Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu055966.1 Olea europaea HOM05D007077 ORTHO05D008853 3.1e-59 231.5 107 100.0
MSTRG.10653 Avicennia marina HOM05D007077 ORTHO05D008853 2.1e-39 165.6 107 67.3
SalBow6G6978 Salvia bowleyana HOM05D007077 ORTHO05D008853 1.3e-38 162.9 100 71.0
Migut.K00414 Erythranthe guttata HOM05D007077 ORTHO05D008853 6.6e-38 160.6 107 65.4
SGA_v2.0_scaffold51G18726 Striga asiatica HOM05D007077 ORTHO05D008853 1.5e-34 149.4 107 60.7
Nitab4.5_0000167g0170 Nicotiana tabacum HOM05D007077 ORTHO05D008853 5.1e-30 134.4 95 61.1
TAR636G1135 Trochodendron aralioides HOM05D007077 ORTHO05D008853 5.1e-30 134.4 108 60.2
Peaxi162Scf01013g00228 Petunia axillaris HOM05D007077 ORTHO05D008853 3.3e-29 131.7 98 59.2
CAN.G307.7 Capsicum annuum HOM05D007077 ORTHO05D008853 4.3e-29 131.3 98 58.2
Actinidia07437 Actinidia chinensis HOM05D007077 ORTHO05D008853 7.3e-29 130.6 109 59.6
Sopen03g004510 Solanum pennellii HOM05D007077 ORTHO05D008853 7.3e-29 130.6 98 56.1
Solyc03g025690.4 Solanum lycopersicum HOM05D007077 ORTHO05D008853 9.6e-29 130.2 98 56.1
vmacro06174 Vaccinium macrocarpon HOM05D007077 ORTHO05D008853 3.1e-27 125.2 105 57.1
Dinv36561 Davidia involucrata HOM05D007077 ORTHO05D008853 6.9e-27 124.0 102 57.8
Cc09_g03400 Coffea canephora HOM05D007077 ORTHO05D008853 9.0e-27 123.6 75 66.7
MBI04_g10421_MAGBIO Magnolia biondii HOM05D007077 ORTHO05D008853 9.0e-27 123.6 107 56.1
GSVIVG01035379001 Vitis vinifera HOM05D007077 ORTHO05D008853 1.5e-26 122.9 106 59.4
Atru.chr7.1226 Acer truncatum HOM05D007077 ORTHO05D008853 2.6e-26 122.1 97 57.7
Prupe.7G238900 Prunus persica HOM05D007077 ORTHO05D008853 4.5e-26 121.3 103 52.4
Rhsim03G0246400 Rhododendron simsii HOM05D007077 ORTHO05D008853 5.8e-26 120.9 105 55.2
Thecc.09G122000 Theobroma cacao HOM05D007077 ORTHO05D008853 7.6e-26 120.6 103 51.5
TWI63G0911 Tripterygium wilfordii HOM05D007077 ORTHO05D008853 2.9e-25 118.6 105 54.3
BolC6t38404H Brassica oleracea HOM05D007077 ORTHO05D008853 4.9e-25 117.9 99 53.5
COL.COLO4_35188 Corchorus olitorius HOM05D007077 ORTHO05D008853 4.9e-25 117.9 101 54.5
CSS0046716 Camellia sinensis var. sinensis HOM05D007077 ORTHO05D008853 6.4e-25 117.5 104 53.8
CiPaw.03G240800 Carya illinoinensis HOM05D007077 ORTHO05D008853 6.4e-25 117.5 103 52.4
FvH4_1g03790 Fragaria vesca HOM05D007077 ORTHO05D008853 6.4e-25 117.5 103 51.5
FAN19G1922 Fragaria x ananassa HOM05D007077 ORTHO05D008853 6.4e-25 117.5 103 51.5
BcaB02g06994 Brassica carinata HOM05D007077 ORTHO05D008853 8.4e-25 117.1 99 52.5
C06p32830 Brassica napus HOM05D007077 ORTHO05D008853 8.4e-25 117.1 99 52.5
FAN23G2971 Fragaria x ananassa HOM05D007077 ORTHO05D008853 8.4e-25 117.1 103 51.5
FAN26G2340 Fragaria x ananassa HOM05D007077 ORTHO05D008853 8.4e-25 117.1 103 51.5
Cpa.g.sc75.76 Carica papaya HOM05D007077 ORTHO05D008853 1.1e-24 116.7 97 59.8
A07p29070 Brassica napus HOM05D007077 ORTHO05D008853 1.4e-24 116.3 99 51.5
COL.COLO4_05999 Corchorus olitorius HOM05D007077 ORTHO05D008853 1.4e-24 116.3 108 51.9
Eucgr.C04175 Eucalyptus grandis HOM05D007077 ORTHO05D008853 1.4e-24 116.3 103 50.5
Gorai.009G019800 Gossypium raimondii HOM05D007077 ORTHO05D008853 1.4e-24 116.3 103 50.5
Duzib168G0686 Durio zibethinus HOM05D007077 ORTHO05D008853 1.9e-24 115.9 103 51.5
Manes.06G053400 Manihot esculenta HOM05D007077 ORTHO05D008853 2.4e-24 115.5 103 53.4
Sp5g30250 Schrenkiella parvula HOM05D007077 ORTHO05D008853 2.4e-24 115.5 96 55.2
RcHm_v2.0_Chr2g0089201 Rosa chinensis HOM05D007077 ORTHO05D008853 3.2e-24 115.2 86 58.1
BcaB05g24885 Brassica carinata HOM05D007077 ORTHO05D008853 4.2e-24 114.8 102 57.8
Gohir.A05G018500 Gossypium hirsutum HOM05D007077 ORTHO05D008853 4.2e-24 114.8 103 49.5
Gohir.D05G019400 Gossypium hirsutum HOM05D007077 ORTHO05D008853 4.2e-24 114.8 103 50.5
Potri.003G137900 Populus trichocarpa HOM05D007077 ORTHO05D008853 4.2e-24 114.8 104 53.8
MD02G1036500 Malus domestica HOM05D007077 ORTHO05D008853 5.4e-24 114.4 101 51.5
Duzib150G1251 Durio zibethinus HOM05D007077 ORTHO05D008853 7.1e-24 114.0 103 50.5
Thhalv10019349m.g Eutrema salsugineum HOM05D007077 ORTHO05D008853 7.1e-24 114.0 96 53.1
Os01g0612800 Oryza sativa ssp. japonica HOM05D007077 ORTHO05D008853 7.1e-24 114.0 98 54.1
Pp3c10_2110 Physcomitrium patens HOM05D007077 ORTHO05D008853 7.1e-24 114.0 110 51.8
CDE06G0710 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 9.3e-24 113.6 105 52.4
AL2G35020 Arabidopsis lyrata HOM05D007077 ORTHO05D008853 1.2e-23 113.2 96 55.2
Carub.0002s2191 Capsella rubella HOM05D007077 ORTHO05D008853 1.2e-23 113.2 96 54.2
Aa31LG4G5320 Aethionema arabicum HOM05D007077 ORTHO05D008853 1.6e-23 112.8 101 51.5
BcaB02g07008 Brassica carinata HOM05D007077 ORTHO05D008853 2.1e-23 112.5 100 50.0
CSS0033721 Camellia sinensis var. sinensis HOM05D007077 ORTHO05D008853 2.1e-23 112.5 87 57.5
QL02p087620 Quercus lobata HOM05D007077 ORTHO05D008853 2.1e-23 112.5 103 48.5
Actinidia26405 Actinidia chinensis HOM05D007077 ORTHO05D008853 2.7e-23 112.1 68 69.1
Psat4g041880 Pisum sativum HOM05D007077 ORTHO05D008853 2.7e-23 112.1 110 49.1
Sabra03G0099300 Salix brachista HOM05D007077 ORTHO05D008853 2.7e-23 112.1 104 52.9
AT1G75125 Arabidopsis thaliana HOM05D007077 ORTHO05D008853 3.5e-23 111.7 96 55.2
Sed0015086 Sechium edule HOM05D007077 ORTHO05D008853 3.5e-23 111.7 103 53.4
CARHR068440 Cardamine hirsuta HOM05D007077 ORTHO05D008853 4.6e-23 111.3 96 54.2
CARHR068450 Cardamine hirsuta HOM05D007077 ORTHO05D008853 4.6e-23 111.3 94 54.3
Lj4g0023379 Lotus japonicus HOM05D007077 ORTHO05D008853 7.9e-23 110.5 103 49.5
THA.LOC104826537 Tarenaya hassleriana HOM05D007077 ORTHO05D008853 7.9e-23 110.5 92 56.5
Lalb_Chr07g0178761 Lupinus albus HOM05D007077 ORTHO05D008853 1.0e-22 110.2 92 52.2
PGR102G1835 Punica granatum HOM05D007077 ORTHO05D008853 1.0e-22 110.2 68 66.2
Medtr4g113750 Medicago truncatula HOM05D007077 ORTHO05D008853 1.3e-22 109.8 110 49.1
arahy.Tifrunner.gnm1.ann1.7ZPA8Y Arachis hypogaea HOM05D007077 ORTHO05D008853 1.8e-22 109.4 102 52.0
arahy.Tifrunner.gnm1.ann1.BTXG8Q Arachis hypogaea HOM05D007077 ORTHO05D008853 1.8e-22 109.4 102 52.0
PGSC0003DMG400014298 Solanum tuberosum HOM05D007077 ORTHO05D008853 2.3e-22 109.0 82 53.7
Phvul.003G162000 Phaseolus vulgaris HOM05D007077 ORTHO05D008853 3.9e-22 108.2 102 51.0
Hma1.2p1_0665F.1_g199210 Hydrangea macrophylla HOM05D007077 ORTHO05D008853 5.1e-22 107.8 62 67.7
VMungo1215G0506 Vigna mungo HOM05D007077 ORTHO05D008853 1.5e-21 106.3 102 51.0
CDE07G1647 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 1.9e-21 105.9 66 68.2
Glyma.05G009400 Glycine max HOM05D007077 ORTHO05D008853 3.3e-21 105.1 101 48.5
Mapoly0015s0040 Marchantia polymorpha HOM05D007077 ORTHO05D008853 3.3e-21 105.1 105 47.6
Ah.05g167190 Amaranthus hybridus HOM05D007077 ORTHO05D008853 4.3e-21 104.8 93 50.5
Phvul.003G161700 Phaseolus vulgaris HOM05D007077 ORTHO05D008853 4.3e-21 104.8 104 49.0
CDE07G0486 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 5.6e-21 104.4 66 66.7
TPR.G10683 Trifolium pratense HOM05D007077 ORTHO05D008853 7.4e-21 104.0 110 44.5
Nitab4.5_0001579g0110 Nicotiana tabacum HOM05D007077 ORTHO05D008853 9.6e-21 103.6 103 45.6
Glyma.17G117400 Glycine max HOM05D007077 ORTHO05D008853 1.3e-20 103.2 101 46.5
BraA07t30546Z Brassica rapa HOM05D007077 ORTHO05D008853 4.8e-20 101.3 99 46.5
Ciclev10010021m.g Citrus clementina HOM05D007077 ORTHO05D008853 4.8e-20 101.3 85 55.3
CsaV3_2G002680 Cucumis sativus L. HOM05D007077 ORTHO05D008853 8.1e-20 100.5 103 47.6
BcaC03g15541 Brassica carinata HOM05D007077 ORTHO05D008853 2.4e-19 99.0 95 50.5
BolC2t09261H Brassica oleracea HOM05D007077 ORTHO05D008853 2.4e-19 99.0 95 50.5
HanXRQChr01g0017151 Helianthus annuus HOM05D007077 ORTHO05D008853 9.0e-19 97.1 107 43.9
Lsat_1_v5_gn_5_98981 Lactuca sativa HOM05D007077 ORTHO05D008853 2.0e-18 95.9 97 45.4
A02p19700 Brassica napus HOM05D007077 ORTHO05D008853 2.2e-17 92.4 89 50.6
BraA02t07006Z Brassica rapa HOM05D007077 ORTHO05D008853 2.2e-17 92.4 89 50.6
Hund09149 Selenicereus undatus HOM05D007077 ORTHO05D008853 4.9e-17 91.3 96 49.0
GSVIVG01015495001 Vitis vinifera HOM05D007077 ORTHO05D008853 8.4e-17 90.5 46 76.1
SMO137G0334 Selaginella moellendorffii HOM05D007077 ORTHO05D008853 1.1e-16 90.1 95 47.4
HanXRQChr12g0356451 Helianthus annuus HOM05D007077 ORTHO05D008853 1.9e-16 89.4 111 40.5
AagrBONN_evm.TU.Sc2ySwM_368.923 Anthoceros agrestis HOM05D007077 ORTHO05D008853 2.4e-16 89.0 101 41.6
ClCG11G002840 Citrullus lanatus HOM05D007077 ORTHO05D008853 2.4e-16 89.0 122 40.2
Haze_25634 Corylus avellana HOM05D007077 ORTHO05D008853 4.2e-16 88.2 96 45.8
QL05p072824 Quercus lobata HOM05D003311 ORTHO05D008853 4.6e-15 84.7 83 48.2
QL02p031889 Quercus lobata HOM05D007077 ORTHO05D008853 6.0e-15 84.3 100 41.0
QL93p2004_0148 Quercus lobata HOM05D007077 ORTHO05D008853 6.0e-15 84.3 100 41.0
Sed0025696 Sechium edule HOM05D007077 ORTHO05D008853 7.9e-15 84.0 90 45.6
Manes.14G129700 Manihot esculenta HOM05D007077 ORTHO05D008853 1.0e-14 83.6 90 46.7
EL10Ac8g18603 Beta vulgaris HOM05D007077 ORTHO05D008853 5.1e-14 81.3 74 50.0
C02p32320 Brassica napus HOM05D007077 ORTHO05D008853 1.4e-11 73.2 44 65.9
CBR_g10839 Chara braunii HOM05D001161 ORTHO05D000497 2.4e-11 72.4 98 35.7
MELO3C031577.2 Cucumis melo HOM05D007077 ORTHO05D008853 1.2e-07 60.1 91 36.3


User provided reference genes

Program Settings