Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu056332.1 Olea europaea HOM05D003932 ORTHO05D004546 4.0e-96 354.8 178 100.0
Oeu053298.1 Olea europaea HOM05D003932 ORTHO05D004546 1.3e-51 206.8 184 63.0
MSTRG.28209 Avicennia marina HOM05D003932 ORTHO05D004546 3.7e-33 145.6 167 47.9
Migut.N01424 Erythranthe guttata HOM05D003932 ORTHO05D004546 3.7e-33 145.6 160 51.9
SalBow5G4627 Salvia bowleyana HOM05D003932 ORTHO05D004546 2.6e-31 139.4 180 45.6
SalBow5G0579 Salvia bowleyana HOM05D003932 ORTHO05D004546 4.5e-31 138.7 178 45.5
MSTRG.28210 Avicennia marina HOM05D003932 ORTHO05D004546 1.9e-29 133.3 167 43.1
Dinv32438 Davidia involucrata HOM05D003932 ORTHO05D004546 1.0e-27 127.5 166 42.8
Cfa004206 Carpinus fangiana HOM05D003932 ORTHO05D004546 3.9e-27 125.6 170 40.0
SGA_v2.0_scaffold11G05654 Striga asiatica HOM05D003932 ORTHO05D004546 5.1e-27 125.2 181 40.9
Cfa004205 Carpinus fangiana HOM05D003932 ORTHO05D004546 4.3e-26 122.1 183 40.4
Peaxi162Scf00021g01219 Petunia axillaris HOM05D003932 ORTHO05D004546 1.7e-25 120.2 179 43.6
Hma1.2p1_0001F.1_g001770 Hydrangea macrophylla HOM05D003932 ORTHO05D004546 1.1e-24 117.5 178 39.3
Haze_15204 Corylus avellana HOM05D003932 ORTHO05D004546 2.4e-24 116.3 170 38.8
Manes.05G038300 Manihot esculenta HOM05D003932 ORTHO05D004546 2.0e-23 113.2 175 39.4
RcHm_v2.0_Chr1g0352831 Rosa chinensis HOM05D003932 ORTHO05D004546 3.4e-23 112.5 163 40.5
RcHm_v2.0_Chr1g0352841 Rosa chinensis HOM05D003932 ORTHO05D004546 4.5e-23 112.1 163 38.0
CAN.G170.13 Capsicum annuum HOM05D003932 ORTHO05D004546 1.3e-22 110.5 168 39.9
FvH4_7g13460 Fragaria vesca HOM05D003932 ORTHO05D004546 1.7e-22 110.2 173 37.6
Nitab4.5_0006421g0030 Nicotiana tabacum HOM05D003932 ORTHO05D004546 2.9e-22 109.4 171 37.4
Sopen01g037320 Solanum pennellii HOM05D003932 ORTHO05D004546 3.8e-22 109.0 165 41.2
FAN06G3956 Fragaria x ananassa HOM05D003932 ORTHO05D004546 6.5e-22 108.2 173 37.0
Solyc01g091550.3 Solanum lycopersicum HOM05D003932 ORTHO05D004546 6.5e-22 108.2 165 40.6
Lj9A578T66 Lonicera japonica HOM05D003932 ORTHO05D004546 8.5e-22 107.8 167 40.1
FAN10G1165 Fragaria x ananassa HOM05D003932 ORTHO05D004546 1.1e-21 107.5 173 37.6
FAN01G1053 Fragaria x ananassa HOM05D003932 ORTHO05D004546 1.4e-21 107.1 173 37.0
Peaxi162Scf00021g01218 Petunia axillaris HOM05D003932 ORTHO05D004546 1.9e-21 106.7 182 37.9
FAN06G0832 Fragaria x ananassa HOM05D003932 ORTHO05D004546 4.2e-21 105.5 173 36.4
DCAR_020430 Daucus carota HOM05D003932 ORTHO05D004546 5.5e-21 105.1 169 41.4
Eucgr.E00193 Eucalyptus grandis HOM05D003932 ORTHO05D004546 5.5e-21 105.1 162 37.0
Sopen01g037330 Solanum pennellii HOM05D003932 ORTHO05D004546 5.5e-21 105.1 166 41.0
Potri.014G078900 Populus trichocarpa HOM05D003932 ORTHO05D004546 9.4e-21 104.4 167 37.1
Solyc01g091560.2 Solanum lycopersicum HOM05D003932 ORTHO05D004546 1.2e-20 104.0 166 40.4
ECA236G1648 Erigeron canadensis HOM05D003932 ORTHO05D004546 2.1e-20 103.2 168 36.9
FAN10G0548 Fragaria x ananassa HOM05D003932 ORTHO05D004546 4.7e-20 102.1 175 36.0
PGSC0003DMG400027783 Solanum tuberosum HOM05D003932 ORTHO05D004546 7.9e-20 101.3 166 38.6
FvH4_7g13461 Fragaria vesca HOM05D003932 ORTHO05D004546 1.0e-19 100.9 175 36.0
PGSC0003DMG400027784 Solanum tuberosum HOM05D003932 ORTHO05D004546 1.4e-19 100.5 165 37.6
GSVIVG01027495001 Vitis vinifera HOM05D003932 ORTHO05D004546 1.4e-19 100.5 163 37.4
SalBow5G2663 Salvia bowleyana HOM05D003932 ORTHO05D004546 1.8e-19 100.1 170 34.1
SalBow5G3861 Salvia bowleyana HOM05D003932 ORTHO05D004546 1.8e-19 100.1 170 34.1
Duzib133G0425 Durio zibethinus HOM05D003932 ORTHO05D004546 3.0e-19 99.4 167 35.3
Cfa004207 Carpinus fangiana HOM05D003932 ORTHO05D004546 3.9e-19 99.0 162 35.8
Lsat_1_v5_gn_7_5520 Lactuca sativa HOM05D003932 ORTHO05D004546 5.1e-19 98.6 164 35.4
TWI59G0559 Tripterygium wilfordii HOM05D003932 ORTHO05D004546 5.1e-19 98.6 169 36.7
CANSAT56G2307 Cannabis sativa HOM05D003932 ORTHO05D004546 8.8e-19 97.8 169 33.7
FAN06G4428 Fragaria x ananassa HOM05D003932 ORTHO05D004546 1.5e-18 97.1 175 34.9
MD07G1126000 Malus domestica HOM05D003932 ORTHO05D004546 4.4e-18 95.5 168 33.9
Sabra14G0057100 Salix brachista HOM05D003932 ORTHO05D004546 7.4e-18 94.7 180 35.0
TWI14G0637 Tripterygium wilfordii HOM05D003932 ORTHO05D004546 7.4e-18 94.7 167 34.1
Haze_15203 Corylus avellana HOM05D003932 ORTHO05D004546 9.7e-18 94.4 162 34.6
FAN01G0068 Fragaria x ananassa HOM05D003932 ORTHO05D004546 1.3e-17 94.0 175 34.3
Manes.05G038600 Manihot esculenta HOM05D003932 ORTHO05D004546 1.7e-17 93.6 167 37.1
Gohir.A11G086400 Gossypium hirsutum HOM05D003932 ORTHO05D004546 2.2e-17 93.2 149 36.2
unitig_22.g6806 Utricularia gibba HOM05D003932 ORTHO05D004546 2.2e-17 93.2 152 38.2
Actinidia33434 Actinidia chinensis HOM05D003932 ORTHO05D004546 2.8e-17 92.8 157 39.5
Atru.chr5.429 Acer truncatum HOM05D003932 ORTHO05D004546 3.7e-17 92.4 167 29.9
Lsat_1_v5_gn_7_5540 Lactuca sativa HOM05D003932 ORTHO05D004546 3.7e-17 92.4 161 34.8
GSVIVG01027494001 Vitis vinifera HOM05D003932 ORTHO05D004546 3.7e-17 92.4 166 33.7
Cc00_g12140 Coffea canephora HOM05D003932 ORTHO05D004546 4.8e-17 92.0 139 43.9
Potri.002G155500 Populus trichocarpa HOM05D003932 ORTHO05D004546 8.2e-17 91.3 167 34.1
Atru.chr5.432 Acer truncatum HOM05D003932 ORTHO05D004546 1.1e-16 90.9 162 33.3
Ciclev10022587m.g Citrus clementina HOM05D003932 ORTHO05D004546 1.4e-16 90.5 161 34.8
MD01G1049100 Malus domestica HOM05D003932 ORTHO05D004546 1.4e-16 90.5 163 33.7
Thecc.01G365900 Theobroma cacao HOM05D003932 ORTHO05D004546 1.4e-16 90.5 167 34.7
Cpa.g.sc18.210 Carica papaya HOM05D003932 ORTHO05D004546 1.8e-16 90.1 167 34.1
COL.COLO4_12605 Corchorus olitorius HOM05D003932 ORTHO05D004546 1.8e-16 90.1 150 35.3
Atru.chr5.428 Acer truncatum HOM05D003932 ORTHO05D004546 2.4e-16 89.7 167 29.9
Atru.chr5.430 Acer truncatum HOM05D003932 ORTHO05D004546 2.4e-16 89.7 167 29.3
Prupe.2G158100 Prunus persica HOM05D003932 ORTHO05D004546 2.4e-16 89.7 163 34.4
QL08p050106 Quercus lobata HOM05D003932 ORTHO05D004546 2.4e-16 89.7 181 33.1
Gorai.007G096600 Gossypium raimondii HOM05D003932 ORTHO05D004546 4.1e-16 89.0 150 35.3
Lalb_Chr19g0127151 Lupinus albus HOM05D003932 ORTHO05D004546 5.3e-16 88.6 167 33.5
VMungo0331G1015 Vigna mungo HOM05D003932 ORTHO05D004546 6.9e-16 88.2 162 34.0
Gohir.D11G090600 Gossypium hirsutum HOM05D003932 ORTHO05D004546 9.1e-16 87.8 150 34.7
SalBow5G2036 Salvia bowleyana HOM05D003932 ORTHO05D004546 9.1e-16 87.8 149 34.9
ECA236G4160 Erigeron canadensis HOM05D003932 ORTHO05D004546 1.5e-15 87.0 159 36.5
PGSC0003DMG400027782 Solanum tuberosum HOM05D003932 ORTHO05D004546 1.5e-15 87.0 164 34.8
Peaxi162Scf00021g01111 Petunia axillaris HOM05D003932 ORTHO05D004546 2.0e-15 86.7 178 34.3
Lalb_Chr10g0097321 Lupinus albus HOM05D003932 ORTHO05D004546 4.5e-15 85.5 147 38.1
QL08p050077 Quercus lobata HOM05D003932 ORTHO05D004546 4.5e-15 85.5 131 41.2
Aa31LG10G15280 Aethionema arabicum HOM05D003932 ORTHO05D004546 5.9e-15 85.1 176 34.1
Glyma.03G015500 Glycine max HOM05D003932 ORTHO05D004546 5.9e-15 85.1 168 35.1
Gorai.004G156800 Gossypium raimondii HOM05D003932 ORTHO05D004546 5.9e-15 85.1 150 32.7
Gohir.D08G151100 Gossypium hirsutum HOM05D003932 ORTHO05D004546 1.0e-14 84.3 147 33.3
Lj1g0003765 Lotus japonicus HOM05D003932 ORTHO05D004546 1.0e-14 84.3 157 33.8
CiPaw.02G026900 Carya illinoinensis HOM05D003932 ORTHO05D004546 1.3e-14 84.0 132 37.9
TPR.G9818 Trifolium pratense HOM05D003932 ORTHO05D004546 1.3e-14 84.0 162 33.3
Glyma.07G075500 Glycine max HOM05D003932 ORTHO05D004546 2.9e-14 82.8 167 32.3
DCAR_025147 Daucus carota HOM05D003932 ORTHO05D004546 3.8e-14 82.4 160 38.1
Glyma.07G075400 Glycine max HOM05D003932 ORTHO05D004546 5.0e-14 82.0 172 36.6
Manes.05G038400 Manihot esculenta HOM05D003932 ORTHO05D004546 5.0e-14 82.0 186 32.3
Sopen01g037340 Solanum pennellii HOM05D003932 ORTHO05D004546 5.0e-14 82.0 164 35.4
Aqoxy7G00392 Aquilegia oxysepala HOM05D003932 ORTHO05D004546 6.5e-14 81.6 171 33.9
Solyc01g091570.3 Solanum lycopersicum HOM05D003932 ORTHO05D004546 6.5e-14 81.6 164 34.8
VMungo1383G1115 Vigna mungo HOM05D003932 ORTHO05D004546 1.1e-13 80.9 155 32.9
CARHR171510 Cardamine hirsuta HOM05D003932 ORTHO05D004546 1.4e-13 80.5 180 31.1
MELO3C006135.2 Cucumis melo HOM05D003932 ORTHO05D004546 1.4e-13 80.5 170 32.9
Lj3g0012135 Lotus japonicus HOM05D003932 ORTHO05D004546 1.4e-13 80.5 157 33.8
Dinv32437 Davidia involucrata HOM05D003932 ORTHO05D004546 1.9e-13 80.1 140 35.0
CiPaw.02G027200 Carya illinoinensis HOM05D003932 ORTHO05D004546 2.5e-13 79.7 164 32.3
GSVIVG01027496001 Vitis vinifera HOM05D003932 ORTHO05D004546 2.5e-13 79.7 165 35.8
Manes.05G038500 Manihot esculenta HOM05D003932 ORTHO05D004546 3.2e-13 79.3 167 31.7
Sed0026606 Sechium edule HOM05D003932 ORTHO05D004546 3.2e-13 79.3 182 31.3
arahy.Tifrunner.gnm1.ann1.MUI9WD Arachis hypogaea HOM05D003932 ORTHO05D004546 4.2e-13 79.0 167 29.9
Psat4g153440 Pisum sativum HOM05D003932 ORTHO05D004546 4.2e-13 79.0 182 29.1
Medtr8g032450 Medicago truncatula HOM05D003932 ORTHO05D004546 5.5e-13 78.6 167 29.9
Medtr8g433000 Medicago truncatula HOM05D003932 ORTHO05D004546 5.5e-13 78.6 167 29.9
AT3G61200 Arabidopsis thaliana HOM05D003932 ORTHO05D004546 7.2e-13 78.2 183 30.1
Glyma.18G224900 Glycine max HOM05D003932 ORTHO05D004546 7.2e-13 78.2 181 28.7
QL08p050127 Quercus lobata HOM05D003932 ORTHO05D004546 7.2e-13 78.2 209 28.2
Sp5g02170 Schrenkiella parvula HOM05D003932 ORTHO05D004546 7.2e-13 78.2 167 30.5
Hund16950 Selenicereus undatus HOM05D003932 ORTHO05D004546 7.2e-13 78.2 152 33.6
Rhsim01G0152800 Rhododendron simsii HOM05D003932 ORTHO05D004546 9.4e-13 77.8 163 29.4
Sc23g0003150 Simmondsia chinensis HOM05D003932 ORTHO05D004546 9.4e-13 77.8 164 31.1
A04p01220 Brassica napus HOM05D003932 ORTHO05D004546 1.6e-12 77.0 168 32.1
BraA04t15840Z Brassica rapa HOM05D003932 ORTHO05D004546 2.1e-12 76.6 168 32.1
Sed0002580 Sechium edule HOM05D003932 ORTHO05D004546 2.1e-12 76.6 158 29.7
arahy.Tifrunner.gnm1.ann1.UY84ZS Arachis hypogaea HOM05D003932 ORTHO05D004546 2.7e-12 76.3 157 31.8
BcaC02g10211 Brassica carinata HOM05D003932 ORTHO05D004546 2.7e-12 76.3 168 32.1
C04p31500 Brassica napus HOM05D003932 ORTHO05D004546 2.7e-12 76.3 168 32.1
BolC4t24695H Brassica oleracea HOM05D003932 ORTHO05D004546 2.7e-12 76.3 168 32.1
HPP92_025613 Vanilla planifolia HOM05D003932 ORTHO05D004546 6.1e-12 75.1 160 31.2
Carub.0005s2787 Capsella rubella HOM05D003932 ORTHO05D004546 1.0e-11 74.3 172 30.8
Ca_25783_v3 Cicer arietinum L. HOM05D003932 ORTHO05D004546 1.4e-11 73.9 162 30.2
AL5G43470 Arabidopsis lyrata HOM05D003932 ORTHO05D004546 1.8e-11 73.6 183 29.0
arahy.Tifrunner.gnm1.ann1.67TC14 Arachis hypogaea HOM05D003932 ORTHO05D004546 1.8e-11 73.6 126 36.5
arahy.Tifrunner.gnm1.ann1.BEZL7V Arachis hypogaea HOM05D003932 ORTHO05D004546 1.8e-11 73.6 126 36.5
AUR62022757 Chenopodium quinoa HOM05D003932 ORTHO05D004546 2.3e-11 73.2 132 34.1
PSO478G2301 Papaver somniferum HOM05D003932 ORTHO05D004546 2.3e-11 73.2 136 31.6
Psat4g153400 Pisum sativum HOM05D003932 ORTHO05D004546 2.3e-11 73.2 136 34.6
CsaV3_3G009140 Cucumis sativus L. HOM05D003932 ORTHO05D004546 3.0e-11 72.8 182 30.2
Phvul.010G093700 Phaseolus vulgaris HOM05D003932 ORTHO05D004546 3.9e-11 72.4 162 30.2
arahy.Tifrunner.gnm1.ann1.VZ643L Arachis hypogaea HOM05D003932 ORTHO05D004546 5.2e-11 72.0 167 28.1
AUR62022756 Chenopodium quinoa HOM05D003932 ORTHO05D004546 8.8e-11 71.2 156 32.7
Ah.02g122980 Amaranthus hybridus HOM05D003932 ORTHO05D004546 2.0e-10 70.1 147 30.6
CSS0035798 Camellia sinensis var. sinensis HOM05D003932 ORTHO05D004546 2.6e-10 69.7 48 70.8
Sed0003987 Sechium edule HOM05D003932 ORTHO05D004546 3.3e-10 69.3 180 29.4
Zm00001eb306670 Zea mays HOM05D003932 ORTHO05D004546 4.4e-10 68.9 156 25.0
QL08p050131 Quercus lobata HOM05D003932 ORTHO05D004546 2.2e-09 66.6 49 61.2
vmacro20959 Vaccinium macrocarpon HOM05D003932 ORTHO05D004546 1.8e-08 63.5 48 58.3
TAR629G2445 Trochodendron aralioides HOM05D003932 ORTHO05D004546 2.4e-08 63.2 44 63.6
MBI04_g04735_MAGBIO Magnolia biondii HOM05D003932 ORTHO05D004546 4.1e-08 62.4 174 29.9
Prupe.2G157800 Prunus persica HOM05D003932 ORTHO05D004546 4.1e-08 62.4 48 62.5
EL10Ac1g00516 Beta vulgaris HOM05D003932 ORTHO05D004546 5.3e-08 62.0 129 31.0
Nitab4.5_0005423g0050 Nicotiana tabacum HOM05D003932 ORTHO05D004546 7.0e-08 61.6 45 60.0
PSO782G0460 Papaver somniferum HOM05D003932 ORTHO05D004546 9.1e-08 61.2 147 28.6
Os07g0462700 Oryza sativa ssp. japonica HOM05D003932 ORTHO05D004546 1.6e-07 60.5 163 26.4
Os07g0463500 Oryza sativa ssp. japonica HOM05D003932 ORTHO05D004546 2.0e-07 60.1 162 28.4
PSO478G3215 Papaver somniferum HOM05D003932 ORTHO05D004546 2.0e-07 60.1 147 27.9
EL10Ac1g00517 Beta vulgaris HOM05D003932 ORTHO05D004546 2.6e-07 59.7 50 58.0
arahy.Tifrunner.gnm1.ann1.LBI1HC Arachis hypogaea HOM05D003932 ORTHO05D004546 7.7e-07 58.2 155 30.3
FAN03G2927 Fragaria x ananassa HOM05D003932 ORTHO05D004546 1.7e-06 57.0 73 35.6
Ca_07852_v3 Cicer arietinum L. HOM05D003932 ORTHO05D004546 3.8e-06 55.8 46 54.3
Rhsim01G0152700 Rhododendron simsii HOM05D003932 ORTHO05D004546 6.5e-06 55.1 66 43.9
arahy.Tifrunner.gnm1.ann1.NCU55Y Arachis hypogaea HOM05D003932 ORTHO05D004546 8.5e-06 54.7 178 27.0
Nitab4.5_0005423g0070 Nicotiana tabacum HOM05D003932 ORTHO05D004546 8.5e-06 54.7 38 60.5


User provided reference genes

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