Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu056183.1 Olea europaea HOM05D005945 ORTHO05D006749 0.0e+00 1546.6 809 100.0
Oeu036192.1 Olea europaea HOM05D005945 ORTHO05D006749 2.3e-159 567.0 837 46.5
MSTRG.25161 Avicennia marina HOM05D005945 ORTHO05D006749 6.6e-146 522.3 810 43.6
Migut.C00710 Erythranthe guttata HOM05D005945 ORTHO05D006749 3.7e-133 479.9 807 42.4
Dinv39407 Davidia involucrata HOM05D005945 ORTHO05D006749 8.3e-117 425.6 822 39.4
Cc10_g03040 Coffea canephora HOM05D005945 ORTHO05D006749 5.4e-116 422.9 807 38.2
Actinidia15315 Actinidia chinensis HOM05D005945 ORTHO05D006749 1.6e-107 394.8 832 37.7
Nitab4.5_0000110g0520 Nicotiana tabacum HOM05D005945 ORTHO05D006749 1.6e-107 394.8 830 37.2
CSS0001698 Camellia sinensis var. sinensis HOM05D005945 ORTHO05D006749 5.6e-105 386.3 832 37.4
CSS0038834 Camellia sinensis var. sinensis HOM05D005945 ORTHO05D006749 9.6e-105 385.6 833 37.3
SGA_v2.0_scaffold326G48709 Striga asiatica HOM05D005945 ORTHO05D006749 2.1e-104 384.4 828 36.7
PGSC0003DMG400005162 Solanum tuberosum HOM05D005945 ORTHO05D006749 4.0e-103 380.2 820 37.0
Nitab4.5_0003783g0040 Nicotiana tabacum HOM05D005945 ORTHO05D006749 6.9e-103 379.4 829 36.6
Peaxi162Scf00690g00118 Petunia axillaris HOM05D005945 ORTHO05D006749 4.9e-101 373.2 846 36.3
Sopen04g033790 Solanum pennellii HOM05D005945 ORTHO05D006749 8.4e-93 345.9 644 39.8
TAR376G0838 Trochodendron aralioides HOM05D005945 ORTHO05D006749 2.1e-91 341.3 837 34.4
Solyc04g080200.4 Solanum lycopersicum HOM05D005945 ORTHO05D006749 3.9e-90 337.0 637 39.2
Rhsim06G0034700 Rhododendron simsii HOM05D005945 ORTHO05D006749 3.2e-76 290.8 833 32.2
DCAR_008766 Daucus carota HOM05D005945 ORTHO05D006749 1.6e-72 278.5 873 31.2
Prupe.1G381200 Prunus persica HOM05D005945 ORTHO05D006749 2.8e-72 277.7 833 32.5
Haze_17984 Corylus avellana HOM05D005945 ORTHO05D006749 6.1e-67 260.0 863 29.5
Thecc.08G024700 Theobroma cacao HOM05D005945 ORTHO05D006749 8.8e-66 256.1 921 31.2
COL.COLO4_26338 Corchorus olitorius HOM05D005945 ORTHO05D006749 3.3e-65 254.2 979 28.9
Duzib093G2051 Durio zibethinus HOM05D005945 ORTHO05D006749 2.8e-64 251.1 916 31.9
QL02p007988 Quercus lobata HOM05D005945 ORTHO05D006749 2.8e-64 251.1 1000 29.8
Cfa018140 Carpinus fangiana HOM05D005945 ORTHO05D006749 1.8e-63 248.4 865 29.4
RcHm_v2.0_Chr6g0300761 Rosa chinensis HOM05D005945 ORTHO05D006749 1.8e-63 248.4 822 31.8
Lsat_1_v5_gn_1_17620 Lactuca sativa HOM05D005945 ORTHO05D006749 9.1e-63 246.1 392 45.7
HanXRQChr04g0105591 Helianthus annuus HOM05D005945 ORTHO05D006749 4.5e-62 243.8 823 28.8
FAN27G1966 Fragaria x ananassa HOM05D005945 ORTHO05D006749 1.7e-61 241.9 827 31.6
Nn5g29549 Nelumbo nucifera HOM05D005945 ORTHO05D006749 1.1e-60 239.2 909 27.6
FvH4_2g39990 Fragaria vesca HOM05D005945 ORTHO05D006749 1.6e-59 235.3 831 30.8
FAN15G0837 Fragaria x ananassa HOM05D005945 ORTHO05D006749 4.7e-59 233.8 830 31.0
Lj4A42T73 Lonicera japonica HOM05D005945 ORTHO05D006749 6.1e-59 233.4 185 66.5
FAN20G0334 Fragaria x ananassa HOM05D005945 ORTHO05D006749 3.0e-58 231.1 839 30.8
HanXRQChr04g0105581 Helianthus annuus HOM05D005945 ORTHO05D006749 8.8e-58 229.6 265 49.8
ECA247G0868 Erigeron canadensis HOM05D005945 ORTHO05D006749 2.0e-57 228.4 369 43.1
GSVIVG01009690001 Vitis vinifera HOM05D005945 ORTHO05D006749 9.7e-57 226.1 260 50.0
Gorai.010G010800 Gossypium raimondii HOM05D005945 ORTHO05D006749 1.3e-56 225.7 901 30.9
Manes.18G028200 Manihot esculenta HOM05D005945 ORTHO05D006749 3.1e-55 221.1 865 30.1
Gohir.D06G008100 Gossypium hirsutum HOM05D005945 ORTHO05D006749 1.5e-54 218.8 906 30.7
Gohir.A06G010700 Gossypium hirsutum HOM05D005945 ORTHO05D006749 5.9e-54 216.9 897 30.4
Eucgr.F01555 Eucalyptus grandis HOM05D005945 ORTHO05D006749 2.5e-52 211.5 847 28.9
MD08G1033800 Malus domestica HOM05D005945 ORTHO05D006749 7.2e-52 209.9 358 43.6
MELO3C010931.2 Cucumis melo HOM05D005945 ORTHO05D006749 8.0e-51 206.5 856 26.4
Actinidia22556 Actinidia chinensis HOM05D005945 ORTHO05D006749 3.0e-50 204.5 792 28.3
TAR628G0886 Trochodendron aralioides HOM05D005945 ORTHO05D006749 1.1e-49 202.6 267 47.9
Potri.014G181200 Populus trichocarpa HOM05D005945 ORTHO05D006749 1.5e-49 202.2 512 32.8
Sc15g0006890 Simmondsia chinensis HOM05D005945 ORTHO05D006749 1.5e-49 202.2 867 28.4
CsaV3_2G028570 Cucumis sativus L. HOM05D005945 ORTHO05D006749 2.0e-49 201.8 854 27.6
Hund26580 Selenicereus undatus HOM05D005945 ORTHO05D006749 3.3e-49 201.1 886 28.0
PGR031G1506 Punica granatum HOM05D005945 ORTHO05D006749 1.3e-48 199.1 802 29.6
Cpa.g.sc64.76 Carica papaya HOM05D005945 ORTHO05D006749 1.7e-48 198.7 1019 25.9
Dinv36067 Davidia involucrata HOM05D005945 ORTHO05D006749 2.8e-48 198.0 222 54.5
Phvul.010G012000 Phaseolus vulgaris HOM05D005945 ORTHO05D006749 3.7e-48 197.6 835 27.2
TWI12G1232 Tripterygium wilfordii HOM05D005945 ORTHO05D006749 8.2e-48 196.4 807 28.4
Lj3g0003314 Lotus japonicus HOM05D005945 ORTHO05D006749 1.1e-47 196.1 823 28.2
CANSAT25G3494 Cannabis sativa HOM05D005945 ORTHO05D006749 7.0e-47 193.4 258 45.3
ClCG08G015230 Citrullus lanatus HOM05D005945 ORTHO05D006749 5.9e-46 190.3 830 26.6
THA.LOC104803244 Tarenaya hassleriana HOM05D005945 ORTHO05D006749 1.0e-45 189.5 866 26.0
CiPaw.15G076000 Carya illinoinensis HOM05D005945 ORTHO05D006749 3.8e-45 187.6 1076 25.4
arahy.Tifrunner.gnm1.ann1.Q0ZVI3 Arachis hypogaea HOM05D005945 ORTHO05D006749 6.5e-45 186.8 625 31.2
Sabra14G0141200 Salix brachista HOM05D005945 ORTHO05D006749 1.1e-44 186.0 525 32.2
Sed0009733 Sechium edule HOM05D005945 ORTHO05D006749 5.5e-44 183.7 850 26.5
Manes.05G161400 Manihot esculenta HOM05D005945 ORTHO05D006749 9.4e-44 183.0 873 27.5
Atru.chr13.502 Acer truncatum HOM05D005945 ORTHO05D006749 1.6e-43 182.2 236 47.0
TAR628G0416 Trochodendron aralioides HOM05D005945 ORTHO05D006749 2.7e-43 181.4 180 56.7
Medtr4g019490 Medicago truncatula HOM05D005945 ORTHO05D006749 3.6e-43 181.0 257 47.1
TPR.G32532 Trifolium pratense HOM05D005945 ORTHO05D006749 4.7e-43 180.6 272 45.6
Ca_03064_v3 Cicer arietinum L. HOM05D005945 ORTHO05D006749 1.0e-42 179.5 863 27.0
Psat7g242000 Pisum sativum HOM05D005945 ORTHO05D006749 2.3e-42 178.3 253 44.7
MD15G1030400 Malus domestica HOM05D005945 ORTHO05D006749 4.0e-42 177.6 610 31.8
arahy.Tifrunner.gnm1.ann1.01TKSZ Arachis hypogaea HOM05D005945 ORTHO05D006749 5.2e-42 177.2 658 29.6
Glyma.01G104600 Glycine max HOM05D005945 ORTHO05D006749 1.5e-41 175.6 315 38.1
Lj2g0002553 Lotus japonicus HOM05D005945 ORTHO05D006749 5.7e-41 173.7 816 27.5
PSO675G9049 Papaver somniferum HOM05D005945 ORTHO05D006749 1.7e-40 172.2 267 41.2
PSO541G4169 Papaver somniferum HOM05D005945 ORTHO05D006749 1.8e-39 168.7 268 41.0
VMungo0331G0095 Vigna mungo HOM05D005945 ORTHO05D006749 1.8e-39 168.7 828 26.1
Sed0010063 Sechium edule HOM05D005945 ORTHO05D006749 1.6e-38 165.6 861 25.4
Glyma.03G071500 Glycine max HOM05D005945 ORTHO05D006749 1.9e-36 158.7 901 24.8
vmacro21630 Vaccinium macrocarpon HOM05D005945 ORTHO05D006749 2.5e-36 158.3 694 28.7
Aqoxy4G01586 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 3.2e-36 157.9 922 25.7
Zm00001eb404680 Zea mays HOM05D005945 ORTHO05D006749 4.2e-36 157.5 266 39.1
Ah.11g043130 Amaranthus hybridus HOM05D005945 ORTHO05D006749 1.6e-35 155.6 332 34.0
BolC8t50829H Brassica oleracea HOM05D005945 ORTHO05D006749 3.6e-35 154.5 275 36.4
MBI16_g17464_MAGBIO Magnolia biondii HOM05D005945 ORTHO05D006749 8.0e-35 153.3 995 24.9
Aa31LG10G11720 Aethionema arabicum HOM05D005945 ORTHO05D006749 5.2e-34 150.6 809 26.1
BcaC07g39998 Brassica carinata HOM05D005945 ORTHO05D006749 6.8e-34 150.2 333 34.8
C08p32110 Brassica napus HOM05D005945 ORTHO05D006749 6.8e-34 150.2 333 34.8
Gohir.D02G094500 Gossypium hirsutum HOM05D005945 ORTHO05D006749 1.5e-33 149.1 484 31.2
A09p49740 Brassica napus HOM05D005945 ORTHO05D006749 3.4e-33 147.9 326 35.3
BraA09t40427Z Brassica rapa HOM05D005945 ORTHO05D006749 3.4e-33 147.9 326 35.3
EL10Ac1g01817 Beta vulgaris HOM05D005945 ORTHO05D006749 9.8e-33 146.4 378 33.3
Sp5g05720 Schrenkiella parvula HOM05D005945 ORTHO05D006749 9.8e-33 146.4 302 33.8
AL5G38260 Arabidopsis lyrata HOM05D005945 ORTHO05D006749 2.8e-32 144.8 267 36.0
Zm00001eb021170 Zea mays HOM05D005945 ORTHO05D006749 4.9e-32 144.1 257 38.9
Lalb_Chr03g0042671 Lupinus albus HOM05D005945 ORTHO05D006749 8.3e-32 143.3 814 25.8
Aqoxy6G01057 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 1.4e-31 142.5 246 40.2
BcaC07g40112 Brassica carinata HOM05D005945 ORTHO05D006749 4.1e-31 141.0 259 37.1
Carub.0005s2360 Capsella rubella HOM05D005945 ORTHO05D006749 9.1e-31 139.8 302 34.8
Gorai.005G107400 Gossypium raimondii HOM05D005945 ORTHO05D006749 9.1e-31 139.8 485 30.5
Os03g0594700 Oryza sativa ssp. japonica HOM05D005945 ORTHO05D006749 1.2e-30 139.4 254 37.4
AT3G56870 Arabidopsis thaliana HOM05D005945 ORTHO05D006749 2.0e-30 138.7 644 26.2
CARHR167020 Cardamine hirsuta HOM05D005945 ORTHO05D006749 3.5e-30 137.9 258 37.2
AUR62043686 Chenopodium quinoa HOM05D005945 ORTHO05D006749 1.3e-29 136.0 914 25.5
HPP92_021270 Vanilla planifolia HOM05D005945 ORTHO05D006749 1.3e-29 136.0 255 37.6
AUR62038825 Chenopodium quinoa HOM05D005945 ORTHO05D006749 5.0e-29 134.0 850 25.3
Aqoxy4G01559 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 1.1e-28 132.9 413 30.3
vmacro21631 Vaccinium macrocarpon HOM05D005945 ORTHO05D006749 7.2e-28 130.2 179 48.6
ATR0618G067 Amborella trichopoda HOM05D005945 ORTHO05D006749 8.0e-27 126.7 158 49.4
Thhalv10005811m.g Eutrema salsugineum HOM05D005945 ORTHO05D006749 1.4e-26 125.9 655 27.0
SEGI_34412 Sequoiadendron giganteum HOM05D057448 ORTHO05D006749 7.5e-25 120.2 173 43.4
Lalb_Chr19g0125071 Lupinus albus HOM05D005945 ORTHO05D006749 3.2e-23 114.8 152 44.1
Ah.05g167400 Amaranthus hybridus HOM05D005945 ORTHO05D006749 1.0e-21 109.8 220 34.1
Lj4P42T20 Lonicera japonica HOM05D005945 ORTHO05D006749 6.8e-18 97.1 388 31.2
TAR381G0602 Trochodendron aralioides HOM05D005945 ORTHO05D006749 1.1e-15 89.7 146 44.5
Atru.chr13.504 Acer truncatum HOM05D005945 ORTHO05D006749 2.0e-14 85.5 332 28.3
HPP92_021280 Vanilla planifolia HOM05D050438 ORTHO05D006749 8.6e-13 80.1 255 31.4
CDE04G3738 Ceratophyllum demersum HOM05D060868 ORTHO05D006749 2.3e-10 72.0 252 27.8
AagrBONN_evm.TU.Sc2ySwM_344.3266 Anthoceros agrestis HOM05D005945 ORTHO05D006749 2.6e-09 68.6 163 30.7
Sc18g0006320 Simmondsia chinensis HOM05D005945 ORTHO05D006749 1.1e-07 63.2 414 25.6
CBR_g25863 Chara braunii HOM05D005945 ORTHO05D006749 7.1e-07 60.5 159 28.9
Mapoly0005s0138 Marchantia polymorpha HOM05D036654 ORTHO05D006749 1.6e-06 59.3 159 32.7


User provided reference genes

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