0
AT3G25920 Arabidopsis thaliana HOM05D004761 ORTHO05D005813 6.9e-08 60.8 71 49.3
Pp3c8_18220 Physcomitrium patens HOM05D004761 ORTHO05D005813 6.9e-08 60.8 60 55.0
AL5G14580 Arabidopsis lyrata HOM05D004761 ORTHO05D005813 1.2e-07 60.1 77 48.1
CDE05G0568 Ceratophyllum demersum HOM05D004761 ORTHO05D005813 1.5e-07 59.7 72 50.0
Zm00001eb008910 Zea mays HOM05D004761 ORTHO05D005813 2.0e-07 59.3 56 53.6
AagrBONN_evm.TU.Sc2ySwM_228.2844 Anthoceros agrestis HOM05D004761 ORTHO05D005813 3.4e-07 58.5 56 57.1
CDE05G1514 Ceratophyllum demersum HOM05D004761 ORTHO05D005813 3.4e-07 58.5 59 54.2
Hma1.2p1_0798F.1_g219870 Hydrangea macrophylla HOM05D004761 ORTHO05D005813 3.4e-07 58.5 55 58.2
Pp3c23_7670 Physcomitrium patens HOM05D004761 ORTHO05D005813 3.4e-07 58.5 47 68.1
Pp3c24_11450 Physcomitrium patens HOM05D004761 ORTHO05D005813 3.4e-07 58.5 65 50.8
Aa31LG2G6400 Aethionema arabicum HOM05D004761 ORTHO05D005813 4.5e-07 58.2 65 49.2
CBR_g6324 Chara braunii HOM05D004761 ORTHO05D005813 5.9e-07 57.8 62 51.6
Atru.chr2.2498 Acer truncatum HOM05D004761 ORTHO05D037944 7.7e-07 57.4 31 83.9
Pp3c20_9200 Physcomitrium patens HOM05D004761 ORTHO05D005813 7.7e-07 57.4 60 51.7
Mapoly0065s0007 Marchantia polymorpha HOM05D004761 ORTHO05D005813 1.0e-06 57.0 36 77.8
Os03g0219900 Oryza sativa ssp. japonica HOM05D004761 ORTHO05D005813 1.7e-06 56.2 62 48.4


User provided reference genes

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