Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu056100.2 Olea europaea HOM05D003630 ORTHO05D004151 1.7e-58 229.2 120 100.0
Oeu012144.1 Olea europaea HOM05D003630 ORTHO05D004151 9.7e-54 213.4 123 92.7
MSTRG.13203 Avicennia marina HOM05D003630 ORTHO05D004151 2.9e-50 201.8 120 89.2
Migut.M01120 Erythranthe guttata HOM05D003630 ORTHO05D004151 2.3e-47 192.2 124 72.6
Migut.H01476 Erythranthe guttata HOM05D003630 ORTHO05D004151 2.0e-46 189.1 123 79.7
MSTRG.15866 Avicennia marina HOM05D003630 ORTHO05D004151 1.8e-44 182.6 121 79.3
SGA_v2.0_scaffold100G29703 Striga asiatica HOM05D003630 ORTHO05D004151 2.0e-43 179.1 121 79.3
SalBow8G2511 Salvia bowleyana HOM05D003630 ORTHO05D004151 3.4e-43 178.3 121 71.9
CiPaw.10G051200 Carya illinoinensis HOM05D003630 ORTHO05D004151 5.9e-43 177.6 123 78.9
unitig_749.g13657 Utricularia gibba HOM05D003630 ORTHO05D004151 1.3e-42 176.4 122 76.2
Cc02_g13650 Coffea canephora HOM05D003630 ORTHO05D004151 2.2e-42 175.6 126 76.2
Cpa.g.sc373.3 Carica papaya HOM05D003630 ORTHO05D004151 2.9e-42 175.3 121 80.2
Sed0017838 Sechium edule HOM05D003630 ORTHO05D004151 1.2e-40 169.9 122 77.9
Gohir.A05G159800 Gossypium hirsutum HOM05D003630 ORTHO05D004151 2.1e-40 169.1 120 66.7
Oeu029367.1 Olea europaea HOM05D003630 ORTHO05D004151 2.1e-40 169.1 124 75.0
ClCG01G023140 Citrullus lanatus HOM05D003630 ORTHO05D004151 4.7e-40 167.9 122 76.2
Nn1g04163 Nelumbo nucifera HOM05D003630 ORTHO05D004151 7.9e-40 167.2 121 76.0
arahy.Tifrunner.gnm1.ann1.Q5B35H Arachis hypogaea HOM05D003630 ORTHO05D004151 3.0e-39 165.2 122 73.8
TWI38G1513 Tripterygium wilfordii HOM05D003630 ORTHO05D004151 3.0e-39 165.2 120 80.0
CiPaw.09G062300 Carya illinoinensis HOM05D003630 ORTHO05D004151 3.9e-39 164.9 121 74.4
Gohir.D05G162500 Gossypium hirsutum HOM05D003630 ORTHO05D004151 3.9e-39 164.9 120 65.0
GSVIVG01021092001 Vitis vinifera HOM05D003630 ORTHO05D004151 3.3e-38 161.8 120 75.8
ATR0752G193 Amborella trichopoda HOM05D003630 ORTHO05D004151 4.4e-38 161.4 123 66.7
CsaV3_6G050280 Cucumis sativus L. HOM05D003630 ORTHO05D004151 1.7e-37 159.5 122 73.0
arahy.Tifrunner.gnm1.ann1.RY2Y1Z Arachis hypogaea HOM05D003630 ORTHO05D004151 2.2e-37 159.1 122 72.1
QL05p041782 Quercus lobata HOM05D003630 ORTHO05D004151 1.1e-36 156.8 122 70.5
Duzib160G0312 Durio zibethinus HOM05D003630 ORTHO05D004151 1.4e-36 156.4 118 73.7
Sed0024812 Sechium edule HOM05D003630 ORTHO05D004151 1.4e-36 156.4 120 70.8
CSS0035295 Camellia sinensis var. sinensis HOM05D003630 ORTHO05D004151 1.8e-36 156.0 127 74.0
Hma1.2p1_0208F.1_g088370 Hydrangea macrophylla HOM05D003630 ORTHO05D004151 9.1e-36 153.7 126 68.3
Manes.17G047900 Manihot esculenta HOM05D003630 ORTHO05D004151 9.1e-36 153.7 120 72.5
Carub.0001s2678 Capsella rubella HOM05D003630 ORTHO05D004151 1.5e-35 152.9 122 64.8
PGR004G0839 Punica granatum HOM05D003630 ORTHO05D004151 1.5e-35 152.9 125 68.8
TAR624G0603 Trochodendron aralioides HOM05D003630 ORTHO05D004151 2.6e-35 152.1 120 63.3
Actinidia07592 Actinidia chinensis HOM05D003630 ORTHO05D004151 3.5e-35 151.8 124 71.0
Dinv17335 Davidia involucrata HOM05D003630 ORTHO05D004151 2.2e-34 149.1 125 68.0
Prupe.4G050800 Prunus persica HOM05D003630 ORTHO05D004151 2.2e-34 149.1 120 69.2
Solyc02g077880.3 Solanum lycopersicum HOM05D003630 ORTHO05D004151 2.2e-34 149.1 122 67.2
Sopen02g022730 Solanum pennellii HOM05D003630 ORTHO05D004151 2.2e-34 149.1 122 67.2
Solyc03g006360.3 Solanum lycopersicum HOM05D003630 ORTHO05D004151 3.8e-34 148.3 131 64.1
MBI02_g32444_MAGBIO Magnolia biondii HOM05D003630 ORTHO05D004151 5.0e-34 147.9 127 67.7
HanXRQChr04g0123791 Helianthus annuus HOM05D003630 ORTHO05D004151 6.5e-34 147.5 116 69.8
TAR626G1897 Trochodendron aralioides HOM05D003630 ORTHO05D004151 8.5e-34 147.1 121 67.8
Peaxi162Scf01100g00009 Petunia axillaris HOM05D003630 ORTHO05D004151 1.1e-33 146.7 122 66.4
BcaB07g32449 Brassica carinata HOM05D003630 ORTHO05D004151 2.5e-33 145.6 122 63.9
CSS0033873 Camellia sinensis var. sinensis HOM05D003630 ORTHO05D004151 4.2e-33 144.8 108 75.9
MELO3C007269.2 Cucumis melo HOM05D003630 ORTHO05D004151 4.2e-33 144.8 110 74.5
Thecc.06G183500 Theobroma cacao HOM05D003630 ORTHO05D004151 4.2e-33 144.8 109 76.1
RcHm_v2.0_Chr5g0008921 Rosa chinensis HOM05D003630 ORTHO05D004151 5.5e-33 144.4 118 67.8
PGSC0003DMG400029732 Solanum tuberosum HOM05D003630 ORTHO05D004151 5.5e-33 144.4 122 62.3
Thhalv10009086m.g Eutrema salsugineum HOM05D003630 ORTHO05D004151 7.2e-33 144.1 124 62.9
Nitab4.5_0000516g0130 Nicotiana tabacum HOM05D003630 ORTHO05D004151 7.2e-33 144.1 129 65.9
Ah.09g237490 Amaranthus hybridus HOM05D003630 ORTHO05D004151 1.2e-32 143.3 124 68.5
ECA236G4733 Erigeron canadensis HOM05D003630 ORTHO05D004151 1.2e-32 143.3 123 64.2
CiPaw.04G030300 Carya illinoinensis HOM05D003630 ORTHO05D004151 1.6e-32 142.9 109 72.5
arahy.Tifrunner.gnm1.ann1.H8XLFU Arachis hypogaea HOM05D003630 ORTHO05D004151 2.1e-32 142.5 120 70.0
arahy.Tifrunner.gnm1.ann1.S1G93A Arachis hypogaea HOM05D003630 ORTHO05D004151 2.1e-32 142.5 120 70.0
PGR042G3375 Punica granatum HOM05D003630 ORTHO05D004151 2.7e-32 142.1 120 70.8
vmacro15923 Vaccinium macrocarpon HOM05D003630 ORTHO05D004151 2.7e-32 142.1 126 59.5
CANSAT35G1140 Cannabis sativa HOM05D003630 ORTHO05D004151 3.6e-32 141.7 126 65.1
Gohir.A06G129700 Gossypium hirsutum HOM05D003630 ORTHO05D004151 3.6e-32 141.7 119 68.9
Gohir.D06G133900 Gossypium hirsutum HOM05D003630 ORTHO05D004151 3.6e-32 141.7 119 68.9
PGSC0003DMG400012826 Solanum tuberosum HOM05D003630 ORTHO05D004151 4.7e-32 141.4 131 61.8
BcaC05g26841 Brassica carinata HOM05D003630 ORTHO05D004151 6.1e-32 141.0 122 61.5
Potri.004G047100 Populus trichocarpa HOM05D003630 ORTHO05D004151 6.1e-32 141.0 112 68.8
Lalb_Chr09g0327781 Lupinus albus HOM05D003630 ORTHO05D004151 1.0e-31 140.2 121 63.6
Aqoxy1G02347 Aquilegia oxysepala HOM05D003630 ORTHO05D004151 1.4e-31 139.8 120 62.5
Lj6g0013661 Lotus japonicus HOM05D003630 ORTHO05D004151 1.4e-31 139.8 120 66.7
Nitab4.5_0003487g0100 Nicotiana tabacum HOM05D003630 ORTHO05D004151 1.4e-31 139.8 127 66.1
FAN16G2355 Fragaria x ananassa HOM05D003630 ORTHO05D004151 2.3e-31 139.0 118 66.9
FAN25G0655 Fragaria x ananassa HOM05D003630 ORTHO05D004151 2.3e-31 139.0 118 66.9
Dinv40586 Davidia involucrata HOM05D003630 ORTHO05D004151 3.0e-31 138.7 111 72.1
Lsat_1_v5_gn_7_20981 Lactuca sativa HOM05D003630 ORTHO05D004151 3.0e-31 138.7 110 70.9
CSS0037340 Camellia sinensis var. sinensis HOM05D003630 ORTHO05D004151 3.9e-31 138.3 111 73.0
FAN21G0750 Fragaria x ananassa HOM05D003630 ORTHO05D004151 5.2e-31 137.9 119 68.1
CDE11G0243 Ceratophyllum demersum HOM05D003630 ORTHO05D004151 6.7e-31 137.5 121 64.5
VMungo0540G1118 Vigna mungo HOM05D003630 ORTHO05D004151 8.8e-31 137.1 122 66.4
Sed0001316 Sechium edule HOM05D003630 ORTHO05D004151 1.5e-30 136.3 118 57.6
TWI38G1867 Tripterygium wilfordii HOM05D003630 ORTHO05D004151 1.5e-30 136.3 108 72.2
FvH4_3g08830 Fragaria vesca HOM05D003630 ORTHO05D004151 2.6e-30 135.6 119 66.4
FAN11G3953 Fragaria x ananassa HOM05D003630 ORTHO05D004151 2.6e-30 135.6 119 66.4
Ca_00350_v3 Cicer arietinum L. HOM05D003630 ORTHO05D004151 3.3e-30 135.2 118 63.6
HPP92_018480 Vanilla planifolia HOM05D003630 ORTHO05D004151 3.3e-30 135.2 125 61.6
Os11g0671000 Oryza sativa ssp. japonica HOM05D003630 ORTHO05D004151 4.4e-30 134.8 126 65.1
HPP92_018482 Vanilla planifolia HOM05D003630 ORTHO05D004151 4.4e-30 134.8 125 61.6
CDE05G2086 Ceratophyllum demersum HOM05D003630 ORTHO05D004151 5.7e-30 134.4 121 61.2
HPP92_014190 Vanilla planifolia HOM05D003630 ORTHO05D004151 7.4e-30 134.0 120 55.8
Manes.16G030000 Manihot esculenta HOM05D003630 ORTHO05D004151 9.7e-30 133.7 107 72.0
AL1G41920 Arabidopsis lyrata HOM05D003630 ORTHO05D004151 1.7e-29 132.9 120 60.0
DCAR_003387 Daucus carota HOM05D003630 ORTHO05D004151 1.7e-29 132.9 119 61.3
Phvul.006G183600 Phaseolus vulgaris HOM05D003630 ORTHO05D004151 1.7e-29 132.9 122 64.8
AT1G28330 Arabidopsis thaliana HOM05D003630 ORTHO05D004151 2.8e-29 132.1 111 62.2
Cfa000510 Carpinus fangiana HOM05D003630 ORTHO05D004151 2.8e-29 132.1 111 69.4
AUR62014851 Chenopodium quinoa HOM05D003630 ORTHO05D004151 2.8e-29 132.1 125 64.8
THA.LOC104814224 Tarenaya hassleriana HOM05D003630 ORTHO05D004151 2.8e-29 132.1 111 64.9
ClCG03G008090 Citrullus lanatus HOM05D003630 ORTHO05D004151 3.7e-29 131.7 118 61.9
Lalb_Chr15g0089711 Lupinus albus HOM05D003630 ORTHO05D004151 3.7e-29 131.7 118 65.3
Medtr2g014240 Medicago truncatula HOM05D003630 ORTHO05D004151 3.7e-29 131.7 118 63.6
Duzib235G1039 Durio zibethinus HOM05D003630 ORTHO05D004151 1.4e-28 129.8 111 69.4
Gorai.009G167500 Gossypium raimondii HOM05D003630 ORTHO05D004151 1.8e-28 129.4 101 60.4
Lalb_Chr18g0059451 Lupinus albus HOM05D003630 ORTHO05D004151 1.8e-28 129.4 121 66.1
TPR.G16501 Trifolium pratense HOM05D003630 ORTHO05D004151 1.8e-28 129.4 118 64.4
AUR62017046 Chenopodium quinoa HOM05D003630 ORTHO05D004151 2.4e-28 129.0 125 63.2
MELO3C002620.2 Cucumis melo HOM05D003630 ORTHO05D004151 2.4e-28 129.0 118 61.0
CsaV3_1G012460 Cucumis sativus L. HOM05D003630 ORTHO05D004151 2.4e-28 129.0 118 61.0
Glyma.13G237000 Glycine max HOM05D003630 ORTHO05D004151 2.4e-28 129.0 122 63.1
EL10Ac8g20421 Beta vulgaris HOM05D003630 ORTHO05D004151 7.0e-28 127.5 128 61.7
Sp1g24570 Schrenkiella parvula HOM05D003630 ORTHO05D004151 9.1e-28 127.1 109 64.2
COL.COLO4_31436 Corchorus olitorius HOM05D003630 ORTHO05D004151 1.2e-27 126.7 122 65.6
Haze_06402 Corylus avellana HOM05D003630 ORTHO05D004151 1.2e-27 126.7 112 67.0
Ciclev10017162m.g Citrus clementina HOM05D003630 ORTHO05D004151 1.6e-27 126.3 110 70.0
Atru.chr10.1820 Acer truncatum HOM05D003630 ORTHO05D004151 4.5e-27 124.8 111 68.5
Atru.chr10.1837 Acer truncatum HOM05D003630 ORTHO05D004151 4.5e-27 124.8 111 68.5
CARHR027820 Cardamine hirsuta HOM05D003630 ORTHO05D004151 5.9e-27 124.4 121 58.7
BcaC02g11461 Brassica carinata HOM05D003630 ORTHO05D004151 1.3e-26 123.2 116 52.6
Glyma.15G076500 Glycine max HOM05D003630 ORTHO05D004151 1.7e-26 122.9 120 60.0
HanXRQChr01g0003821 Helianthus annuus HOM05D003630 ORTHO05D004151 1.7e-26 122.9 120 59.2
Aa31sc86G60 Aethionema arabicum HOM05D003630 ORTHO05D004151 2.2e-26 122.5 109 55.0
A09p37730 Brassica napus HOM05D003630 ORTHO05D004151 2.2e-26 122.5 120 57.5
C04p15210 Brassica napus HOM05D003630 ORTHO05D004151 2.2e-26 122.5 116 52.6
C05p27220 Brassica napus HOM05D003630 ORTHO05D004151 2.2e-26 122.5 120 57.5
BolC4t23094H Brassica oleracea HOM05D003630 ORTHO05D004151 2.2e-26 122.5 116 52.6
BraA09t39285Z Brassica rapa HOM05D003630 ORTHO05D004151 2.2e-26 122.5 120 57.5
Rhsim02G0132700 Rhododendron simsii HOM05D003630 ORTHO05D004151 3.8e-26 121.7 114 55.3
Carub.0004s1550 Capsella rubella HOM05D003630 ORTHO05D004151 5.0e-26 121.3 116 55.2
A05p11750 Brassica napus HOM05D003630 ORTHO05D004151 6.5e-26 120.9 116 51.7
BraA05t20119Z Brassica rapa HOM05D003630 ORTHO05D004151 6.5e-26 120.9 116 51.7
Sp4g16220 Schrenkiella parvula HOM05D003630 ORTHO05D004151 6.5e-26 120.9 116 53.4
AT2G33830 Arabidopsis thaliana HOM05D003630 ORTHO05D004151 8.5e-26 120.6 116 54.3
BcaB02g10597 Brassica carinata HOM05D003630 ORTHO05D004151 8.5e-26 120.6 116 50.9
A03p18920 Brassica napus HOM05D003630 ORTHO05D004151 8.5e-26 120.6 118 53.4
Gorai.010G155600 Gossypium raimondii HOM05D003630 ORTHO05D004151 8.5e-26 120.6 109 66.1
BcaB01g03917 Brassica carinata HOM05D003630 ORTHO05D004151 1.5e-25 119.8 116 54.3
BcaC01g05821 Brassica carinata HOM05D003630 ORTHO05D004151 1.5e-25 119.8 116 54.3
BcaC01g05822 Brassica carinata HOM05D003630 ORTHO05D004151 1.5e-25 119.8 116 54.3
BraA03t11151Z Brassica rapa HOM05D003630 ORTHO05D004151 1.5e-25 119.8 116 54.3
Aa31sc652G110 Aethionema arabicum HOM05D003630 ORTHO05D004151 3.2e-25 118.6 116 53.4
Aa31sc652G20 Aethionema arabicum HOM05D003630 ORTHO05D004151 3.2e-25 118.6 116 53.4
Sopen03g002370 Solanum pennellii HOM05D003630 ORTHO05D004151 4.2e-25 118.2 127 58.3
AL4G29600 Arabidopsis lyrata HOM05D003630 ORTHO05D004151 5.5e-25 117.9 114 53.5
BolC5t31435H Brassica oleracea HOM05D003630 ORTHO05D004151 5.5e-25 117.9 120 55.0
SEGI_31386 Sequoiadendron giganteum HOM05D003630 ORTHO05D004151 5.5e-25 117.9 137 53.3
Sabra04G0029500 Salix brachista HOM05D003630 ORTHO05D004151 9.4e-25 117.1 115 60.9
BraA02t07868Z Brassica rapa HOM05D003630 ORTHO05D004151 1.2e-24 116.7 122 50.8
A02p28330 Brassica napus HOM05D003630 ORTHO05D004151 2.7e-24 115.5 122 50.8
C02p44910 Brassica napus HOM05D003630 ORTHO05D004151 2.7e-24 115.5 122 50.0
BolC2t10526H Brassica oleracea HOM05D003630 ORTHO05D004151 2.7e-24 115.5 122 50.0
BolC3t14590H Brassica oleracea HOM05D003630 ORTHO05D004151 3.6e-24 115.2 116 52.6
Thhalv10017461m.g Eutrema salsugineum HOM05D003630 ORTHO05D004151 6.1e-24 114.4 116 52.6
AT5G44300 Arabidopsis thaliana HOM05D003630 ORTHO05D004151 8.0e-24 114.0 122 50.8
Thhalv10003427m.g Eutrema salsugineum HOM05D003630 ORTHO05D004151 8.0e-24 114.0 127 49.6
THA.LOC104812301 Tarenaya hassleriana HOM05D003630 ORTHO05D004151 1.0e-23 113.6 121 59.5
PSO541G4117 Papaver somniferum HOM05D003630 ORTHO05D004151 1.8e-23 112.8 130 53.1
AL8G15690 Arabidopsis lyrata HOM05D003630 ORTHO05D004151 4.0e-23 111.7 122 50.0
Carub.0008s0422 Capsella rubella HOM05D003630 ORTHO05D004151 4.0e-23 111.7 122 47.5
Sp2g09130 Schrenkiella parvula HOM05D003630 ORTHO05D004151 4.0e-23 111.7 122 49.2
Psat1g203680 Pisum sativum HOM05D003630 ORTHO05D004151 1.5e-22 109.8 106 61.3
DCAR_008021 Daucus carota HOM05D003630 ORTHO05D004151 2.0e-22 109.4 126 56.3
Aa31LG9G8870 Aethionema arabicum HOM05D003630 ORTHO05D004151 2.6e-22 109.0 122 46.7
CARHR127940 Cardamine hirsuta HOM05D003630 ORTHO05D004151 2.6e-22 109.0 114 49.1
PSO675G3190 Papaver somniferum HOM05D003630 ORTHO05D004151 5.7e-22 107.8 127 50.4
Sc24g0001020 Simmondsia chinensis HOM05D003630 ORTHO05D004151 3.7e-21 105.1 110 55.5
CARHR178890 Cardamine hirsuta HOM05D003630 ORTHO05D004151 6.3e-21 104.4 124 52.4
Sed0007569 Sechium edule HOM05D003630 ORTHO05D004151 3.1e-20 102.1 106 52.8
Lsat_1_v5_gn_1_124360 Lactuca sativa HOM05D003630 ORTHO05D004151 7.0e-20 100.9 104 51.0
Pp3c15_6160 Physcomitrium patens HOM05D003630 ORTHO05D004151 4.5e-19 98.2 150 38.7
C03p22060 Brassica napus HOM05D003630 ORTHO05D004151 7.7e-19 97.4 104 50.0
BcaC03g16649 Brassica carinata HOM05D003630 ORTHO05D004151 2.9e-18 95.5 110 46.4
ECA248G1596 Erigeron canadensis HOM05D000885 ORTHO05D008875 2.9e-18 95.5 82 65.9
SMO367G0919 Selaginella moellendorffii HOM05D003630 ORTHO05D004151 1.5e-17 93.2 118 45.8
SMO343G0126 Selaginella moellendorffii HOM05D003630 ORTHO05D004151 5.5e-17 91.3 157 37.6
CAN.G529.26 Capsicum annuum HOM05D003630 ORTHO05D004151 7.2e-17 90.9 55 76.4
MD14G1054500 Malus domestica HOM05D003630 ORTHO05D004151 2.1e-16 89.4 99 51.5
BcaB07g30534 Brassica carinata HOM05D003630 ORTHO05D004151 2.0e-14 82.8 106 44.3
Sc17g0006070 Simmondsia chinensis HOM05D003630 ORTHO05D004151 2.6e-14 82.4 111 50.5
AagrBONN_evm.TU.Sc2ySwM_228.5600 Anthoceros agrestis HOM05D003630 ORTHO05D004151 6.3e-13 77.8 150 34.0
Mapoly0057s0054 Marchantia polymorpha HOM05D003630 ORTHO05D004151 3.1e-12 75.5 141 35.5
Pp3c10_24000 Physcomitrium patens HOM05D003630 ORTHO05D004151 1.7e-10 69.7 159 32.7
Pp3c20_21690 Physcomitrium patens HOM05D003630 ORTHO05D004151 2.5e-09 65.9 155 30.3
Pp3c23_13750 Physcomitrium patens HOM05D003630 ORTHO05D004151 4.2e-09 65.1 164 31.1
Aa31LG9G7730 Aethionema arabicum HOM05D003630 ORTHO05D004151 3.6e-08 62.0 62 50.0
AagrBONN_evm.TU.Sc2ySwM_362.1976 Anthoceros agrestis HOM05D003630 ORTHO05D004151 4.7e-08 61.6 44 56.8
COL.COLO4_29750 Corchorus olitorius HOM05D003630 ORTHO05D004151 8.0e-08 60.8 42 71.4
MD05G1311800 Malus domestica HOM05D003630 ORTHO05D004151 2.3e-07 59.3 38 68.4
MBI19_g38000_MAGBIO Magnolia biondii HOM05D002144 ORTHO05D002170 3.0e-07 58.9 135 31.9
Eucgr.E03257 Eucalyptus grandis HOM05D003630 ORTHO05D004151 2.0e-06 56.2 44 59.1
PGR102G1253 Punica granatum HOM05D002144 ORTHO05D002170 2.6e-06 55.8 113 31.9


User provided reference genes

Program Settings