Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu055890.1 Olea europaea HOM05D003429 ORTHO05D003873 7.4e-95 350.5 175 100.0
GSVIVG01012453001 Vitis vinifera HOM05D003429 ORTHO05D003873 2.6e-76 288.9 159 88.1
Dinv03754 Davidia involucrata HOM05D003429 ORTHO05D003873 3.4e-76 288.5 159 88.7
Dinv04984 Davidia involucrata HOM05D003429 ORTHO05D003873 3.4e-76 288.5 159 88.7
ECA248G1206 Erigeron canadensis HOM05D003429 ORTHO05D003873 3.4e-76 288.5 159 88.7
Cfa010982 Carpinus fangiana HOM05D003429 ORTHO05D003873 5.9e-76 287.7 160 86.2
Nn7g37083 Nelumbo nucifera HOM05D003429 ORTHO05D003873 5.9e-76 287.7 159 86.8
Gohir.A10G192300 Gossypium hirsutum HOM05D003429 ORTHO05D003873 7.7e-76 287.3 160 85.0
Lsat_1_v5_gn_1_118001 Lactuca sativa HOM05D003429 ORTHO05D003873 1.3e-75 286.6 159 87.4
TAR629G1055 Trochodendron aralioides HOM05D003429 ORTHO05D003873 1.3e-75 286.6 159 86.8
Gorai.011G224400 Gossypium raimondii HOM05D003429 ORTHO05D003873 2.2e-75 285.8 160 84.4
HanXRQChr16g0510451 Helianthus annuus HOM05D003429 ORTHO05D003873 2.2e-75 285.8 159 86.8
PGR031G2936 Punica granatum HOM05D003429 ORTHO05D003873 2.2e-75 285.8 159 86.8
Eucgr.G03181 Eucalyptus grandis HOM05D003429 ORTHO05D003873 3.8e-75 285.0 159 85.5
MSTRG.20488 Avicennia marina HOM05D003429 ORTHO05D003873 8.5e-75 283.9 159 86.2
Duzib114G0344 Durio zibethinus HOM05D003429 ORTHO05D003873 8.5e-75 283.9 159 84.9
Gohir.D10G200200 Gossypium hirsutum HOM05D003429 ORTHO05D003873 8.5e-75 283.9 160 83.8
Prupe.2G050900 Prunus persica HOM05D003429 ORTHO05D003873 8.5e-75 283.9 159 86.2
Prupe.2G051400 Prunus persica HOM05D003429 ORTHO05D003873 8.5e-75 283.9 159 86.2
RcHm_v2.0_Chr1g0329811 Rosa chinensis HOM05D003429 ORTHO05D003873 1.1e-74 283.5 159 86.2
Manes.04G153600 Manihot esculenta HOM05D003429 ORTHO05D003873 1.4e-74 283.1 159 84.9
Thecc.10G129100 Theobroma cacao HOM05D003429 ORTHO05D003873 1.4e-74 283.1 159 84.9
FAN06G0150 Fragaria x ananassa HOM05D003429 ORTHO05D003873 1.9e-74 282.7 159 85.5
FAN06G3547 Fragaria x ananassa HOM05D003429 ORTHO05D003873 1.9e-74 282.7 159 85.5
Sc09g0004760 Simmondsia chinensis HOM05D003429 ORTHO05D003873 2.5e-74 282.3 159 86.2
QL04p022427 Quercus lobata HOM05D003429 ORTHO05D003873 3.2e-74 282.0 159 84.9
CiPaw.13G018300 Carya illinoinensis HOM05D003429 ORTHO05D003873 5.5e-74 281.2 159 84.9
Glyma.04G003000 Glycine max HOM05D003429 ORTHO05D003873 5.5e-74 281.2 159 83.6
Duzib128G2024 Durio zibethinus HOM05D003429 ORTHO05D003873 7.2e-74 280.8 160 83.8
FvH4_7g04530 Fragaria vesca HOM05D003429 ORTHO05D003873 7.2e-74 280.8 159 85.5
Cc00_g07020 Coffea canephora HOM05D003429 ORTHO05D003873 9.4e-74 280.4 159 84.9
Migut.B01173 Erythranthe guttata HOM05D003429 ORTHO05D003873 9.4e-74 280.4 159 85.5
Glyma.06G003000 Glycine max HOM05D003429 ORTHO05D003873 9.4e-74 280.4 159 83.6
CANSAT56G3732 Cannabis sativa HOM05D003429 ORTHO05D003873 2.7e-73 278.9 159 84.3
AUR62041296 Chenopodium quinoa HOM05D003429 ORTHO05D003873 2.7e-73 278.9 159 84.9
Potri.003G189500 Populus trichocarpa HOM05D003429 ORTHO05D003873 2.7e-73 278.9 159 84.3
Phvul.009G118700 Phaseolus vulgaris HOM05D003429 ORTHO05D003873 3.6e-73 278.5 159 82.4
MD02G1207800 Malus domestica HOM05D003429 ORTHO05D003873 4.7e-73 278.1 159 83.6
Manes.11G010000 Manihot esculenta HOM05D003429 ORTHO05D003873 4.7e-73 278.1 159 83.6
Potri.001G036100 Populus trichocarpa HOM05D003429 ORTHO05D003873 4.7e-73 278.1 159 83.0
SGA_v2.0_scaffold164G38141 Striga asiatica HOM05D003429 ORTHO05D003873 4.7e-73 278.1 159 84.3
FAN03G0932 Fragaria x ananassa HOM05D003429 ORTHO05D003873 6.1e-73 277.7 159 84.3
arahy.Tifrunner.gnm1.ann1.P7SNS1 Arachis hypogaea HOM05D003429 ORTHO05D003873 1.0e-72 276.9 159 82.4
MELO3C011384.2 Cucumis melo HOM05D003429 ORTHO05D003873 1.0e-72 276.9 159 84.3
CsaV3_6G035760 Cucumis sativus L. HOM05D003429 ORTHO05D003873 1.0e-72 276.9 159 84.3
FAN01G2134 Fragaria x ananassa HOM05D003429 ORTHO05D003873 1.0e-72 276.9 159 84.3
MD07G1118000 Malus domestica HOM05D003429 ORTHO05D003873 1.0e-72 276.9 159 83.0
Sabra01G0025100 Salix brachista HOM05D003429 ORTHO05D003873 1.0e-72 276.9 159 82.4
Hund06843 Selenicereus undatus HOM05D003429 ORTHO05D003873 1.0e-72 276.9 159 84.3
Ciclev10000149m.g Citrus clementina HOM05D003429 ORTHO05D003873 1.4e-72 276.6 159 83.0
Ca_15294_v3 Cicer arietinum L. HOM05D003429 ORTHO05D003873 1.8e-72 276.2 159 81.8
TWI63G1019 Tripterygium wilfordii HOM05D003429 ORTHO05D003873 1.8e-72 276.2 158 82.9
AUR62035521 Chenopodium quinoa HOM05D003429 ORTHO05D003873 2.3e-72 275.8 159 84.3
MBI19_g25231_MAGBIO Magnolia biondii HOM05D003429 ORTHO05D003873 3.0e-72 275.4 159 83.0
VMungo1309G0597 Vigna mungo HOM05D003429 ORTHO05D003873 3.0e-72 275.4 159 82.4
Medtr3g118040 Medicago truncatula HOM05D003429 ORTHO05D003873 3.9e-72 275.0 159 81.8
AT5G06120 Arabidopsis thaliana HOM05D003429 ORTHO05D003873 1.1e-71 273.5 159 83.0
PSO339G2530 Papaver somniferum HOM05D003429 ORTHO05D003873 1.1e-71 273.5 159 83.0
PSO384G1706 Papaver somniferum HOM05D003429 ORTHO05D003873 1.1e-71 273.5 159 83.0
AL6G16070 Arabidopsis lyrata HOM05D003429 ORTHO05D003873 2.6e-71 272.3 159 82.4
Psat5g001960 Pisum sativum HOM05D003429 ORTHO05D003873 2.6e-71 272.3 159 79.9
Actinidia37867 Actinidia chinensis HOM05D003429 ORTHO05D003873 3.3e-71 271.9 159 80.5
ATR0782G154 Amborella trichopoda HOM05D003429 ORTHO05D003873 3.3e-71 271.9 159 82.4
Sed0026988 Sechium edule HOM05D003429 ORTHO05D003873 3.3e-71 271.9 159 83.0
Atru.chr12.1194 Acer truncatum HOM05D003429 ORTHO05D003873 4.4e-71 271.6 159 82.4
TPR.G38508 Trifolium pratense HOM05D003429 ORTHO05D003873 5.7e-71 271.2 159 81.1
Sp6g36790 Schrenkiella parvula HOM05D003429 ORTHO05D003873 7.4e-71 270.8 159 81.1
Actinidia17975 Actinidia chinensis HOM05D003429 ORTHO05D003873 1.7e-70 269.6 159 79.9
Thhalv10012516m.g Eutrema salsugineum HOM05D003429 ORTHO05D003873 2.2e-70 269.2 159 80.5
Lj1g0005148 Lotus japonicus HOM05D003429 ORTHO05D003873 2.2e-70 269.2 159 81.1
HPP92_028707 Vanilla planifolia HOM05D003429 ORTHO05D003873 2.8e-70 268.9 159 81.1
Aa31LG11G7100 Aethionema arabicum HOM05D003429 ORTHO05D003873 3.7e-70 268.5 159 79.9
THA.LOC104816588 Tarenaya hassleriana HOM05D003429 ORTHO05D003873 4.8e-70 268.1 159 79.9
EL10Ac4g08832 Beta vulgaris HOM05D003429 ORTHO05D003873 8.2e-70 267.3 159 80.5
Lalb_Chr11g0061181 Lupinus albus HOM05D003429 ORTHO05D003873 1.1e-69 266.9 159 78.6
Aqoxy5G00851 Aquilegia oxysepala HOM05D003429 ORTHO05D003873 1.4e-69 266.5 159 80.5
DCAR_022673 Daucus carota HOM05D003429 ORTHO05D003873 1.4e-69 266.5 158 81.0
BraA02t04869Z Brassica rapa HOM05D003429 ORTHO05D003873 3.1e-69 265.4 159 79.2
CARHR206820 Cardamine hirsuta HOM05D003429 ORTHO05D003873 3.1e-69 265.4 159 78.6
Carub.0006s0499 Capsella rubella HOM05D003429 ORTHO05D003873 5.3e-69 264.6 159 79.2
CSS0009838 Camellia sinensis var. sinensis HOM05D003429 ORTHO05D003873 7.0e-69 264.2 159 79.2
BcaB05g21683 Brassica carinata HOM05D003429 ORTHO05D003873 1.2e-68 263.5 159 79.2
C02p02580 Brassica napus HOM05D003429 ORTHO05D003873 1.2e-68 263.5 159 79.2
BolC2t06224H Brassica oleracea HOM05D003429 ORTHO05D003873 1.2e-68 263.5 159 79.2
THA.LOC104826824 Tarenaya hassleriana HOM05D003429 ORTHO05D003873 2.6e-68 262.3 159 78.0
C09p70720 Brassica napus HOM05D003429 ORTHO05D003873 4.5e-68 261.5 159 78.0
BolC9t59828H Brassica oleracea HOM05D003429 ORTHO05D003873 5.9e-68 261.2 159 78.0
unitig_22.g5335 Utricularia gibba HOM05D003429 ORTHO05D003873 1.3e-67 260.0 159 78.6
Oeu013041.2 Olea europaea HOM05D003429 ORTHO05D003873 2.2e-67 259.2 166 78.3
BcaC06g32321 Brassica carinata HOM05D003429 ORTHO05D003873 2.9e-67 258.8 159 77.4
Aqoxy1G01517 Aquilegia oxysepala HOM05D003429 ORTHO05D003873 5.0e-67 258.1 159 77.4
FAN10G0722 Fragaria x ananassa HOM05D003429 ORTHO05D003873 8.5e-67 257.3 142 86.6
BraA10t45069Z Brassica rapa HOM05D003429 ORTHO05D003873 1.1e-66 256.9 159 76.1
A10p30310 Brassica napus HOM05D003429 ORTHO05D003873 3.2e-66 255.4 159 76.1
TWI53G2015 Tripterygium wilfordii HOM05D003429 ORTHO05D003873 3.2e-66 255.4 159 77.4
arahy.Tifrunner.gnm1.ann1.3RNG04 Arachis hypogaea HOM05D003429 ORTHO05D003873 7.2e-66 254.2 202 65.3
vmacro07588 Vaccinium macrocarpon HOM05D003429 ORTHO05D003873 2.1e-65 252.7 167 75.4
vmacro07757 Vaccinium macrocarpon HOM05D003429 ORTHO05D003873 2.1e-65 252.7 167 75.4
DCAR_013522 Daucus carota HOM05D003429 ORTHO05D003873 6.1e-65 251.1 158 75.9
GSVIVG01025856001 Vitis vinifera HOM05D003429 ORTHO05D003873 6.1e-65 251.1 159 74.2
Solyc01g056520.3 Solanum lycopersicum HOM05D003429 ORTHO05D003873 1.4e-64 250.0 159 76.1
Sopen01g020360 Solanum pennellii HOM05D003429 ORTHO05D003873 1.4e-64 250.0 159 76.1
Nitab4.5_0000211g0060 Nicotiana tabacum HOM05D003429 ORTHO05D003873 3.0e-64 248.8 159 76.1
Os03g0616700 Oryza sativa ssp. japonica HOM05D003429 ORTHO05D003873 3.0e-64 248.8 159 76.7
CDE07G0955 Ceratophyllum demersum HOM05D003429 ORTHO05D003873 2.0e-63 246.1 142 82.4
Peaxi162Scf00139g01028 Petunia axillaris HOM05D003429 ORTHO05D003873 4.4e-63 245.0 159 75.5
Glyma.10G104900 Glycine max HOM05D003429 ORTHO05D003873 7.4e-63 244.2 159 73.0
Lalb_Chr02g0156721 Lupinus albus HOM05D003429 ORTHO05D003873 1.7e-62 243.0 159 74.2
CBR_g30950 Chara braunii HOM05D003429 ORTHO05D003873 2.2e-62 242.7 159 71.1
SalBow5G1634 Salvia bowleyana HOM05D003429 ORTHO05D003873 2.2e-62 242.7 136 85.3
Medtr1g051125 Medicago truncatula HOM05D003429 ORTHO05D003873 8.2e-62 240.7 159 74.2
Pp3c5_25430 Physcomitrium patens HOM05D003429 ORTHO05D003873 1.1e-61 240.4 159 70.4
Pp3c5_25610 Physcomitrium patens HOM05D003429 ORTHO05D003873 1.1e-61 240.4 159 70.4
Ca_14866_v3 Cicer arietinum L. HOM05D003429 ORTHO05D003873 1.8e-61 239.6 159 73.6
Nitab4.5_0002094g0090 Nicotiana tabacum HOM05D003429 ORTHO05D003873 1.8e-61 239.6 167 72.5
TPR.G13799 Trifolium pratense HOM05D003429 ORTHO05D003873 1.8e-61 239.6 159 73.0
Psat6g086480 Pisum sativum HOM05D003429 ORTHO05D003873 3.1e-61 238.8 159 73.6
Phvul.007G243600 Phaseolus vulgaris HOM05D003429 ORTHO05D003873 5.3e-61 238.0 159 72.3
HPP92_028456 Vanilla planifolia HOM05D003429 ORTHO05D003873 7.0e-61 237.7 159 73.6
Zm00001eb278500 Zea mays HOM05D003429 ORTHO05D003873 1.6e-60 236.5 159 73.0
AUR62018433 Chenopodium quinoa HOM05D003429 ORTHO05D003873 5.9e-60 234.6 162 69.1
Hund24514 Selenicereus undatus HOM05D003429 ORTHO05D003873 1.7e-59 233.0 159 71.7
SMO367G0627 Selaginella moellendorffii HOM05D003429 ORTHO05D003873 6.5e-59 231.1 159 67.3
Sc13g0000830 Simmondsia chinensis HOM05D003429 ORTHO05D003873 1.9e-58 229.6 159 69.2
CAN.G114.9 Capsicum annuum HOM05D003429 ORTHO05D003873 3.2e-58 228.8 143 76.2
AUR62020999 Chenopodium quinoa HOM05D003429 ORTHO05D003873 5.2e-56 221.5 158 67.1
Mapoly0017s0001 Marchantia polymorpha HOM05D003429 ORTHO05D003873 1.5e-55 219.9 159 66.7
MapolyY_B0019 Marchantia polymorpha HOM05D003429 ORTHO05D003873 1.8e-53 213.0 159 62.9
Cpa.g.sc33.148 Carica papaya HOM05D003429 ORTHO05D003873 1.0e-51 207.2 151 68.2
EL10Ac3g07341 Beta vulgaris HOM05D003429 ORTHO05D003873 1.9e-50 203.0 158 64.6
PRCOL_00000821 Prasinoderma coloniale HOM05D003429 ORTHO05D003873 4.7e-49 198.4 159 61.0
QL07p014239 Quercus lobata HOM05D003429 ORTHO05D003873 1.3e-46 190.3 276 42.4
RhsimUnG0020700 Rhododendron simsii HOM05D003429 ORTHO05D003873 2.2e-46 189.5 159 66.7
MCO13G155 Micromonas commoda HOM05D003429 ORTHO05D003873 1.6e-44 183.3 163 56.4
Haze_02953 Corylus avellana HOM05D003429 ORTHO05D003873 8.9e-32 141.0 86 83.7
Ca_28163_v3 Cicer arietinum L. HOM05D003429 ORTHO05D003873 1.2e-31 140.6 86 73.3
Haze_02954 Corylus avellana HOM05D003429 ORTHO05D003873 1.9e-29 133.3 69 84.1
Actinidia14027 Actinidia chinensis HOM05D003429 ORTHO05D003873 2.7e-28 129.4 67 82.1
VMungo0720G3126 Vigna mungo HOM05D003429 ORTHO05D003873 5.1e-19 98.6 74 66.2
Lj9A653G52 Lonicera japonica HOM05D003429 ORTHO05D003873 7.3e-18 94.7 92 53.3
Cre02.g141506 Chlamydomonas reinhardtii HOM05D003429 ORTHO05D003873 1.6e-17 93.6 107 44.9
Actinidia13983 Actinidia chinensis HOM05D003429 ORTHO05D003873 1.4e-13 80.5 39 79.5


User provided reference genes

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