Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu056423.1 Olea europaea HOM05D003029 ORTHO05D003413 6.4e-174 614.0 311 100.0
Oeu049048.2 Olea europaea HOM05D003029 ORTHO05D003413 3.4e-42 176.4 437 33.4
MSTRG.4243 Avicennia marina HOM05D003029 ORTHO05D003413 6.2e-36 155.6 414 31.6
SalBow3G0925 Salvia bowleyana HOM05D003029 ORTHO05D003413 2.9e-33 146.7 435 30.8
MSTRG.9800 Avicennia marina HOM05D003029 ORTHO05D003413 4.3e-29 132.9 433 29.1
Oeu043441.1 Olea europaea HOM05D003029 ORTHO05D003413 7.3e-29 132.1 462 28.1
CSS0049755 Camellia sinensis var. sinensis HOM05D003029 ORTHO05D003413 9.9e-26 121.7 441 27.0
Cc03_g08440 Coffea canephora HOM05D003029 ORTHO05D003413 2.2e-25 120.6 441 25.6
SGA_v2.0_scaffold270G46323 Striga asiatica HOM05D003029 ORTHO05D003413 1.1e-24 118.2 398 30.9
Thecc.04G195700 Theobroma cacao HOM05D003029 ORTHO05D003413 7.9e-23 112.1 387 28.7
Migut.G00757 Erythranthe guttata HOM05D003029 ORTHO05D003413 1.3e-22 111.3 433 29.6
Nitab4.5_0006920g0010 Nicotiana tabacum HOM05D003029 ORTHO05D003413 1.5e-21 107.8 390 31.0
SalBow8G5155 Salvia bowleyana HOM05D003029 ORTHO05D003413 4.3e-21 106.3 472 25.0
GSVIVG01021020001 Vitis vinifera HOM05D003029 ORTHO05D003413 4.3e-21 106.3 386 27.7
Nitab4.5_0002260g0050 Nicotiana tabacum HOM05D003029 ORTHO05D003413 5.6e-21 105.9 390 31.3
Sabra16G0202400 Salix brachista HOM05D003029 ORTHO05D003413 5.6e-21 105.9 422 28.0
Oeu034324.1 Olea europaea HOM05D003029 ORTHO05D003413 7.3e-21 105.5 107 53.3
unitig_8.g3407 Utricularia gibba HOM05D003029 ORTHO05D003413 1.6e-20 104.4 417 25.2
Peaxi162Scf00423g00411 Petunia axillaris HOM05D003029 ORTHO05D003413 2.8e-20 103.6 431 28.5
Sabra16G0202200 Salix brachista HOM05D003029 ORTHO05D003413 8.1e-20 102.1 415 27.0
Atru.chr4.1590 Acer truncatum HOM05D003029 ORTHO05D003413 1.1e-19 101.7 406 27.6
Glyma.11G255200 Glycine max HOM05D003029 ORTHO05D003413 1.1e-19 101.7 424 25.2
COL.COLO4_20221 Corchorus olitorius HOM05D003029 ORTHO05D003413 2.4e-19 100.5 456 26.1
Duzib151G1197 Durio zibethinus HOM05D003029 ORTHO05D003413 2.4e-19 100.5 415 28.9
Actinidia21255 Actinidia chinensis HOM05D003029 ORTHO05D003413 4.0e-19 99.8 420 27.4
Duzib212G0885 Durio zibethinus HOM05D003029 ORTHO05D003413 4.0e-19 99.8 384 27.9
Glyma.18G001900 Glycine max HOM05D003029 ORTHO05D003413 4.0e-19 99.8 415 24.8
Actinidia21254 Actinidia chinensis HOM05D003029 ORTHO05D003413 5.3e-19 99.4 418 28.2
Potri.017G058500 Populus trichocarpa HOM05D003029 ORTHO05D003413 6.9e-19 99.0 402 27.1
Gohir.D02G022800 Gossypium hirsutum HOM05D003029 ORTHO05D003413 1.2e-18 98.2 398 28.6
Cfa014958 Carpinus fangiana HOM05D003029 ORTHO05D003413 1.5e-18 97.8 378 27.8
Haze_11649 Corylus avellana HOM05D003029 ORTHO05D003413 1.5e-18 97.8 377 28.1
Duzib268G0331 Durio zibethinus HOM05D003029 ORTHO05D003413 2.0e-18 97.4 419 25.8
DCAR_026643 Daucus carota HOM05D003029 ORTHO05D003413 7.6e-18 95.5 408 27.0
Cpa.g.sc157.52 Carica papaya HOM05D003029 ORTHO05D003413 1.3e-17 94.7 277 30.7
Gorai.005G028200 Gossypium raimondii HOM05D003029 ORTHO05D003413 1.3e-17 94.7 418 27.5
TAR362G1056 Trochodendron aralioides HOM05D003029 ORTHO05D003413 1.3e-17 94.7 393 28.5
CiPaw.02G064700 Carya illinoinensis HOM05D003029 ORTHO05D003413 2.2e-17 94.0 396 27.0
Gohir.A10G127900 Gossypium hirsutum HOM05D003029 ORTHO05D003413 8.4e-17 92.0 378 27.2
Actinidia35843 Actinidia chinensis HOM05D003029 ORTHO05D003413 1.9e-16 90.9 419 26.7
Nitab4.5_0000676g0030 Nicotiana tabacum HOM05D003029 ORTHO05D003413 4.2e-16 89.7 440 27.3
Dinv27203 Davidia involucrata HOM05D003029 ORTHO05D003413 5.5e-16 89.4 134 43.3
Actinidia11454 Actinidia chinensis HOM05D003029 ORTHO05D003413 7.1e-16 89.0 462 26.2
Ca_17981_v3 Cicer arietinum L. HOM05D003029 ORTHO05D003413 7.1e-16 89.0 331 28.7
CiPaw.01G117300 Carya illinoinensis HOM05D003029 ORTHO05D003413 9.3e-16 88.6 400 26.0
Gohir.A02G019500 Gossypium hirsutum HOM05D003029 ORTHO05D003413 2.1e-15 87.4 390 27.7
Rhsim02G0061600 Rhododendron simsii HOM05D003029 ORTHO05D003413 2.7e-15 87.0 444 25.2
FvH4_4g13340 Fragaria vesca HOM05D003029 ORTHO05D003413 6.0e-15 85.9 187 36.9
FAN12G1114 Fragaria x ananassa HOM05D003029 ORTHO05D003413 6.0e-15 85.9 187 36.9
FAN22G0425 Fragaria x ananassa HOM05D003029 ORTHO05D003413 7.9e-15 85.5 187 36.9
Manes.03G144600 Manihot esculenta HOM05D003029 ORTHO05D003413 7.9e-15 85.5 74 60.8
BolC1t05561H Brassica oleracea HOM05D003029 ORTHO05D003413 1.0e-14 85.1 387 27.4
FAN07G2221 Fragaria x ananassa HOM05D003029 ORTHO05D003413 1.3e-14 84.7 186 37.1
BcaB04g21298 Brassica carinata HOM05D003029 ORTHO05D003413 1.8e-14 84.3 361 27.1
Gorai.006G223500 Gossypium raimondii HOM05D003029 ORTHO05D003413 1.5e-13 81.3 75 57.3
Prupe.8G196300 Prunus persica HOM05D003029 ORTHO05D003413 1.5e-13 81.3 74 58.1
FAN17G0226 Fragaria x ananassa HOM05D003029 ORTHO05D003413 1.9e-13 80.9 73 56.2
Gohir.D10G138100 Gossypium hirsutum HOM05D003029 ORTHO05D003413 1.9e-13 80.9 74 54.1
Gorai.011G153200 Gossypium raimondii HOM05D003029 ORTHO05D003413 1.9e-13 80.9 74 54.1
QL06p026140 Quercus lobata HOM05D003029 ORTHO05D003413 2.5e-13 80.5 452 23.7
Nitab4.5_0000850g0180 Nicotiana tabacum HOM05D003029 ORTHO05D003413 3.3e-13 80.1 435 26.2
Dinv38178 Davidia involucrata HOM05D003029 ORTHO05D003413 4.3e-13 79.7 116 43.1
Nitab4.5_0006920g0030 Nicotiana tabacum HOM05D003029 ORTHO05D003413 4.3e-13 79.7 152 37.5
arahy.Tifrunner.gnm1.ann1.AU34HA Arachis hypogaea HOM05D003029 ORTHO05D003413 5.6e-13 79.3 74 52.7
arahy.Tifrunner.gnm1.ann1.R3AU9F Arachis hypogaea HOM05D003029 ORTHO05D003413 5.6e-13 79.3 74 51.4
MD04G1017100 Malus domestica HOM05D003029 ORTHO05D003413 7.4e-13 79.0 412 25.0
Dinv14526 Davidia involucrata HOM05D003029 ORTHO05D003413 9.6e-13 78.6 73 56.2
Gohir.D09G199800 Gossypium hirsutum HOM05D003029 ORTHO05D003413 9.6e-13 78.6 75 56.0
Hma1.2p1_0349F.1_g132190 Hydrangea macrophylla HOM05D003029 ORTHO05D003413 9.6e-13 78.6 392 26.8
Prupe.1G164200 Prunus persica HOM05D003029 ORTHO05D003413 9.6e-13 78.6 433 24.2
TWI36G1114 Tripterygium wilfordii HOM05D003029 ORTHO05D003413 9.6e-13 78.6 285 30.9
TPR.G11807 Trifolium pratense HOM05D003029 ORTHO05D003413 1.3e-12 78.2 73 56.2
MD04G1017000 Malus domestica HOM05D003029 ORTHO05D003413 1.6e-12 77.8 396 23.7
GSVIVG01004954001 Vitis vinifera HOM05D003029 ORTHO05D003413 1.6e-12 77.8 74 55.4
Sed0025519 Sechium edule HOM05D003029 ORTHO05D003413 2.1e-12 77.4 424 25.9
TAR636G0249 Trochodendron aralioides HOM05D003029 ORTHO05D003413 2.1e-12 77.4 74 56.8
Ah.13g077980 Amaranthus hybridus HOM05D003029 ORTHO05D003413 2.8e-12 77.0 74 48.6
Ciclev10005071m.g Citrus clementina HOM05D003029 ORTHO05D003413 2.8e-12 77.0 74 54.1
CsaV3_2G011760 Cucumis sativus L. HOM05D003029 ORTHO05D003413 3.7e-12 76.6 74 52.7
Sabra17G0052100 Salix brachista HOM05D003029 ORTHO05D003413 3.7e-12 76.6 113 45.1
AUR62020859 Chenopodium quinoa HOM05D003029 ORTHO05D003413 4.8e-12 76.3 74 50.0
Sed0005118 Sechium edule HOM05D003029 ORTHO05D003413 6.2e-12 75.9 74 54.1
DCAR_012677 Daucus carota HOM05D003029 ORTHO05D003413 8.1e-12 75.5 73 53.4
SalBow6G0319 Salvia bowleyana HOM05D003029 ORTHO05D003413 8.1e-12 75.5 73 50.7
SalBow6G1280 Salvia bowleyana HOM05D003029 ORTHO05D003413 8.1e-12 75.5 73 50.7
MBI07_g27661_MAGBIO Magnolia biondii HOM05D003029 ORTHO05D003413 1.1e-11 75.1 160 36.9
RcHm_v2.0_Chr4g0413691 Rosa chinensis HOM05D003029 ORTHO05D003413 1.1e-11 75.1 75 53.3
ClCG06G007970 Citrullus lanatus HOM05D003029 ORTHO05D003413 1.4e-11 74.7 74 52.7
Sp3g06230 Schrenkiella parvula HOM05D003029 ORTHO05D003413 1.4e-11 74.7 404 27.5
Potri.017G058600 Populus trichocarpa HOM05D003029 ORTHO05D003413 2.4e-11 73.9 74 51.4
TWI18G0251 Tripterygium wilfordii HOM05D003029 ORTHO05D003413 2.4e-11 73.9 310 28.4
CAN.G767.12 Capsicum annuum HOM05D003029 ORTHO05D003413 3.1e-11 73.6 468 26.5
Lj2C1122G5 Lonicera japonica HOM05D003029 ORTHO05D003413 3.1e-11 73.6 74 52.7
AUR62018560 Chenopodium quinoa HOM05D003029 ORTHO05D003413 4.0e-11 73.2 74 47.3
MELO3C020427.2 Cucumis melo HOM05D003029 ORTHO05D003413 4.0e-11 73.2 74 50.0
CAN.G765.36 Capsicum annuum HOM05D003029 ORTHO05D003413 5.3e-11 72.8 146 39.7
Cc01_g16520 Coffea canephora HOM05D003029 ORTHO05D003413 5.3e-11 72.8 73 46.6
Sabra17G0052200 Salix brachista HOM05D003029 ORTHO05D003413 6.9e-11 72.4 74 52.7
Medtr8g081570 Medicago truncatula HOM05D003029 ORTHO05D003413 9.0e-11 72.0 73 47.9
Ah.04g149350 Amaranthus hybridus HOM05D003029 ORTHO05D003413 1.2e-10 71.6 96 39.6
PGR083G2864 Punica granatum HOM05D003029 ORTHO05D003413 1.2e-10 71.6 79 51.9
Glyma.05G152400 Glycine max HOM05D003029 ORTHO05D003413 1.5e-10 71.2 432 22.2
PSO017G1724 Papaver somniferum HOM05D003029 ORTHO05D003413 1.5e-10 71.2 73 47.9
TAR633G2732 Trochodendron aralioides HOM05D003029 ORTHO05D003413 1.5e-10 71.2 120 43.3
Haze_03354 Corylus avellana HOM05D003029 ORTHO05D003413 2.0e-10 70.9 74 48.6
Psat7g075040 Pisum sativum HOM05D003029 ORTHO05D003413 2.0e-10 70.9 73 47.9
Sopen12g033250 Solanum pennellii HOM05D003029 ORTHO05D003413 2.0e-10 70.9 74 54.1
VMungo0251G2529 Vigna mungo HOM05D003029 ORTHO05D003413 2.0e-10 70.9 74 51.4
Actinidia23384 Actinidia chinensis HOM05D003029 ORTHO05D003413 2.6e-10 70.5 74 50.0
Solyc12g098463.1 Solanum lycopersicum HOM05D003029 ORTHO05D003413 2.6e-10 70.5 74 54.1
TWI75G0963 Tripterygium wilfordii HOM05D003029 ORTHO05D003413 2.6e-10 70.5 73 52.1
Nn3g20075 Nelumbo nucifera HOM05D003029 ORTHO05D003413 3.4e-10 70.1 74 54.1
PSO063G2363 Papaver somniferum HOM05D003029 ORTHO05D003413 4.5e-10 69.7 73 47.9
Sopen05g032240 Solanum pennellii HOM05D003029 ORTHO05D003413 4.5e-10 69.7 74 51.4
PGSC0003DMG400015747 Solanum tuberosum HOM05D003029 ORTHO05D003413 4.5e-10 69.7 74 51.4
BraA03t12696Z Brassica rapa HOM05D003029 ORTHO05D003413 5.8e-10 69.3 349 26.1
Solyc05g053770.4 Solanum lycopersicum HOM05D003029 ORTHO05D003413 5.8e-10 69.3 74 51.4
Phvul.003G050800 Phaseolus vulgaris HOM05D003029 ORTHO05D003413 7.6e-10 68.9 74 48.6
Sc13g0000380 Simmondsia chinensis HOM05D003029 ORTHO05D003413 7.6e-10 68.9 74 48.6
Lj4g0000581 Lotus japonicus HOM05D003029 ORTHO05D003413 1.0e-09 68.6 104 43.3
MD13G1282000 Malus domestica HOM05D003029 ORTHO05D003413 1.0e-09 68.6 408 24.3
TAR365G0314 Trochodendron aralioides HOM05D003029 ORTHO05D003413 1.0e-09 68.6 155 34.2
Manes.12G049400 Manihot esculenta HOM05D003029 ORTHO05D003413 1.3e-09 68.2 74 47.3
CiPaw.14G040000 Carya illinoinensis HOM05D003029 ORTHO05D003413 1.7e-09 67.8 78 50.0
Lsat_1_v5_gn_1_70641 Lactuca sativa HOM05D003029 ORTHO05D003413 1.7e-09 67.8 74 51.4
CDE05G0723 Ceratophyllum demersum HOM05D003029 ORTHO05D003413 2.9e-09 67.0 74 48.6
EL10Ac3g07458 Beta vulgaris HOM05D003029 ORTHO05D003413 3.8e-09 66.6 74 41.9
A03p35170 Brassica napus HOM05D003029 ORTHO05D003413 3.8e-09 66.6 349 26.1
Glyma.08G110100 Glycine max HOM05D003029 ORTHO05D003413 3.8e-09 66.6 75 49.3
Aqoxy2G03937 Aquilegia oxysepala HOM05D003029 ORTHO05D003413 4.9e-09 66.2 74 50.0
Phvul.003G050700 Phaseolus vulgaris HOM05D003029 ORTHO05D003413 4.9e-09 66.2 76 46.1
C05p60010 Brassica napus HOM05D003029 ORTHO05D003413 6.5e-09 65.9 331 26.3
Atru.chr6.1447 Acer truncatum HOM05D003029 ORTHO05D003413 1.1e-08 65.1 74 48.6
ECA248G1735 Erigeron canadensis HOM05D003029 ORTHO05D003413 1.1e-08 65.1 86 44.2
Lalb_Chr23g0278361 Lupinus albus HOM05D003029 ORTHO05D003413 1.1e-08 65.1 75 49.3
TWI36G0576 Tripterygium wilfordii HOM05D003029 ORTHO05D003413 1.1e-08 65.1 306 29.4
Actinidia28994 Actinidia chinensis HOM05D003029 ORTHO05D003413 1.4e-08 64.7 132 35.6
C07p39290 Brassica napus HOM05D003029 ORTHO05D003413 1.4e-08 64.7 372 26.9
BolC7t44449H Brassica oleracea HOM05D003029 ORTHO05D003413 1.4e-08 64.7 372 26.9
HanXRQChr01g0022171 Helianthus annuus HOM05D003029 ORTHO05D003413 1.4e-08 64.7 90 43.3
SGA_v2.0_scaffold156G37278 Striga asiatica HOM05D003029 ORTHO05D003413 1.9e-08 64.3 73 47.9
C03p42770 Brassica napus HOM05D003029 ORTHO05D003413 2.5e-08 63.9 348 27.0
BolC3t16546H Brassica oleracea HOM05D003029 ORTHO05D003413 2.5e-08 63.9 348 27.0
Nn3g20072 Nelumbo nucifera HOM05D003029 ORTHO05D003413 3.2e-08 63.5 74 51.4
Rhsim13G0050000 Rhododendron simsii HOM05D003029 ORTHO05D003413 3.2e-08 63.5 76 46.1
ATR0561G140 Amborella trichopoda HOM05D003029 ORTHO05D003413 5.5e-08 62.8 73 42.5
DCAR_004743 Daucus carota HOM05D003029 ORTHO05D003413 5.5e-08 62.8 73 43.8
THA.LOC104822483 Tarenaya hassleriana HOM05D003029 ORTHO05D003413 5.5e-08 62.8 74 47.3
Thhalv10020618m.g Eutrema salsugineum HOM05D003029 ORTHO05D003413 7.1e-08 62.4 404 24.3
Lalb_Chr13g0294851 Lupinus albus HOM05D003029 ORTHO05D003413 7.1e-08 62.4 454 22.9
vmacro02792 Vaccinium macrocarpon HOM05D003029 ORTHO05D003413 7.1e-08 62.4 74 48.6
BcaC05g29857 Brassica carinata HOM05D003029 ORTHO05D003413 9.3e-08 62.0 317 27.1
BNapus_Darmor_BZH_scaffold_109p00150 Brassica napus HOM05D003029 ORTHO05D003413 9.3e-08 62.0 332 25.3
CSS0036198 Camellia sinensis var. sinensis HOM05D003029 ORTHO05D003413 9.3e-08 62.0 74 48.6
Migut.D02515 Erythranthe guttata HOM05D003029 ORTHO05D003413 9.3e-08 62.0 73 45.2
MBI07_g16779_MAGBIO Magnolia biondii HOM05D003029 ORTHO05D003413 9.3e-08 62.0 146 34.9
VMungo0251G3135 Vigna mungo HOM05D003029 ORTHO05D003413 9.3e-08 62.0 73 39.7
BcaC05g29734 Brassica carinata HOM05D003029 ORTHO05D003413 1.2e-07 61.6 340 26.2
Hund19006 Selenicereus undatus HOM05D003029 ORTHO05D003413 1.6e-07 61.2 76 39.5
Lalb_Chr12g0205611 Lupinus albus HOM05D003029 ORTHO05D003413 2.1e-07 60.8 214 27.6
Sc05g0001900 Simmondsia chinensis HOM05D003029 ORTHO05D003413 2.1e-07 60.8 76 43.4
HanXRQChr11g0344321 Helianthus annuus HOM05D003029 ORTHO05D003413 2.7e-07 60.5 75 48.0
Manes.13G051200 Manihot esculenta HOM05D003029 ORTHO05D003413 2.7e-07 60.5 377 23.1
A06p39050 Brassica napus HOM05D003029 ORTHO05D003413 3.5e-07 60.1 380 26.1
Thhalv10004154m.g Eutrema salsugineum HOM05D003029 ORTHO05D003413 3.5e-07 60.1 360 25.8
BcaC06g30775 Brassica carinata HOM05D003029 ORTHO05D003413 4.6e-07 59.7 391 25.6
BraA01t04389Z Brassica rapa HOM05D003029 ORTHO05D003413 4.6e-07 59.7 375 26.7
Oeu057857.3 Olea europaea HOM05D003029 ORTHO05D003413 6.0e-07 59.3 67 38.8
A05p40910 Brassica napus HOM05D003029 ORTHO05D003413 1.3e-06 58.2 320 25.9
BraA05t22820Z Brassica rapa HOM05D003029 ORTHO05D003413 1.3e-06 58.2 320 25.9
HPP92_006969 Vanilla planifolia HOM05D003029 ORTHO05D003413 1.3e-06 58.2 155 29.7
Zm00001eb210840 Zea mays HOM05D003029 ORTHO05D003413 1.3e-06 58.2 82 37.8
ClCG05G003130 Citrullus lanatus HOM05D003029 ORTHO05D003413 1.8e-06 57.8 166 29.5
Sp3g06210 Schrenkiella parvula HOM05D003029 ORTHO05D003413 2.3e-06 57.4 415 26.5
HPP92_025250 Vanilla planifolia HOM05D003029 ORTHO05D003413 3.0e-06 57.0 273 24.9
AL625U10010 Arabidopsis lyrata HOM05D003029 ORTHO05D003413 3.9e-06 56.6 260 26.5
CARHR292000 Cardamine hirsuta HOM05D003029 ORTHO05D003413 5.1e-06 56.2 77 41.6
Rhsim09G0059700 Rhododendron simsii HOM05D003029 ORTHO05D003413 5.1e-06 56.2 67 50.7
unitig_22.g6828 Utricularia gibba HOM05D003029 ORTHO05D003413 5.1e-06 56.2 397 21.4
BraA06t26818Z Brassica rapa HOM05D003029 ORTHO05D003413 6.7e-06 55.8 80 42.5
Solyc12g098467.1 Solanum lycopersicum HOM05D003029 ORTHO05D003413 6.7e-06 55.8 147 37.4
AT5G43490 Arabidopsis thaliana HOM05D003029 ORTHO05D003413 8.7e-06 55.5 75 41.3
Lalb_Chr07g0186821 Lupinus albus HOM05D003029 ORTHO05D003413 8.7e-06 55.5 454 21.6


User provided reference genes

Program Settings