Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu056107.1 Olea europaea HOM05D004177 ORTHO05D004826 1.3e-41 172.6 85 100.0
Oeu062208.1 Olea europaea HOM05D004177 ORTHO05D004826 2.4e-27 125.2 81 77.8
Oeu062209.1 Olea europaea HOM05D004177 ORTHO05D004826 3.2e-27 124.8 81 77.8
Oeu052128.1 Olea europaea HOM05D004177 ORTHO05D004826 5.5e-27 124.0 78 78.2
Dinv42291 Davidia involucrata HOM05D004177 ORTHO05D004826 1.6e-26 122.5 78 76.9
Oeu062213.1 Olea europaea HOM05D004177 ORTHO05D004826 6.0e-26 120.6 81 75.3
TAR636G0014 Trochodendron aralioides HOM05D004177 ORTHO05D004826 6.0e-26 120.6 76 77.6
Dinv36734 Davidia involucrata HOM05D004177 ORTHO05D004826 7.9e-26 120.2 78 75.6
Hma1.2p1_1074F.1_g254310 Hydrangea macrophylla HOM05D004177 ORTHO05D004826 7.9e-26 120.2 73 79.5
CSS0022162 Camellia sinensis var. sinensis HOM05D004177 ORTHO05D004826 1.8e-25 119.0 78 74.4
Cpa.g.sc19.251 Carica papaya HOM05D004177 ORTHO05D004826 1.8e-25 119.0 78 74.4
Oeu062211.1 Olea europaea HOM05D004177 ORTHO05D004826 1.8e-25 119.0 81 75.3
HanXRQChr04g0112631 Helianthus annuus HOM05D004177 ORTHO05D004826 2.3e-25 118.6 75 77.3
MBI04_g06223_MAGBIO Magnolia biondii HOM05D004177 ORTHO05D004826 3.9e-25 117.9 76 75.0
THA.LOC104816571 Tarenaya hassleriana HOM05D004177 ORTHO05D004826 6.7e-25 117.1 73 78.1
THA.LOC104826863 Tarenaya hassleriana HOM05D004177 ORTHO05D004826 6.7e-25 117.1 78 73.1
EL10Ac6g14643 Beta vulgaris HOM05D004177 ORTHO05D004826 8.7e-25 116.7 72 77.8
Sabra03G0136900 Salix brachista HOM05D004177 ORTHO05D004826 8.7e-25 116.7 77 74.0
Ciclev10008698m.g Citrus clementina HOM05D004177 ORTHO05D004826 1.1e-24 116.3 76 75.0
Lsat_1_v5_gn_8_88081 Lactuca sativa HOM05D004177 ORTHO05D004826 1.1e-24 116.3 75 74.7
Manes.15G104600 Manihot esculenta HOM05D004177 ORTHO05D004826 1.1e-24 116.3 75 76.0
TWI12G1142 Tripterygium wilfordii HOM05D004177 ORTHO05D004826 1.1e-24 116.3 72 77.8
MSTRG.19533 Avicennia marina HOM05D004177 ORTHO05D004826 1.5e-24 115.9 78 71.8
COL.COLO4_19342 Corchorus olitorius HOM05D004177 ORTHO05D004826 1.5e-24 115.9 74 77.0
FAN28G1160 Fragaria x ananassa HOM05D004177 ORTHO05D004826 1.5e-24 115.9 76 73.7
PSO210G0074 Papaver somniferum HOM05D004177 ORTHO05D004826 1.5e-24 115.9 75 74.7
TWI09G1015 Tripterygium wilfordii HOM05D004177 ORTHO05D004826 1.5e-24 115.9 75 73.3
CiPaw.03G219400 Carya illinoinensis HOM05D004177 ORTHO05D004826 1.9e-24 115.5 75 74.7
CiPaw.12G022300 Carya illinoinensis HOM05D004177 ORTHO05D004826 1.9e-24 115.5 71 78.9
Ca_18171_v3 Cicer arietinum L. HOM05D004177 ORTHO05D004826 1.9e-24 115.5 71 78.9
MD15G1202800 Malus domestica HOM05D004177 ORTHO05D004826 1.9e-24 115.5 78 74.4
Potri.003G186900 Populus trichocarpa HOM05D004177 ORTHO05D004826 1.9e-24 115.5 77 72.7
BolC2t06219H Brassica oleracea HOM05D004177 ORTHO05D004826 2.5e-24 115.2 75 74.7
BraA02t04865Z Brassica rapa HOM05D004177 ORTHO05D004826 2.5e-24 115.2 75 74.7
Cfa003130 Carpinus fangiana HOM05D004177 ORTHO05D004826 2.5e-24 115.2 71 78.9
AUR62003036 Chenopodium quinoa HOM05D004177 ORTHO05D004826 2.5e-24 115.2 73 75.3
AUR62007842 Chenopodium quinoa HOM05D004177 ORTHO05D004826 2.5e-24 115.2 73 75.3
Migut.J00439 Erythranthe guttata HOM05D004177 ORTHO05D004826 2.5e-24 115.2 81 71.6
Hma1.2p1_0663F.1_g198701 Hydrangea macrophylla HOM05D004177 ORTHO05D004826 2.5e-24 115.2 71 78.9
QL02p063435 Quercus lobata HOM05D004177 ORTHO05D004826 2.5e-24 115.2 71 78.9
Ah.09g228420 Amaranthus hybridus HOM05D004177 ORTHO05D004826 3.3e-24 114.8 80 70.0
BcaB05g21688 Brassica carinata HOM05D004177 ORTHO05D004826 3.3e-24 114.8 75 74.7
ClCG01G007700 Citrullus lanatus HOM05D004177 ORTHO05D004826 3.3e-24 114.8 75 73.3
ECA233G2252 Erigeron canadensis HOM05D004177 ORTHO05D004826 3.3e-24 114.8 75 73.3
PSO210G7296 Papaver somniferum HOM05D004177 ORTHO05D004826 3.3e-24 114.8 73 76.7
Prupe.7G214500 Prunus persica HOM05D004177 ORTHO05D004826 3.3e-24 114.8 70 80.0
arahy.Tifrunner.gnm1.ann1.H1EJ8W Arachis hypogaea HOM05D004177 ORTHO05D004826 4.3e-24 114.4 71 77.5
arahy.Tifrunner.gnm1.ann1.TIR1N2 Arachis hypogaea HOM05D004177 ORTHO05D004826 4.3e-24 114.4 71 77.5
CsaV3_5G024780 Cucumis sativus L. HOM05D004177 ORTHO05D004826 4.3e-24 114.4 75 73.3
ECA236G1557 Erigeron canadensis HOM05D004177 ORTHO05D004826 4.3e-24 114.4 78 70.5
Lj1g0019759 Lotus japonicus HOM05D004177 ORTHO05D004826 4.3e-24 114.4 71 77.5
Psat7g081120 Pisum sativum HOM05D004177 ORTHO05D004826 4.3e-24 114.4 71 77.5
TPR.G38463 Trifolium pratense HOM05D004177 ORTHO05D004826 4.3e-24 114.4 71 77.5
BraA10t45083Z Brassica rapa HOM05D004177 ORTHO05D004826 5.6e-24 114.0 75 74.7
Gohir.A10G194600 Gossypium hirsutum HOM05D004177 ORTHO05D004826 5.6e-24 114.0 72 75.0
Gohir.D10G201700 Gossypium hirsutum HOM05D004177 ORTHO05D004826 5.6e-24 114.0 72 75.0
Gorai.011G226400 Gossypium raimondii HOM05D004177 ORTHO05D004826 5.6e-24 114.0 72 75.0
Thecc.10G003500 Theobroma cacao HOM05D004177 ORTHO05D004826 5.6e-24 114.0 74 74.3
vmacro00113 Vaccinium macrocarpon HOM05D004177 ORTHO05D004826 5.6e-24 114.0 75 73.3
Actinidia25277 Actinidia chinensis HOM05D004177 ORTHO05D004826 7.4e-24 113.6 69 78.3
CAN.G1014.11 Capsicum annuum HOM05D004177 ORTHO05D004826 7.4e-24 113.6 71 73.2
AUR62031232 Chenopodium quinoa HOM05D004177 ORTHO05D004826 7.4e-24 113.6 71 77.5
Cc06_g10990 Coffea canephora HOM05D004177 ORTHO05D004826 7.4e-24 113.6 71 76.1
DCAR_012005 Daucus carota HOM05D004177 ORTHO05D004826 7.4e-24 113.6 72 75.0
Lalb_Chr24g0393931 Lupinus albus HOM05D004177 ORTHO05D004826 7.4e-24 113.6 71 76.1
Rhsim03G0234600 Rhododendron simsii HOM05D004177 ORTHO05D004826 7.4e-24 113.6 75 73.3
Sc14g0000820 Simmondsia chinensis HOM05D004177 ORTHO05D004826 7.4e-24 113.6 69 81.2
Gohir.D10G201600 Gossypium hirsutum HOM05D004177 ORTHO05D004826 9.6e-24 113.2 74 73.0
Phvul.004G172700 Phaseolus vulgaris HOM05D004177 ORTHO05D004826 9.6e-24 113.2 71 76.1
SalBow6G4427 Salvia bowleyana HOM05D004177 ORTHO05D004826 9.6e-24 113.2 77 74.0
VMungo0464G2175 Vigna mungo HOM05D004177 ORTHO05D004826 9.6e-24 113.2 71 76.1
AL6G15840 Arabidopsis lyrata HOM05D004177 ORTHO05D004826 1.3e-23 112.8 76 72.4
AT5G05920 Arabidopsis thaliana HOM05D004177 ORTHO05D004826 1.3e-23 112.8 76 72.4
A10p30370 Brassica napus HOM05D004177 ORTHO05D004826 1.3e-23 112.8 75 73.3
Thhalv10013870m.g Eutrema salsugineum HOM05D004177 ORTHO05D004826 1.3e-23 112.8 75 73.3
FvH4_1g06830 Fragaria vesca HOM05D004177 ORTHO05D004826 1.3e-23 112.8 76 72.4
FAN19G3030 Fragaria x ananassa HOM05D004177 ORTHO05D004826 1.3e-23 112.8 76 72.4
FAN23G1990 Fragaria x ananassa HOM05D004177 ORTHO05D004826 1.3e-23 112.8 76 72.4
FAN26G2529 Fragaria x ananassa HOM05D004177 ORTHO05D004826 1.3e-23 112.8 78 71.8
Gohir.A10G194500 Gossypium hirsutum HOM05D004177 ORTHO05D004826 1.3e-23 112.8 72 73.6
Gorai.011G226300 Gossypium raimondii HOM05D004177 ORTHO05D004826 1.3e-23 112.8 72 73.6
HanXRQChr09g0263461 Helianthus annuus HOM05D004177 ORTHO05D004826 1.3e-23 112.8 69 79.7
GSVIVG01008468001 Vitis vinifera HOM05D004177 ORTHO05D004826 1.3e-23 112.8 69 79.7
Atru.chr7.1532 Acer truncatum HOM05D004177 ORTHO05D004826 1.6e-23 112.5 69 78.3
Aqoxy2G03855 Aquilegia oxysepala HOM05D004177 ORTHO05D004826 1.6e-23 112.5 73 74.0
AUR62027470 Chenopodium quinoa HOM05D004177 ORTHO05D004826 1.6e-23 112.5 69 76.8
Ca_14076_v3 Cicer arietinum L. HOM05D004177 ORTHO05D004826 1.6e-23 112.5 71 77.5
Solyc02g080800.4 Solanum lycopersicum HOM05D004177 ORTHO05D004826 1.6e-23 112.5 71 73.2
Sopen02g025490 Solanum pennellii HOM05D004177 ORTHO05D004826 1.6e-23 112.5 71 73.2
SGA_v2.0_scaffold62G21577 Striga asiatica HOM05D004177 ORTHO05D004826 1.6e-23 112.5 78 67.9
Actinidia03786 Actinidia chinensis HOM05D004177 ORTHO05D004826 2.1e-23 112.1 75 73.3
Aa31LG11G6950 Aethionema arabicum HOM05D004177 ORTHO05D004826 2.1e-23 112.1 69 79.7
BolC9t59847H Brassica oleracea HOM05D004177 ORTHO05D004826 2.1e-23 112.1 75 73.3
CARHR207300 Cardamine hirsuta HOM05D004177 ORTHO05D004826 2.1e-23 112.1 76 72.4
MELO3C005126.2 Cucumis melo HOM05D004177 ORTHO05D004826 2.1e-23 112.1 67 80.6
Duzib114G0142 Durio zibethinus HOM05D004177 ORTHO05D004826 2.1e-23 112.1 74 74.3
FAN26G0736 Fragaria x ananassa HOM05D004177 ORTHO05D004826 2.1e-23 112.1 69 78.3
Nn6g35409 Nelumbo nucifera HOM05D004177 ORTHO05D004826 2.1e-23 112.1 70 78.6
Actinidia29891 Actinidia chinensis HOM05D004177 ORTHO05D004826 2.8e-23 111.7 75 72.0
PGR142G0935 Punica granatum HOM05D004177 ORTHO05D004826 3.7e-23 111.3 71 74.6
Sp6g36980 Schrenkiella parvula HOM05D004177 ORTHO05D004826 3.7e-23 111.3 73 74.0
HPP92_011031 Vanilla planifolia HOM05D004177 ORTHO05D004826 3.7e-23 111.3 73 75.3
Glyma.07G127600 Glycine max HOM05D004177 ORTHO05D004826 4.8e-23 110.9 71 74.6
BcaC06g32302 Brassica carinata HOM05D004177 ORTHO05D004826 6.2e-23 110.5 69 78.3
C09p70810 Brassica napus HOM05D004177 ORTHO05D004826 6.2e-23 110.5 69 78.3
CDE04G2922 Ceratophyllum demersum HOM05D004177 ORTHO05D004826 6.2e-23 110.5 67 79.1
Nitab4.5_0002695g0050 Nicotiana tabacum HOM05D004177 ORTHO05D004826 6.2e-23 110.5 71 71.8
CANSAT11G0575 Cannabis sativa HOM05D004177 ORTHO05D004826 8.2e-23 110.2 70 75.7
Carub.0006s0480 Capsella rubella HOM05D004177 ORTHO05D004826 8.2e-23 110.2 75 72.0
TPR.G9556 Trifolium pratense HOM05D004177 ORTHO05D004826 8.2e-23 110.2 71 74.6
HPP92_016636 Vanilla planifolia HOM05D004177 ORTHO05D004826 8.2e-23 110.2 67 79.1
Zm00001eb215220 Zea mays HOM05D004177 ORTHO05D004826 8.2e-23 110.2 73 72.6
RcHm_v2.0_Chr2g0092611 Rosa chinensis HOM05D004177 ORTHO05D004826 1.1e-22 109.8 73 71.2
Sed0022999 Sechium edule HOM05D004177 ORTHO05D004826 1.1e-22 109.8 67 79.1
Lsat_1_v5_gn_8_88021 Lactuca sativa HOM05D004177 ORTHO05D004826 1.4e-22 109.4 69 76.8
PSO596G0001 Papaver somniferum HOM05D004177 ORTHO05D004826 1.4e-22 109.4 70 75.7
MELO3C025268.2 Cucumis melo HOM05D004177 ORTHO05D004826 1.8e-22 109.0 69 76.8
MD02G1073000 Malus domestica HOM05D004177 ORTHO05D004826 1.8e-22 109.0 78 71.8
Nitab4.5_0007963g0020 Nicotiana tabacum HOM05D004177 ORTHO05D004826 1.8e-22 109.0 71 70.4
SEGI_08410 Sequoiadendron giganteum HOM05D004177 ORTHO05D004826 1.8e-22 109.0 77 67.5
Peaxi162Scf00178g01719 Petunia axillaris HOM05D004177 ORTHO05D004826 2.4e-22 108.6 69 72.5
SHI02807 Sapria himalayana HOM05D004177 ORTHO05D004826 2.4e-22 108.6 71 70.4
HPP92_001732 Vanilla planifolia HOM05D004177 ORTHO05D004826 5.3e-22 107.5 69 76.8
Eucgr.C00926 Eucalyptus grandis HOM05D004177 ORTHO05D004826 9.0e-22 106.7 69 73.9
ATR0789G091 Amborella trichopoda HOM05D004177 ORTHO05D004826 1.2e-21 106.3 75 70.7
SMO337G0022 Selaginella moellendorffii HOM05D004177 ORTHO05D004826 1.2e-21 106.3 67 73.1
Os03g0740600 Oryza sativa ssp. japonica HOM05D004177 ORTHO05D004826 1.5e-21 105.9 69 73.9
Pp3c2_9490 Physcomitrium patens HOM05D004177 ORTHO05D004826 1.5e-21 105.9 67 73.1
Solyc02g080790.4 Solanum lycopersicum HOM05D004177 ORTHO05D004826 2.6e-21 105.1 72 70.8
Sopen02g025480 Solanum pennellii HOM05D004177 ORTHO05D004826 2.6e-21 105.1 72 70.8
HPP92_014582 Vanilla planifolia HOM05D004177 ORTHO05D004826 2.6e-21 105.1 67 76.1
Zm00001eb085620 Zea mays HOM05D004177 ORTHO05D004826 2.6e-21 105.1 76 67.1
AagrBONN_evm.TU.Sc2ySwM_344.3440 Anthoceros agrestis HOM05D004177 ORTHO05D004826 4.5e-21 104.4 74 67.6
AagrBONN_evm.TU.Sc2ySwM_344.1392 Anthoceros agrestis HOM05D004177 ORTHO05D004826 5.8e-21 104.0 66 74.2
Mapoly0001s0219 Marchantia polymorpha HOM05D004177 ORTHO05D004826 3.8e-20 101.3 67 68.7
Cre08.g369800 Chlamydomonas reinhardtii HOM05D004177 ORTHO05D004826 1.1e-16 89.7 67 61.2
RcHm_v2.0_Chr6g0296851 Rosa chinensis HOM05D004177 ORTHO05D004826 1.5e-16 89.4 68 64.7
Actinidia39745 Actinidia chinensis HOM05D004177 ORTHO05D004826 2.5e-16 88.6 62 69.4
Cre01.g018950 Chlamydomonas reinhardtii HOM05D004177 ORTHO05D004826 4.3e-16 87.8 66 63.6
AagrBONN_evm.TU.Sc2ySwM_362.473 Anthoceros agrestis HOM05D004177 ORTHO05D004826 7.4e-16 87.0 66 66.7
MCO16G096 Micromonas commoda HOM05D004177 ORTHO05D004826 3.7e-15 84.7 66 63.6
HanXRQChr13g0409461 Helianthus annuus HOM05D004177 ORTHO05D004826 4.8e-15 84.3 75 64.0
PRCOL_00001978 Prasinoderma coloniale HOM05D004177 ORTHO05D004826 6.3e-15 84.0 67 61.2
Haze_27186 Corylus avellana HOM05D004177 ORTHO05D004826 4.5e-13 77.8 66 54.5
unitig_27.g24734 Utricularia gibba HOM05D001806 ORTHO05D004826 7.7e-13 77.0 50 72.0
Hund18418 Selenicereus undatus HOM05D004177 ORTHO05D004826 1.0e-12 76.6 49 71.4
Aa31sc206G30 Aethionema arabicum HOM05D005780 ORTHO05D004826 1.1e-11 73.2 48 75.0
HanXRQChr04g0126441 Helianthus annuus HOM05D004177 ORTHO05D004826 1.1e-11 73.2 52 71.2
Os09g0421100 Oryza sativa ssp. japonica HOM05D004177 ORTHO05D004826 3.2e-11 71.6 49 67.3
Haze_25874 Corylus avellana HOM05D004177 ORTHO05D004826 7.2e-11 70.5 44 75.0
vmacro06273 Vaccinium macrocarpon HOM05D004177 ORTHO05D004826 2.1e-10 68.9 43 74.4
SGA_v2.0_scaffold439G51638 Striga asiatica HOM05D004177 ORTHO05D004826 1.8e-06 55.8 37 73.0
Peaxi162Scf00287g00176 Petunia axillaris HOM05D004177 ORTHO05D004826 6.9e-06 53.9 28 82.1


User provided reference genes

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