Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu056487.1 Olea europaea HOM05D007384 ORTHO05D008511 1.7e-82 309.3 162 100.0
Oeu056489.1 Olea europaea HOM05D007384 ORTHO05D008511 1.6e-72 276.2 152 94.1
Oeu028527.1 Olea europaea HOM05D007384 ORTHO05D008511 3.7e-48 195.3 143 74.8
Oeu028376.1 Olea europaea HOM05D007384 ORTHO05D008511 3.8e-29 132.1 157 49.7
Oeu028378.1 Olea europaea HOM05D007384 ORTHO05D008511 5.0e-29 131.7 157 49.7
MSTRG.23314 Avicennia marina HOM05D007384 ORTHO05D008511 8.0e-27 124.4 154 46.8
Cc07_g16090 Coffea canephora HOM05D007384 ORTHO05D008511 3.3e-25 119.0 155 45.8
Dinv19495 Davidia involucrata HOM05D007384 ORTHO05D008511 3.5e-22 109.0 174 46.0
SGA_v2.0_scaffold47G17711 Striga asiatica HOM05D007384 ORTHO05D008511 4.5e-22 108.6 152 46.7
Dinv42700 Davidia involucrata HOM05D007384 ORTHO05D008511 5.5e-20 101.7 170 42.4
Peaxi162Scf00323g00037 Petunia axillaris HOM05D007384 ORTHO05D008511 9.4e-20 100.9 142 43.7
SalBow5G0260 Salvia bowleyana HOM05D007384 ORTHO05D008511 1.2e-19 100.5 155 45.2
SalBow5G4202 Salvia bowleyana HOM05D007384 ORTHO05D008511 1.2e-19 100.5 155 45.2
Solyc04g053145.1 Solanum lycopersicum HOM05D007384 ORTHO05D008511 1.0e-18 97.4 152 40.1
PGSC0003DMG400012958 Solanum tuberosum HOM05D007384 ORTHO05D008511 2.3e-18 96.3 153 41.8
SalBow6G3892 Salvia bowleyana HOM05D007384 ORTHO05D008511 1.5e-17 93.6 152 37.5
MSTRG.2538 Avicennia marina HOM05D007384 ORTHO05D008511 3.4e-17 92.4 152 39.5
Sopen04g023570 Solanum pennellii HOM05D007384 ORTHO05D008511 9.8e-17 90.9 152 38.2
TWI77G0698 Tripterygium wilfordii HOM05D007384 ORTHO05D008511 9.1e-15 84.3 161 37.9
Lsat_1_v5_gn_2_65360 Lactuca sativa HOM05D007384 ORTHO05D008511 3.5e-14 82.4 161 39.1
Duzib187G0804 Durio zibethinus HOM05D007384 ORTHO05D008511 7.7e-14 81.3 154 40.3
unitig_736.g22624 Utricularia gibba HOM05D007384 ORTHO05D008511 2.2e-13 79.7 153 34.0
Glyma.08G141200 Glycine max HOM05D007384 ORTHO05D008511 2.5e-12 76.3 159 36.5
Glyma.05G183400 Glycine max HOM05D007384 ORTHO05D008511 4.2e-12 75.5 155 35.5
VMungo0251G1085 Vigna mungo HOM05D007384 ORTHO05D008511 4.2e-12 75.5 155 37.4
HanXRQChr10g0295241 Helianthus annuus HOM05D007384 ORTHO05D008511 7.2e-12 74.7 149 37.6
Gorai.011G111700 Gossypium raimondii HOM05D007384 ORTHO05D008511 1.6e-11 73.6 163 36.2
Thecc.01G112100 Theobroma cacao HOM05D007384 ORTHO05D008511 2.7e-11 72.8 162 35.8
Duzib187G1860 Durio zibethinus HOM05D007384 ORTHO05D008511 3.6e-11 72.4 165 37.6
SGA_v2.0_scaffold2G01297 Striga asiatica HOM05D007384 ORTHO05D008511 1.0e-10 70.9 150 34.0
Gohir.A10G086700 Gossypium hirsutum HOM05D007384 ORTHO05D008511 1.4e-10 70.5 163 35.6
CiPaw.03G134700 Carya illinoinensis HOM05D007384 ORTHO05D008511 4.0e-10 68.9 168 35.1
Sabra05G0069000 Salix brachista HOM05D007384 ORTHO05D008511 4.0e-10 68.9 167 31.7
TAR628G0188 Trochodendron aralioides HOM05D007384 ORTHO05D008511 5.2e-10 68.6 170 34.1
TAR520G0001 Trochodendron aralioides HOM05D007384 ORTHO05D008511 6.8e-10 68.2 170 33.5
CARHR278890 Cardamine hirsuta HOM05D012887 ORTHO05D008511 1.2e-09 67.4 160 34.4
Migut.L00076 Erythranthe guttata HOM05D007384 ORTHO05D008511 1.5e-09 67.0 141 37.6
DCAR_001367 Daucus carota HOM05D007384 ORTHO05D008511 2.0e-09 66.6 153 32.7
TPR.G40723 Trifolium pratense HOM05D007384 ORTHO05D008511 2.0e-09 66.6 147 39.5
Hund19659 Selenicereus undatus HOM05D007384 ORTHO05D008511 7.5e-09 64.7 147 33.3
Potri.005G083900 Populus trichocarpa HOM05D007384 ORTHO05D008511 9.8e-09 64.3 169 33.1
AT5G64880 Arabidopsis thaliana HOM05D012887 ORTHO05D008511 1.7e-08 63.5 161 34.8
FvH4_1g22200 Fragaria vesca HOM05D007384 ORTHO05D008511 2.2e-08 63.2 156 34.0
FAN19G0612 Fragaria x ananassa HOM05D007384 ORTHO05D008511 2.2e-08 63.2 156 33.3
Manes.13G077680 Manihot esculenta HOM05D007384 ORTHO05D008511 2.2e-08 63.2 170 34.1
FAN23G2853 Fragaria x ananassa HOM05D007384 ORTHO05D008511 2.8e-08 62.8 156 33.3
Sed0027168 Sechium edule HOM05D007384 ORTHO05D008511 6.3e-08 61.6 168 32.7
Rhsim10G0013800 Rhododendron simsii HOM05D007384 ORTHO05D008511 8.3e-08 61.2 157 35.7
Hund03542 Selenicereus undatus HOM05D007384 ORTHO05D008511 1.4e-07 60.5 147 35.4
Lj4g0022190 Lotus japonicus HOM05D007384 ORTHO05D008511 1.8e-07 60.1 151 33.1
Lj4g0025402 Lotus japonicus HOM05D007384 ORTHO05D008511 1.8e-07 60.1 151 33.1
Nitab4.5_0000471g0140 Nicotiana tabacum HOM05D007384 ORTHO05D008511 1.8e-07 60.1 157 31.8
EL10Ac6g14748 Beta vulgaris HOM05D007384 ORTHO05D008511 3.1e-07 59.3 147 33.3
Gorai.003G046900 Gossypium raimondii HOM05D007384 ORTHO05D008511 3.1e-07 59.3 141 35.5
CsaV3_2G017570 Cucumis sativus L. HOM05D007384 ORTHO05D008511 4.1e-07 58.9 159 31.4
Potri.007G081700 Populus trichocarpa HOM05D007384 ORTHO05D008511 4.1e-07 58.9 153 35.3
Sc07g0001520 Simmondsia chinensis HOM05D007384 ORTHO05D008511 9.2e-07 57.8 139 33.8
CSS0019294 Camellia sinensis var. sinensis HOM05D007384 ORTHO05D008511 1.2e-06 57.4 87 41.4
ECA238G3631 Erigeron canadensis HOM05D007384 ORTHO05D008511 1.2e-06 57.4 116 37.1
FAN26G2489 Fragaria x ananassa HOM05D007384 ORTHO05D008511 2.0e-06 56.6 156 32.7
RcHm_v2.0_Chr2g0116341 Rosa chinensis HOM05D007384 ORTHO05D008511 2.0e-06 56.6 154 33.1
AL8G42370 Arabidopsis lyrata HOM05D012887 ORTHO05D008511 2.7e-06 56.2 161 32.3
QL06p032302 Quercus lobata HOM05D007384 ORTHO05D008511 2.7e-06 56.2 72 54.2
MD01G1019000 Malus domestica HOM05D007384 ORTHO05D008511 3.5e-06 55.8 161 31.7
CANSAT01G1949 Cannabis sativa HOM05D007384 ORTHO05D008511 5.9e-06 55.1 166 31.9
Lj1g0001463 Lotus japonicus HOM05D007384 ORTHO05D008511 7.7e-06 54.7 160 33.8


User provided reference genes

Program Settings