Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu056302.1 Olea europaea HOM05D001944 ORTHO05D002405 2.0e-208 729.2 453 100.0
Oeu013469.1 Olea europaea HOM05D001944 ORTHO05D002405 3.9e-132 475.7 459 69.7
CSS0012038 Camellia sinensis var. sinensis HOM05D001944 ORTHO05D002405 4.6e-56 223.0 469 36.9
Nitab4.5_0006619g0020 Nicotiana tabacum HOM05D001944 ORTHO05D002405 5.6e-54 216.1 477 34.8
Peaxi162Scf00167g00092 Petunia axillaris HOM05D001944 ORTHO05D002405 9.6e-54 215.3 481 41.6
MSTRG.17786 Avicennia marina HOM05D001944 ORTHO05D002405 1.8e-52 211.1 463 40.0
Dinv01067 Davidia involucrata HOM05D001944 ORTHO05D002405 3.1e-52 210.3 477 36.9
Nitab4.5_0000181g0180 Nicotiana tabacum HOM05D001944 ORTHO05D002405 3.1e-52 210.3 462 34.8
Cc01_g10870 Coffea canephora HOM05D001944 ORTHO05D002405 5.8e-51 206.1 473 37.2
Peaxi162Scf00948g00114 Petunia axillaris HOM05D001944 ORTHO05D002405 2.1e-48 197.6 465 35.5
Manes.03G122401 Manihot esculenta HOM05D001944 ORTHO05D002405 1.0e-47 195.3 471 34.8
Actinidia07154 Actinidia chinensis HOM05D001944 ORTHO05D002405 1.9e-46 191.0 417 37.4
CAN.G171.6 Capsicum annuum HOM05D001944 ORTHO05D002405 3.3e-46 190.3 474 34.4
GSVIVG01025215001 Vitis vinifera HOM05D001944 ORTHO05D002405 3.7e-45 186.8 412 35.2
Hma1.2p1_0307F.1_g119910 Hydrangea macrophylla HOM05D001944 ORTHO05D002405 2.0e-43 181.0 459 33.3
Lj2C1021G5 Lonicera japonica HOM05D001944 ORTHO05D002405 1.1e-41 175.3 411 39.7
Duzib168G0647 Durio zibethinus HOM05D001944 ORTHO05D002405 1.9e-41 174.5 411 37.2
QL01p026770 Quercus lobata HOM05D001944 ORTHO05D002405 5.5e-41 172.9 473 34.9
Thecc.09G343900 Theobroma cacao HOM05D001944 ORTHO05D002405 5.5e-41 172.9 470 33.4
Nitab4.5_0000602g0020 Nicotiana tabacum HOM05D001944 ORTHO05D002405 7.1e-41 172.6 467 33.4
Sopen06g005090 Solanum pennellii HOM05D001944 ORTHO05D002405 7.1e-41 172.6 475 33.7
Dinv32719 Davidia involucrata HOM05D001944 ORTHO05D002405 1.2e-40 171.8 397 36.0
Prupe.6G104600 Prunus persica HOM05D001944 ORTHO05D002405 2.1e-40 171.0 431 35.7
Nitab4.5_0006532g0030 Nicotiana tabacum HOM05D001944 ORTHO05D002405 3.5e-40 170.2 489 33.1
Solyc06g010240.3 Solanum lycopersicum HOM05D001944 ORTHO05D002405 3.9e-39 166.8 473 32.1
Potri.004G212700 Populus trichocarpa HOM05D001944 ORTHO05D002405 9.6e-38 162.2 399 33.3
vmacro03215 Vaccinium macrocarpon HOM05D001944 ORTHO05D002405 9.6e-38 162.2 449 32.1
Cfa011296 Carpinus fangiana HOM05D001944 ORTHO05D002405 2.8e-37 160.6 371 38.0
MSTRG.18675 Avicennia marina HOM05D001944 ORTHO05D002405 8.2e-37 159.1 458 32.5
Actinidia03719 Actinidia chinensis HOM05D001944 ORTHO05D002405 1.1e-36 158.7 468 36.1
FvH4_3g31740 Fragaria vesca HOM05D001944 ORTHO05D002405 4.0e-36 156.8 431 34.8
FAN11G3960 Fragaria x ananassa HOM05D001944 ORTHO05D002405 2.6e-35 154.1 431 34.6
Potri.013G006000 Populus trichocarpa HOM05D001944 ORTHO05D002405 2.6e-35 154.1 409 33.3
FAN21G2742 Fragaria x ananassa HOM05D001944 ORTHO05D002405 7.6e-35 152.5 436 36.7
FAN16G2569 Fragaria x ananassa HOM05D001944 ORTHO05D002405 1.0e-34 152.1 437 36.8
Actinidia20444 Actinidia chinensis HOM05D001944 ORTHO05D002405 1.7e-34 151.4 427 34.4
Haze_23780 Corylus avellana HOM05D001944 ORTHO05D002405 4.9e-34 149.8 360 40.3
MSTRG.12332 Avicennia marina HOM05D001944 ORTHO05D002405 6.5e-34 149.4 346 34.1
TAR636G3431 Trochodendron aralioides HOM05D001944 ORTHO05D002405 4.2e-33 146.7 409 34.0
CiPaw.14G085200 Carya illinoinensis HOM05D001944 ORTHO05D002405 5.5e-33 146.4 484 30.4
Rhsim13G0096400 Rhododendron simsii HOM05D001944 ORTHO05D002405 5.5e-33 146.4 420 31.7
Potri.005G010133 Populus trichocarpa HOM05D001944 ORTHO05D002405 3.5e-32 143.7 331 38.4
Sabra05G0007500 Salix brachista HOM05D001944 ORTHO05D002405 1.0e-31 142.1 353 34.8
CSS0007832 Camellia sinensis var. sinensis HOM05D001944 ORTHO05D002405 1.3e-31 141.7 421 39.0
RcHm_v2.0_Chr5g0058411 Rosa chinensis HOM05D001944 ORTHO05D002405 1.8e-31 141.4 440 37.5
Gorai.004G230500 Gossypium raimondii HOM05D001944 ORTHO05D002405 2.3e-31 141.0 352 33.0
Lj3g0013525 Lotus japonicus HOM05D001944 ORTHO05D002405 8.7e-31 139.0 412 29.9
TAR633G2605 Trochodendron aralioides HOM05D001944 ORTHO05D002405 1.5e-30 138.3 302 39.7
Gohir.A08G199401 Gossypium hirsutum HOM05D001944 ORTHO05D002405 1.9e-30 137.9 352 32.4
TWI79G1706 Tripterygium wilfordii HOM05D001944 ORTHO05D002405 3.3e-30 137.1 482 29.9
Sopen11g028320 Solanum pennellii HOM05D001944 ORTHO05D002405 7.4e-30 136.0 413 33.2
TWI31G0996 Tripterygium wilfordii HOM05D001944 ORTHO05D002405 1.6e-29 134.8 495 29.1
Solyc11g069610.3 Solanum lycopersicum HOM05D001944 ORTHO05D002405 6.3e-29 132.9 411 32.8
MD11G1139900 Malus domestica HOM05D001944 ORTHO05D002405 2.4e-28 131.0 466 34.5
Cpa.g.sc311.2 Carica papaya HOM05D001944 ORTHO05D002405 9.0e-28 129.0 481 30.1
Migut.N02586 Erythranthe guttata HOM05D001944 ORTHO05D002405 1.5e-27 128.3 487 39.4
Sc21g0003900 Simmondsia chinensis HOM05D001944 ORTHO05D002405 1.5e-27 128.3 434 30.6
TAR369G0775 Trochodendron aralioides HOM05D001944 ORTHO05D002405 2.0e-27 127.9 459 29.8
MD03G1121600 Malus domestica HOM05D001944 ORTHO05D002405 3.4e-27 127.1 481 28.5
Hund01491 Selenicereus undatus HOM05D001944 ORTHO05D002405 1.3e-26 125.2 426 30.5
Gohir.D05G104800 Gossypium hirsutum HOM05D001944 ORTHO05D002405 5.0e-26 123.2 168 46.4
COL.COLO4_18305 Corchorus olitorius HOM05D001944 ORTHO05D002405 6.5e-26 122.9 299 35.1
Gorai.009G108800 Gossypium raimondii HOM05D001944 ORTHO05D002405 2.5e-25 120.9 168 46.4
Rhsim01G0215200 Rhododendron simsii HOM05D001944 ORTHO05D014293 3.2e-25 120.6 353 31.7
Lalb_Chr01g0004401 Lupinus albus HOM05D001944 ORTHO05D011318 2.7e-24 117.5 415 29.2
Lj1A201T36 Lonicera japonica HOM05D001944 ORTHO05D002405 3.6e-24 117.1 138 45.7
Ciclev10027663m.g Citrus clementina HOM05D001944 ORTHO05D002405 6.1e-24 116.3 414 32.4
CAN.G631.45 Capsicum annuum HOM05D000550 ORTHO05D009781 7.9e-24 115.9 452 28.8
Gohir.A05G105000 Gossypium hirsutum HOM05D001944 ORTHO05D002405 1.0e-23 115.5 100 59.0
PGR102G2473 Punica granatum HOM05D001944 ORTHO05D002405 1.4e-23 115.2 312 34.3
vmacro14422 Vaccinium macrocarpon HOM05D001944 ORTHO05D002405 8.8e-23 112.5 466 32.4
Lsat_1_v5_gn_1_63980 Lactuca sativa HOM05D001944 ORTHO05D002405 1.5e-22 111.7 163 43.6
MELO3C004905.2 Cucumis melo HOM05D001944 ORTHO05D002405 5.7e-22 109.8 435 29.9
Ca_01379_v3 Cicer arietinum L. HOM05D001944 ORTHO05D002405 1.3e-21 108.6 304 32.2
Ca_01395_v3 Cicer arietinum L. HOM05D001944 ORTHO05D002405 1.3e-21 108.6 304 32.2
DCAR_022760 Daucus carota HOM05D001944 ORTHO05D002405 1.3e-21 108.6 502 36.3
AUR62022774 Chenopodium quinoa HOM05D001944 ORTHO05D002405 2.2e-21 107.8 415 29.6
CsaV3_1G013920 Cucumis sativus L. HOM05D001944 ORTHO05D002405 4.8e-21 106.7 441 30.2
Aqoxy1G01204 Aquilegia oxysepala HOM05D001944 ORTHO05D002405 8.2e-21 105.9 415 30.8
Lalb_Chr24g0394751 Lupinus albus HOM05D001944 ORTHO05D002405 8.2e-21 105.9 320 30.3
ClCG03G002980 Citrullus lanatus HOM05D001944 ORTHO05D002405 1.1e-20 105.5 422 32.0
EL10Ac9g22555 Beta vulgaris HOM05D001944 ORTHO05D002405 1.5e-19 101.7 94 52.1
Lalb_Chr19g0137131 Lupinus albus HOM05D001944 ORTHO05D011318 2.0e-19 101.3 407 29.7
Prupe.6G104700 Prunus persica HOM05D001944 ORTHO05D002405 3.4e-19 100.5 423 26.0
Lsat_1_v5_gn_2_98901 Lactuca sativa HOM05D001944 ORTHO05D002405 1.0e-18 99.0 149 41.6
Migut.D02244 Erythranthe guttata HOM05D001944 ORTHO05D002405 1.7e-18 98.2 144 40.3
Glyma.12G077400 Glycine max HOM05D001944 ORTHO05D011318 3.8e-18 97.1 406 28.1
PSO339G1466 Papaver somniferum HOM05D001944 ORTHO05D002405 3.8e-18 97.1 450 28.7
DCAR_006069 Daucus carota HOM05D001944 ORTHO05D002405 5.0e-18 96.7 155 40.6
HanXRQChr14g0452741 Helianthus annuus HOM05D001944 ORTHO05D002405 6.5e-18 96.3 154 41.6
arahy.Tifrunner.gnm1.ann1.D4VV12 Arachis hypogaea HOM05D001944 ORTHO05D002405 8.5e-18 95.9 306 30.1
AUR62029227 Chenopodium quinoa HOM05D001944 ORTHO05D002405 1.4e-17 95.1 136 38.2
Nn2g13727 Nelumbo nucifera HOM05D001944 ORTHO05D002405 1.4e-17 95.1 436 28.4
PSO063G0478 Papaver somniferum HOM05D001944 ORTHO05D002405 1.4e-17 95.1 452 29.0
Ah.01g003060 Amaranthus hybridus HOM05D001944 ORTHO05D002405 3.2e-17 94.0 103 50.5
Lsat_1_v5_gn_5_80480 Lactuca sativa HOM05D004045 ORTHO05D002405 3.2e-17 94.0 158 39.9
Medtr2g095030 Medicago truncatula HOM05D001944 ORTHO05D002405 4.2e-17 93.6 325 30.2
Glyma.11G196900 Glycine max HOM05D001944 ORTHO05D011318 7.2e-17 92.8 406 26.6
AUR62029226 Chenopodium quinoa HOM05D001944 ORTHO05D002405 1.2e-16 92.0 435 27.4
arahy.Tifrunner.gnm1.ann1.02PMC1 Arachis hypogaea HOM05D001944 ORTHO05D002405 2.1e-16 91.3 316 28.8
MD11G1140000 Malus domestica HOM05D001944 ORTHO05D002405 2.1e-16 91.3 307 38.4
Glyma.12G175400 Glycine max HOM05D001944 ORTHO05D002405 2.7e-16 90.9 269 31.6
SalBow3G3117 Salvia bowleyana HOM05D001944 ORTHO05D002405 6.1e-16 89.7 213 31.9
Sed0024562 Sechium edule HOM05D001944 ORTHO05D002405 7.9e-16 89.4 425 33.4
HanXRQChr01g0019291 Helianthus annuus HOM05D001944 ORTHO05D002405 2.3e-15 87.8 107 43.9
HanXRQChr01g0019301 Helianthus annuus HOM05D001944 ORTHO05D002405 3.0e-15 87.4 291 29.6
ECA248G3660 Erigeron canadensis HOM05D001944 ORTHO05D002405 6.7e-15 86.3 98 48.0
ATR0048G049 Amborella trichopoda HOM05D001944 ORTHO05D002405 8.8e-15 85.9 134 44.0
ECA238G1293 Erigeron canadensis HOM05D001944 ORTHO05D002405 8.8e-15 85.9 106 45.3
Glyma.13G324500 Glycine max HOM05D001944 ORTHO05D002405 8.8e-15 85.9 268 33.2
Dinv37298 Davidia involucrata HOM05D001944 ORTHO05D002405 1.1e-14 85.5 135 37.8
HanXRQChr01g0019281 Helianthus annuus HOM05D001944 ORTHO05D002405 2.0e-14 84.7 150 39.3
SGA_v2.0_scaffold116G32253 Striga asiatica HOM05D001944 ORTHO05D002405 2.6e-14 84.3 148 37.2
ECA248G2414 Erigeron canadensis HOM05D001944 ORTHO05D002405 7.4e-14 82.8 107 45.8
Lj3g0022042 Lotus japonicus HOM05D001944 ORTHO05D011318 7.4e-14 82.8 318 28.6
Sed0004333 Sechium edule HOM05D001944 ORTHO05D002405 1.3e-13 82.0 288 29.5
TPR.G11481 Trifolium pratense HOM05D001944 ORTHO05D002405 2.8e-13 80.9 416 33.4
HanXRQChr01g0019271 Helianthus annuus HOM05D001944 ORTHO05D002405 6.3e-13 79.7 111 40.5
arahy.Tifrunner.gnm1.ann1.ST0ZZW Arachis hypogaea HOM05D001944 ORTHO05D011318 8.2e-13 79.3 111 44.1
Phvul.005G133500 Phaseolus vulgaris HOM05D001944 ORTHO05D002405 8.2e-13 79.3 265 29.1
Nn2g11517 Nelumbo nucifera HOM05D001944 ORTHO05D002405 1.1e-12 79.0 95 45.3
Psat5g279720 Pisum sativum HOM05D001944 ORTHO05D002405 1.8e-12 78.2 432 26.4
SHI21823 Sapria himalayana HOM05D001944 ORTHO05D002405 3.1e-12 77.4 76 51.3
VMungo1080G1631 Vigna mungo HOM05D001944 ORTHO05D002405 4.1e-12 77.0 334 26.3
Actinidia24117 Actinidia chinensis HOM05D001944 ORTHO05D002405 9.1e-12 75.9 195 33.8
CSS0041121 Camellia sinensis var. sinensis HOM05D001944 ORTHO05D017225 1.5e-11 75.1 100 42.0
FAN12G2222 Fragaria x ananassa HOM05D001944 ORTHO05D020674 1.5e-11 75.1 122 41.0
CSS0009803 Camellia sinensis var. sinensis HOM05D001944 ORTHO05D017225 5.9e-11 73.2 100 41.0
FvH4_4g08540 Fragaria vesca HOM05D001944 ORTHO05D020674 7.7e-11 72.8 167 34.7
PSO017G6475 Papaver somniferum HOM05D001944 ORTHO05D002405 1.3e-10 72.0 90 44.4
PSO675G7498 Papaver somniferum HOM05D001944 ORTHO05D002405 1.3e-10 72.0 94 43.6
PSO339G2779 Papaver somniferum HOM05D001944 ORTHO05D002405 2.2e-10 71.2 90 44.4
FAN17G2018 Fragaria x ananassa HOM05D001944 ORTHO05D020674 2.9e-10 70.9 167 33.5
arahy.Tifrunner.gnm1.ann1.H0XM2A Arachis hypogaea HOM05D001944 ORTHO05D011318 5.0e-10 70.1 407 26.5
Phvul.011G081700 Phaseolus vulgaris HOM05D001944 ORTHO05D011318 6.5e-10 69.7 308 26.0
Lsat_1_v5_gn_7_27800 Lactuca sativa HOM05D001944 ORTHO05D002405 8.5e-10 69.3 130 37.7
CANSAT54G1673 Cannabis sativa HOM05D001944 ORTHO05D002405 1.1e-09 68.9 112 38.4
PSO384G1822 Papaver somniferum HOM05D001944 ORTHO05D002405 1.1e-09 68.9 90 42.2
Aqoxy7G00183 Aquilegia oxysepala HOM05D001944 ORTHO05D002405 1.5e-09 68.6 105 39.0
Thecc.05G062600 Theobroma cacao HOM05D001944 ORTHO05D002405 3.2e-09 67.4 98 42.9
HPP92_003456 Vanilla planifolia HOM05D041147 ORTHO05D017225 4.2e-09 67.0 130 32.3
HPP92_003459 Vanilla planifolia HOM05D041147 ORTHO05D017225 4.2e-09 67.0 130 32.3
PSO675G2075 Papaver somniferum HOM05D001944 ORTHO05D002405 7.2e-09 66.2 108 36.1
EL10Ac7g16595 Beta vulgaris HOM05D001944 ORTHO05D002405 1.2e-08 65.5 138 37.0
Ca_19290_v3 Cicer arietinum L. HOM05D001944 ORTHO05D011318 1.6e-08 65.1 274 27.7
RcHm_v2.0_Chr4g0405411 Rosa chinensis HOM05D001944 ORTHO05D020674 1.6e-08 65.1 107 40.2
PSO732G0719 Papaver somniferum HOM05D001944 ORTHO05D002405 2.1e-08 64.7 109 40.4
CDE02G3605 Ceratophyllum demersum HOM05D001944 ORTHO05D002405 2.7e-08 64.3 119 35.3
Medtr4g058650 Medicago truncatula HOM05D001944 ORTHO05D011318 2.7e-08 64.3 274 25.9
QL93p2013_0009 Quercus lobata HOM05D001944 ORTHO05D002405 2.7e-08 64.3 92 40.2
QL07p044103 Quercus lobata HOM05D001944 ORTHO05D002405 3.6e-08 63.9 92 40.2
unitig_21.g20906 Utricularia gibba HOM05D001944 ORTHO05D002405 3.6e-08 63.9 135 33.3
SalBow3G2448 Salvia bowleyana HOM05D001944 ORTHO05D002405 6.1e-08 63.2 83 43.4
VMungo1127G1376 Vigna mungo HOM05D001944 ORTHO05D011318 6.1e-08 63.2 305 26.9
vmacro20024 Vaccinium macrocarpon HOM05D001944 ORTHO05D017225 8.0e-08 62.8 83 42.2
HanXRQChr13g0421871 Helianthus annuus HOM05D001944 ORTHO05D002405 2.3e-07 61.2 117 35.9
Oeu002984.1 Olea europaea HOM05D001944 ORTHO05D002405 2.3e-07 61.2 74 43.2
PGSC0003DMG400019409 Solanum tuberosum HOM05D001944 ORTHO05D002405 2.3e-07 61.2 85 43.5
TWI74G0797 Tripterygium wilfordii HOM05D001944 ORTHO05D002405 3.0e-07 60.8 110 37.3
Duzib128G0909 Durio zibethinus HOM05D001944 ORTHO05D002405 3.9e-07 60.5 81 44.4
unitig_8.g3297 Utricularia gibba HOM05D001944 ORTHO05D002405 3.9e-07 60.5 58 44.8
Lsat_1_v5_gn_1_53160 Lactuca sativa HOM05D001944 ORTHO05D002405 5.2e-07 60.1 112 36.6
C08p50200 Brassica napus HOM05D001944 ORTHO05D002405 6.7e-07 59.7 105 33.3
BolC8t52549H Brassica oleracea HOM05D001944 ORTHO05D002405 6.7e-07 59.7 105 33.3
Lj1g0027821 Lotus japonicus HOM05D001944 ORTHO05D002405 6.7e-07 59.7 145 33.8
Nitab4.5_0000101g0280 Nicotiana tabacum HOM05D001944 ORTHO05D002405 6.7e-07 59.7 80 47.5
THA.LOC104800593 Tarenaya hassleriana HOM05D001944 ORTHO05D002405 6.7e-07 59.7 326 32.8
Sopen10g005720 Solanum pennellii HOM05D001944 ORTHO05D002405 8.8e-07 59.3 85 42.4
Ciclev10029237m.g Citrus clementina HOM05D001944 ORTHO05D002405 2.0e-06 58.2 205 33.2
Nitab4.5_0005320g0010 Nicotiana tabacum HOM05D001944 ORTHO05D002405 2.0e-06 58.2 79 46.8
Peaxi162Scf00123g00910 Petunia axillaris HOM05D001944 ORTHO05D002405 2.6e-06 57.8 99 42.4
Rhsim05G0179600 Rhododendron simsii HOM05D001944 ORTHO05D002405 2.6e-06 57.8 179 31.3
BraA09t41943Z Brassica rapa HOM05D001944 ORTHO05D002405 3.3e-06 57.4 109 31.2
PSO732G0800 Papaver somniferum HOM05D001944 ORTHO05D002405 4.4e-06 57.0 101 33.7
THA.LOC104826377 Tarenaya hassleriana HOM05D001944 ORTHO05D002405 4.4e-06 57.0 92 35.9
Cc06_g04010 Coffea canephora HOM05D001944 ORTHO05D002405 5.7e-06 56.6 80 38.8
Lsat_1_v5_gn_1_53241 Lactuca sativa HOM05D001944 ORTHO05D002405 5.7e-06 56.6 87 36.8
Oeu036621.1 Olea europaea HOM05D001944 ORTHO05D002405 5.7e-06 56.6 98 36.7
Solyc10g011940.1 Solanum lycopersicum HOM05D001944 ORTHO05D002405 7.4e-06 56.2 85 41.2


User provided reference genes

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