Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu055797.1 Olea europaea HOM05D006343 ORTHO05D005694 2.3e-154 548.9 279 100.0
Oeu035725.1 Olea europaea HOM05D003054 ORTHO05D003376 7.4e-97 357.8 244 73.0
Oeu035719.1 Olea europaea HOM05D003054 ORTHO05D003376 3.2e-92 342.4 254 68.9
Oeu035731.1 Olea europaea HOM05D006343 ORTHO05D005694 5.5e-76 288.5 288 58.7
Oeu035722.1 Olea europaea HOM05D006343 ORTHO05D005694 3.6e-67 259.2 286 55.2
SalBow6G3791 Salvia bowleyana HOM05D006343 ORTHO05D005694 2.0e-62 243.4 285 53.3
MSTRG.12522 Avicennia marina HOM05D006343 ORTHO05D005694 4.0e-58 229.2 291 51.5
MSTRG.18339 Avicennia marina HOM05D006343 ORTHO05D005694 6.7e-58 228.4 283 50.5
Dinv43841 Davidia involucrata HOM05D006343 ORTHO05D005694 1.2e-51 207.6 282 47.9
Oeu035728.1 Olea europaea HOM05D006343 ORTHO05D005694 5.2e-50 202.2 280 50.7
Actinidia20887 Actinidia chinensis HOM05D006343 ORTHO05D005694 5.5e-44 182.2 287 42.5
TAR629G3314 Trochodendron aralioides HOM05D006343 ORTHO05D005694 5.5e-44 182.2 288 43.8
Ciclev10021525m.g Citrus clementina HOM05D006343 ORTHO05D005694 2.1e-43 180.3 293 43.3
Hma1.2p1_0702F.1_g206150 Hydrangea macrophylla HOM05D006343 ORTHO05D005694 2.8e-43 179.9 288 44.4
Rhsim01G0164400 Rhododendron simsii HOM05D006343 ORTHO05D005694 4.0e-42 176.0 303 42.2
Sabra14G0063500 Salix brachista HOM05D006343 ORTHO05D005694 5.2e-42 175.6 308 42.2
Potri.014G087500 Populus trichocarpa HOM05D006343 ORTHO05D005694 8.8e-42 174.9 307 41.0
Cc02_g38320 Coffea canephora HOM05D006343 ORTHO05D005694 1.2e-41 174.5 295 40.7
Nitab4.5_0001655g0110 Nicotiana tabacum HOM05D006343 ORTHO05D005694 2.8e-40 169.9 319 38.6
CiPaw.02G033200 Carya illinoinensis HOM05D006343 ORTHO05D005694 4.1e-39 166.0 308 41.2
SGA_v2.0_scaffold1G00635 Striga asiatica HOM05D006343 ORTHO05D005694 7.0e-39 165.2 324 38.3
Potri.002G161700 Populus trichocarpa HOM05D006343 ORTHO05D005694 9.2e-39 164.9 310 42.3
GSVIVG01026998001 Vitis vinifera HOM05D006343 ORTHO05D005694 1.6e-38 164.1 302 41.4
Manes.01G254700 Manihot esculenta HOM05D006343 ORTHO05D005694 2.0e-38 163.7 310 40.3
Manes.05G031900 Manihot esculenta HOM05D006343 ORTHO05D005694 4.5e-38 162.5 305 40.0
Sabra02G0128600 Salix brachista HOM05D006343 ORTHO05D005694 3.8e-37 159.5 309 40.1
Nitab4.5_0003369g0030 Nicotiana tabacum HOM05D006343 ORTHO05D005694 5.0e-37 159.1 307 38.8
Nitab4.5_0002749g0010 Nicotiana tabacum HOM05D006343 ORTHO05D005694 8.6e-37 158.3 304 38.2
Prupe.2G173800 Prunus persica HOM05D006343 ORTHO05D005694 1.1e-36 157.9 298 40.6
CiPaw.01G064000 Carya illinoinensis HOM05D006343 ORTHO05D005694 2.5e-36 156.8 319 39.8
Nn1g01591 Nelumbo nucifera HOM05D006343 ORTHO05D005694 4.7e-35 152.5 311 36.7
vmacro20913 Vaccinium macrocarpon HOM05D006343 ORTHO05D005694 1.4e-34 151.0 318 40.6
Dinv32502 Davidia involucrata HOM05D006343 ORTHO05D005694 1.8e-34 150.6 233 43.3
Nitab4.5_0001040g0020 Nicotiana tabacum HOM05D006343 ORTHO05D005694 6.8e-34 148.7 319 38.6
Atru.chr5.528 Acer truncatum HOM05D006343 ORTHO05D005694 2.0e-33 147.1 295 40.7
Rhsim01G0164000 Rhododendron simsii HOM05D006343 ORTHO05D005694 3.4e-33 146.4 311 37.3
CSS0004449 Camellia sinensis var. sinensis HOM05D006343 ORTHO05D005694 5.7e-33 145.6 301 40.2
Lsat_1_v5_gn_7_4060 Lactuca sativa HOM05D006343 ORTHO05D005694 5.7e-33 145.6 306 35.0
CANSAT56G2487 Cannabis sativa HOM05D006343 ORTHO05D005694 4.9e-32 142.5 323 36.8
vmacro20912 Vaccinium macrocarpon HOM05D006343 ORTHO05D005694 1.3e-29 134.4 318 35.8
MD01G1067400 Malus domestica HOM05D006343 ORTHO05D005694 2.3e-29 133.7 314 36.0
Glyma.07G068200 Glycine max HOM05D006343 ORTHO05D005694 3.3e-28 129.8 315 36.5
Lsat_1_v5_gn_7_4100 Lactuca sativa HOM05D006343 ORTHO05D005694 3.3e-28 129.8 309 34.6
Rhsim06G0236200 Rhododendron simsii HOM05D006343 ORTHO05D005694 4.3e-28 129.4 296 38.2
QL04p054168 Quercus lobata HOM05D006343 ORTHO05D005694 7.3e-28 128.6 237 37.1
RcHm_v2.0_Chr1g0357021 Rosa chinensis HOM05D006343 ORTHO05D005694 9.5e-28 128.3 316 32.9
DCAR_015701 Daucus carota HOM05D006343 ORTHO05D005694 1.6e-27 127.5 282 36.2
Phvul.010G101000 Phaseolus vulgaris HOM05D006343 ORTHO05D005694 2.1e-27 127.1 295 35.9
VMungo0331G0061 Vigna mungo HOM05D006343 ORTHO05D005694 2.8e-27 126.7 296 36.8
FAN10G0914 Fragaria x ananassa HOM05D006343 ORTHO05D005694 3.6e-27 126.3 320 34.4
FAN10G3829 Fragaria x ananassa HOM05D006343 ORTHO05D005694 4.7e-27 125.9 320 34.1
FAN01G0301 Fragaria x ananassa HOM05D006343 ORTHO05D005694 8.0e-27 125.2 319 33.2
Eucgr.I00992 Eucalyptus grandis HOM05D006343 ORTHO05D005694 1.8e-26 124.0 316 37.0
CAN.G650.32 Capsicum annuum HOM05D006343 ORTHO05D005694 3.1e-26 123.2 329 32.2
FvH4_7g14870 Fragaria vesca HOM05D006343 ORTHO05D005694 5.2e-26 122.5 316 36.4
CAN.G650.25 Capsicum annuum HOM05D006343 ORTHO05D005694 8.9e-26 121.7 320 34.1
FAN06G0921 Fragaria x ananassa HOM05D006343 ORTHO05D005694 1.2e-25 121.3 319 33.2
Solyc02g070700.3 Solanum lycopersicum HOM05D006343 ORTHO05D005694 1.2e-25 121.3 313 35.8
unitig_22.g5289 Utricularia gibba HOM05D006343 ORTHO05D005694 1.2e-25 121.3 287 38.7
Lj3g0021957 Lotus japonicus HOM05D006343 ORTHO05D005694 1.5e-25 120.9 221 40.3
CDE02G1832 Ceratophyllum demersum HOM05D006343 ORTHO05D005694 2.6e-25 120.2 295 34.9
Aqoxy7G00256 Aquilegia oxysepala HOM05D006343 ORTHO05D005694 4.4e-25 119.4 330 33.3
FvH4_7g14980 Fragaria vesca HOM05D006343 ORTHO05D005694 4.4e-25 119.4 319 32.9
Duzib138G0695 Durio zibethinus HOM05D006343 ORTHO05D005694 9.8e-25 118.2 301 35.9
MD07G1133500 Malus domestica HOM05D006343 ORTHO05D005694 2.2e-24 117.1 312 34.3
FAN03G1905 Fragaria x ananassa HOM05D006343 ORTHO05D005694 2.9e-24 116.7 310 34.5
Sopen02g019780 Solanum pennellii HOM05D006343 ORTHO05D005694 3.7e-24 116.3 316 34.2
FAN03G1311 Fragaria x ananassa HOM05D006343 ORTHO05D005694 1.4e-23 114.4 323 36.2
FAN06G4353 Fragaria x ananassa HOM05D006343 ORTHO05D005694 1.9e-23 114.0 312 35.9
TWI23G0998 Tripterygium wilfordii HOM05D006343 ORTHO05D005694 1.9e-23 114.0 298 37.2
FAN10G3557 Fragaria x ananassa HOM05D006343 ORTHO05D005694 3.2e-23 113.2 319 37.6
CAN.G2424.1 Capsicum annuum HOM05D006343 ORTHO05D005694 4.1e-23 112.8 346 31.5
CAN.G650.35 Capsicum annuum HOM05D006343 ORTHO05D005694 4.1e-23 112.8 323 31.6
Lalb_Chr17g0339411 Lupinus albus HOM05D006343 ORTHO05D005694 7.0e-23 112.1 311 34.4
CsaV3_6G000720 Cucumis sativus L. HOM05D006343 ORTHO05D005694 9.2e-23 111.7 315 35.6
FAN06G0140 Fragaria x ananassa HOM05D006343 ORTHO05D005694 1.6e-22 110.9 309 35.9
COL.COLO4_12739 Corchorus olitorius HOM05D006343 ORTHO05D005694 3.5e-22 109.8 290 35.2
Cpa.g.sc11.35 Carica papaya HOM05D006343 ORTHO05D005694 2.3e-21 107.1 306 32.7
Glyma.16G034200 Glycine max HOM05D006343 ORTHO05D005694 3.9e-21 106.3 329 32.5
ECA233G1044 Erigeron canadensis HOM05D006343 ORTHO05D005694 1.5e-20 104.4 265 35.8
FAN10G3545 Fragaria x ananassa HOM05D006343 ORTHO05D005694 2.5e-20 103.6 356 34.3
DCAR_015699 Daucus carota HOM05D006343 ORTHO05D005694 7.3e-20 102.1 283 36.0
Migut.D00457 Erythranthe guttata HOM05D006343 ORTHO05D005694 7.3e-20 102.1 173 42.8
Gorai.007G101600 Gossypium raimondii HOM05D006343 ORTHO05D005694 9.5e-20 101.7 295 33.9
PGR042G0313 Punica granatum HOM05D006343 ORTHO05D005694 3.6e-19 99.8 179 37.4
CAN.G650.28 Capsicum annuum HOM05D006343 ORTHO05D005694 1.1e-18 98.2 235 32.8
Gohir.D11G095300 Gossypium hirsutum HOM05D006343 ORTHO05D005694 2.6e-17 93.6 300 34.0
Sed0018743 Sechium edule HOM05D006343 ORTHO05D005694 4.4e-17 92.8 293 35.2
Thhalv10028840m.g Eutrema salsugineum HOM05D012121 ORTHO05D005694 3.7e-16 89.7 322 31.1
THA.LOC104825850 Tarenaya hassleriana HOM05D012121 ORTHO05D005694 6.4e-16 89.0 337 27.6
CDE06G1281 Ceratophyllum demersum HOM05D006343 ORTHO05D005694 9.2e-15 85.1 184 32.6
FAN10G3360 Fragaria x ananassa HOM05D006343 ORTHO05D005694 1.2e-14 84.7 297 26.9
FAN06G3127 Fragaria x ananassa HOM05D006343 ORTHO05D005694 3.5e-14 83.2 301 26.6
FAN10G1634 Fragaria x ananassa HOM05D006343 ORTHO05D005694 1.0e-13 81.6 297 26.6
Duzib133G0920 Durio zibethinus HOM05D006343 ORTHO05D005694 5.1e-13 79.3 301 30.9
Thecc.01G356100 Theobroma cacao HOM05D006343 ORTHO05D005694 5.1e-13 79.3 288 31.6
Potri.014G099800 Populus trichocarpa HOM05D006343 ORTHO05D005694 6.6e-13 79.0 232 28.9
CARHR248400 Cardamine hirsuta HOM05D012121 ORTHO05D005694 8.6e-13 78.6 334 29.9
Cfa003895 Carpinus fangiana HOM05D006343 ORTHO05D005694 1.1e-12 78.2 290 32.8
FvH4_7g14880 Fragaria vesca HOM05D006343 ORTHO05D005694 1.5e-12 77.8 297 27.9
unitig_8.g3737 Utricularia gibba HOM05D006343 ORTHO05D005694 1.5e-12 77.8 295 29.5
PSO478G4526 Papaver somniferum HOM05D020029 ORTHO05D005694 3.3e-12 76.6 328 27.1
SGA_v2.0_scaffold138G35202 Striga asiatica HOM05D004007 ORTHO05D005127 3.3e-12 76.6 281 30.6
Actinidia10044 Actinidia chinensis HOM05D006343 ORTHO05D005694 4.3e-12 76.3 114 47.4
MELO3C021196.2 Cucumis melo HOM05D006343 ORTHO05D005694 5.6e-12 75.9 297 30.6
PSO478G0137 Papaver somniferum HOM05D020029 ORTHO05D005694 9.5e-12 75.1 285 31.9
TWI14G1134 Tripterygium wilfordii HOM05D006343 ORTHO05D005694 9.5e-12 75.1 294 31.6
Sc01g0003550 Simmondsia chinensis HOM05D006343 ORTHO05D005694 1.2e-11 74.7 280 31.1
EL10Ac1g00388 Beta vulgaris HOM05D029301 ORTHO05D005694 2.1e-11 73.9 307 30.3
PGSC0003DMG400008290 Solanum tuberosum HOM05D006343 ORTHO05D005694 2.8e-11 73.6 166 32.5
BcaB01g02239 Brassica carinata HOM05D012121 ORTHO05D005694 4.7e-11 72.8 324 28.1
Gohir.D08G153300 Gossypium hirsutum HOM05D006343 ORTHO05D005694 4.7e-11 72.8 293 31.7
FAN01G2602 Fragaria x ananassa HOM05D006343 ORTHO05D005694 6.2e-11 72.4 191 37.2
PSO782G1147 Papaver somniferum HOM05D020029 ORTHO05D005694 6.2e-11 72.4 207 32.4
Medtr3g015950 Medicago truncatula HOM05D006343 ORTHO05D005694 1.4e-10 71.2 296 30.1
Sp6g00380 Schrenkiella parvula HOM05D012121 ORTHO05D005694 1.8e-10 70.9 323 27.6
Medtr8g028845 Medicago truncatula HOM05D006343 ORTHO05D005694 5.2e-10 69.3 295 31.9
PSO782G1271 Papaver somniferum HOM05D020029 ORTHO05D005694 2.6e-09 67.0 188 27.7
HPP92_025479 Vanilla planifolia HOM05D049984 ORTHO05D020951 1.7e-08 64.3 252 29.0
PSO782G0031 Papaver somniferum HOM05D020029 ORTHO05D005694 2.2e-08 63.9 209 30.1
AT4G00310 Arabidopsis thaliana HOM05D012121 ORTHO05D005694 6.4e-08 62.4 331 26.9
ClCG06G003540 Citrullus lanatus HOM05D006343 ORTHO05D005694 1.1e-07 61.6 310 29.7
AL6G53170 Arabidopsis lyrata HOM05D012121 ORTHO05D005694 1.9e-07 60.8 326 27.6
HPP92_025480 Vanilla planifolia HOM05D049984 ORTHO05D020951 2.4e-07 60.5 278 25.9
Zm00001eb047010 Zea mays HOM05D024295 ORTHO05D020951 2.4e-07 60.5 325 25.5
Carub.0006s3693 Capsella rubella HOM05D012121 ORTHO05D005694 4.1e-07 59.7 326 27.3
FAN03G0040 Fragaria x ananassa HOM05D006343 ORTHO05D005694 4.1e-07 59.7 102 35.3
Zm00001eb222450 Zea mays HOM05D024295 ORTHO05D020951 4.1e-07 59.7 183 29.0
Gohir.A11G090700 Gossypium hirsutum HOM05D006343 ORTHO05D005694 5.4e-07 59.3 300 29.3
CAN.G526.2 Capsicum annuum HOM05D006343 ORTHO05D005694 7.1e-07 58.9 180 35.0
TPR.G17916 Trifolium pratense HOM05D006343 ORTHO05D005694 1.6e-06 57.8 48 62.5
Gohir.A08G131933 Gossypium hirsutum HOM05D006343 ORTHO05D005694 2.1e-06 57.4 86 43.0
Aa31LG5G640 Aethionema arabicum HOM05D012121 ORTHO05D005694 6.0e-06 55.8 57 47.4
FAN03G2349 Fragaria x ananassa HOM05D006343 ORTHO05D005694 6.0e-06 55.8 78 46.2
C09p00270 Brassica napus HOM05D012121 ORTHO05D005694 7.8e-06 55.5 332 25.0
Solyc03g095830.3 Solanum lycopersicum HOM05D064734 ORTHO05D005694 7.8e-06 55.5 283 25.1


User provided reference genes

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